This is a public repository to organize information and documents pertaining to the development and testing of the Seattle Aquarium's BlueROV2
MOBS is a global, open-access database of standardized body size measurements for marine animal species.
R package for ecological niche analysis (subniche on CRAN). Refines OMI analysis for realized niche decomposition using marine and environmental data.
3D visualization framework using Unity
Code for Automated Detection of Antarctic Benthic Organisms in High-Resolution In Situ Imagery to Aid Biodiversity Monitoring (Trotter et. al, 2025)
OPC California MPA project
Comparison between eDNA and trawling for fish biodiversity metrics
SSRS RO15 - Coastal & Marine Research Group is a research group of IPB SSRS Association
Biodiversity_based_EFHs contains R scripts to model, map, and analyze community-based Essential Fish Habitat (EFH) patterns in the western Mediterranean Sea. It includes workflows for HMSC-derived abundance trends, hotspot/coldspot detection, and overlap with marine protected areas, with reproducible figure-generation scripts for manuscript outputs
Satellite-based causal attribution of coastal water clarity degradation to nickel smelting expansion at Indonesia's Morowali Industrial Park using Bayesian structural time series, multi-algorithm changepoint detection, and Sentinel-2 land cover intensity analysis.
Quarto ebook accompanying ESM R workshop
A Marine Fauna checklist localized to the Hawaii Exclusive Economic Zone
Artificial-Intelligence-Internet (Studi Kasus: Ekosistem & Budaya Maritim Indonesia)
In this repository live the bash, R and Julia scripts used to explore the microdiversity of the prokaryotic community at Uranouchi Inlet (42-sample time-series) by means of metagenomic shotgun sequencing under the supervision of the Ogata Lab.
Data and R code accompanying article 10.1002/aqc.3814 in Aquatic Conservation: Marine and Freshwater Ecosystems.
GAMM and ANN modelling for Viral Abundance Time Series
Hi, I'm Alex! A science communicator, podcast host, and marine biology storyteller.
Trophic roles of sharks and fish on French Polynesian coral reefs
Quarto website for the Save the Blue Five workshop on marine megafauna, species distribution models, and climate vulnerability in Galapagos
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