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    18 repositories

    • adaptiveqf

      Public
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •2•5•0•0•Updated Aug 20, 2025Aug 20, 2025

    • squeakr

      Public
      Squeakr: An Exact and Approximate k -mer Counting System
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •23•86•11•2•Updated Feb 23, 2025Feb 23, 2025

    • iceberghashtable

      Public
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •7•67•1•0•Updated Oct 25, 2024Oct 25, 2024

    • vqf

      Public
      A fast approximate membership query data structure
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •5•12•0•0•Updated Jul 16, 2024Jul 16, 2024

    • mantis

      Public
      Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •22•86•6•2•Updated Mar 7, 2024Mar 7, 2024

    • cqf

      Public
      A General-Purpose Counting Filter: Counting Quotient Filter
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •37•131•2•1•Updated Aug 3, 2023Aug 3, 2023

    • lerts

      Public
      C++
      •1•2•0•0•Updated Jul 7, 2021Jul 7, 2021

    • debgr

      Public
      deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •1•31•0•0•Updated Jan 19, 2021Jan 19, 2021

    • morton_filter

      Public
      A compressed, sparse cuckoo filter (see https://www.vldb.org/pvldb/vol11/p1041-breslow.pdf)
      C++
      •
      MIT License
      •17•0•0•0•Updated Jun 30, 2020Jun 30, 2020

    • rocksdb

      Public
      A library that provides an embeddable, persistent key-value store for fast storage.
      C++
      •
      GNU General Public License v2.0
      •6.8k•0•0•0•Updated May 7, 2020May 7, 2020

    • dafny

      Public
      Dafny is a verification-aware programming language
      C#
      •
      Other
      •314•0•0•0•Updated Jan 7, 2020Jan 7, 2020

    • kyoto

      Public
      Kyoto Tycoon key-value store (and the underlying Kyoto Cabinet library)
      C++
      •
      GNU General Public License v3.0
      •42•0•0•0•Updated Aug 17, 2019Aug 17, 2019

    • firehose

      Public
      The main purpose of the FireHose Streaming Benchmarks is to enable comparison of streaming software and hardware, both quantitatively vis-a-vis the rate at whic…
      Python
      •
      Other
      •7•0•0•0•Updated Nov 23, 2018Nov 23, 2018

    • partitionedcounter

      Public
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Nov 7, 2018Nov 7, 2018

    • rankselect

      Public
      Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences
      C++
      •
      Other
      •20•15•0•1•Updated Aug 7, 2018Aug 7, 2018

    • KMC

      Public
      Fast and frugal disk based k-mer counter
      C++
      •83•0•0•0•Updated Jul 30, 2017Jul 30, 2017

    • Sux

      Public
      Implementing Succinct Data Structures from Sebastiano Vigna(http://sux.di.unimi.it)
      C++
      •
      GNU Lesser General Public License v3.0
      •5•2•0•0•Updated Apr 29, 2017Apr 29, 2017

    • sdsl-lite

      Public
      Succinct Data Structure Library 2.0
      C++
      •
      Other
      •358•2•0•0•Updated Jan 30, 2017Jan 30, 2017
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