Popular repositories Loading

1. rnadeseq rnadeseq Public

   Differential gene expression analysis and pathway analysis of RNAseq data

   Nextflow 32 23

2. cellranger cellranger Public

   Nextflow pipeline wrapper for executing Cell Ranger

   Nextflow 13 2

3. vcftomaf vcftomaf Public

   Nextflow pipeline to convert VCF files into MAF files.

   Nextflow 10 5

4. t2pmhc t2pmhc Public

   t2pmhc: A Structure-Informed Graph Neural Network for Predicting TCR–pMHC Binding

   Python 5 1

5. root-tissue-analysis root-tissue-analysis Public

   Pipeline for pH analysis of A. thaliana root tissue

   Jupyter Notebook 4 1

6. icgc-featurecounts icgc-featurecounts Public

   Forked from apeltzer/IGCG-featureCounts

   A Nextflow pipeline to run featureCounts on RNAseq BAM files on ICGC in AWS/AWS Batch

   Nextflow 3 3