Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
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Apr 16, 2026 - Python
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cnmf
Here are 6 public repositories matching this topic...
Convolutive Matrix Factorization in Julia
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Mar 7, 2021 - Jupyter Notebook
Implementation of Project 3 for Data Science Practicum CSCI 8360 -- Neuron Segmentation. Datasets are from codeneuro website
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Mar 9, 2018 - Python
PKGBUILD of CaImAn for Archlinux
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Nov 2, 2017 - Shell
Unserpervised cNMF gene programs were used to ml-classify diabetic single-cells using LODO to deal with donor identity effects.
machine-learning supervised-learning unsupervised-learning transcriptomics single-cell cnmf random-forest-classifier
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Apr 10, 2026 - Python
A Nextflow pipline for running single cell post processing
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Apr 24, 2026 - Nextflow
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