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Update WSInfer links and instructions #174

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8d3b659
Update WSInfer links and instructions
alanocallaghan Feb 12, 2026
15a3e68
Installation and instanseg
alanocallaghan Feb 12, 2026
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2 changes: 1 addition & 1 deletion docs/deep/instanseg.md
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Expand Up @@ -24,7 +24,7 @@ Goldsborough, Thibaut, et al. A novel channel invariant architecture for the seg

## Requirements

- QuPath [version 0.6](https://qupath.github.io/) (installation instructions [here](https://qupath.readthedocs.io/en/0.4/docs/intro/installation.html))
- QuPath version 0.6 or later ([installation instructions](/docs/intro/installation.html))
- At least one whole slide image
- [Deep Java Library QuPath Extension](https://github.com/qupath/qupath-extension-djl)
- [InstanSeg QuPath Extension](https://github.com/qupath/qupath-extension-instanseg)
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4 changes: 2 additions & 2 deletions docs/deep/wsinfer.md
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Expand Up @@ -17,7 +17,7 @@ Kaczmarzyk, J.R., O’Callaghan, A., Inglis, F. et al. Open and reusable deep le

## Requirements

- QuPath [version 0.4](https://qupath.github.io/) (installation instructions [here](https://qupath.readthedocs.io/en/0.4/docs/intro/installation.html)).
- QuPath v0.6 or later ([installation instructions](https://qupath.readthedocs.io/en/stable/docs/intro/installation.html)).
- At least one whole slide image
- [WSInfer QuPath Extension](https://github.com/qupath/qupath-extension-wsinfer/releases)
- PyTorch (this can be downloaded while using the extension)
Expand All @@ -29,7 +29,7 @@ If you have an NVIDIA GPU and want to use it with WSInfer, you will need to inst

## Set-up

With QuPath installed and running, drag and drop the WSInfer extension into the application and restart QuPath.
With QuPath installed and running, use the [extension manager](/docs/intro/extensions) to install the WSInfer extension from the QuPath catalog.
Once installed, open up an image and run the extension via {menuselection}`Extensions --> WSInfer`.
You should see the window below:

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4 changes: 3 additions & 1 deletion docs/intro/installation.md
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@@ -1,5 +1,7 @@
# Installation

To install QuPath, you should first download the appropriate version for your operating system (more on that below) from the [QuPath website](https://qupath.github.io/).

QuPath isn't currently a signed application.
Over the past few years, security changes on Windows & Mac make installing any unsigned application a bit more difficult.
This page can help you navigate the challenges.
Expand Down Expand Up @@ -170,4 +172,4 @@ QuPath for Linux was compiled on Ubuntu - with best efforts made to include all

## Running from source

If all else fails, you can try [](building) - which should work on Windows, macOS and Linux.
If all else fails, you can try [](building) - which should work on Windows, macOS and Linux.