Source code repository for the rachis Framework (the framework formerly known as the QIIME 2™ Framework).
Are you looking for:
- the project homepage? For now, that's still https://qiime2.org but we'll be migrating soon to rachis.org.
- an explanation of why we now call this framework
rachis, and how it is different from QIIME 2? See this announcement. (And don't worry, the QIIME 2 that you know and love is still alive and well!) - learning resources for microbiome marker gene (i.e., amplicon) analysis? See the QIIME 2 documentation.
- learning resources for microbiome metagenome analysis? See the MOSHPIT documentation.
- installation instructions, plugins, books, videos, workshops, or resources? See the QIIME 2 Library.
- general help? See the QIIME 2 Forum
- information about contributing? See the Contributing Guide.
- information about the developers? See the Caporaso Lab and Bokulich Lab websites.
If you use rachis, QIIME 2, or any rachis distributions for any published research, please cite Bolyen, Rideout, Dillon, Bokulich, et al. (2019).