BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.
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Updated
Jan 29, 2024 - Jupyter Notebook
BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.
R interface for FDA Adverse Event Reporting System
Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.
Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data
Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.
Safety signal detection in pharmacological data (pharmacovigilance)
A real-time application that scrapes public health databases, employs NLP for content analysis, and alerts users about drug safety updates tailored to their preferences
A domain-specific language for clinical decision support and biotech workflow automation
AI-powered pharmacogenomic risk prediction system. Analyzes patient VCF files across 6 genes (CYP2D6, CYP2C19, CYP2C9, SLCO1B1, TPMT, DPYD) to predict drug-specific risks with CPIC-aligned recommendations and Gemini AI explanations.
Open-source pharmacovigilance engine for FDA adverse event signal detection. Provides validated statistical primitives (PRR, ROR, IC), MedDRA mapping, and reproducibility tools for drug safety research.
GLP-1临床试验风险预测系统
Personalized drug safety checker powered by GPT-4o and OpenFDA
AI system for detecting look-alike sound-alike (LASA) drug name errors using machine learning, NLP, and clinical context validation.
AI/ML project for predicting side effect risk score & recommending drug substitutions
Graph neural network for hERG channel inhibition prediction. K-fold cross-validation with focal loss and test-time augmentation.
MSc Clinical Drug Development Student | BSc Biomedical Science | Pharmacovigilance
Improving drug safety prediction using Explainable AI
Data repository for AMIA 2025 Paper Submission on PVLens
ClinicalTrials.gov processing pipeline
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