Search results

arithmetic on a float field with missing values

Status: Open.

#301 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 20, 2026

bare flag identifier as the whole predicate

Status: Open.

Bug

#300 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 20, 2026

missing Number=A INFO field + numeric

Status: Open.

Bug

#299 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 20, 2026

Bug: incorrect behaviour for bcftools query with FORMAT scoped filters and sample subsetting

bugSomething isn't workingSomething isn't working

Status: Open.

#297 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 20, 2026

Initial VczReader API

Status: Open.

#291 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 17, 2026

·  

0.2.0

Complement-targeted regions fail on Windows + Python 3.11 (pyranges/sorted_nearest dtype bug)

Status: Open.

#290 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 17, 2026

Bug in VCF output when selected samples have all missing GTs.

bugSomething isn't workingSomething isn't working

Status: Open.

#289 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 16, 2026

Test wheel building

Status: Open.

#274 In sgkit-dev/vcztools;

· jeromekelleher opened on Apr 1, 2026

Document how to use vcztools with icechunk storage

Status: Open.

#257 In sgkit-dev/vcztools;

· tomwhite opened on Feb 4, 2026

Error message when decompressing .vcz data with vcztools

Status: Open.

#245 In sgkit-dev/vcztools;

· browning-lab opened on Dec 15, 2025

Document example of outputting to compressed VCF

Status: Open.

#244 In sgkit-dev/vcztools;

· hyanwong opened on Oct 30, 2025

Change argument to variant_iter to generic query?

Status: Open.

#240 In sgkit-dev/vcztools;

· jeromekelleher opened on Jun 27, 2025