Consolidate MaxQuant wrapper into run_maxquant.py + .gitignore#1
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jessegmeyerlab wants to merge 1 commit into
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Consolidate MaxQuant wrapper into run_maxquant.py + .gitignore#1jessegmeyerlab wants to merge 1 commit into
jessegmeyerlab wants to merge 1 commit into
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jessegmeyerlab
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Jul 13, 2026
jessegmeyerlab
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- Merge server.py logic into run_maxquant.py (parameter-file generation, FAIMS handling, version selection) and remove the redundant server.py.
- Build/instance script updates.
- Add .gitignore excluding Python artifacts, built .sif images, and the license-restricted MaxQuant and .NET binaries (must not be redistributed).
- Merge server.py logic into run_maxquant.py (parameter-file generation, FAIMS handling, version selection) and remove the redundant server.py. - Build/instance script updates. - Add .gitignore excluding Python artifacts, built .sif images, and the license-restricted MaxQuant and .NET binaries (must not be redistributed). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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