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@braindynamicslab brain dynamics lab @ stanford

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    18 repositories

    • braindynamicslab.github.io

      Public
      Lab's website
      0•0•0•1•Updated Apr 21, 2026Apr 21, 2026

    • dl-task-contrast-prediction

      Public
      Code for the work entitled "Predicting Task Activation Maps from Resting-State Functional Connectivity using Deep Learning"
      Jupyter Notebook
      •
      MIT License
      •0•3•0•0•Updated Jan 30, 2026Jan 30, 2026

    • dyneusr

      Public
      Dynamical Neuroimaging Spatiotemporal Representations (DyNeuSR)
      visualizationneuroimagingtopological-data-analysis
      visualizationneuroimagingtopological-data-analysisbrain-networksmapper-algorithmbrain-dynamics
      Python
      •
      BSD 3-Clause Clear License
      •17•53•11•2•Updated Nov 25, 2025Nov 25, 2025

    • sptmsfmri

      Public
      This repo holds the technical validation code for the Brain Dynamics Lab spTMS/fMRI study.
      Python
      •
      MIT License
      •0•1•0•0•Updated Feb 18, 2025Feb 18, 2025

    • rdoc-lfa

      Public
      Latent factor analysis for validating RDoC framework using task contrasts
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 22, 2025Jan 22, 2025

    • tda-msc-rsfMRI

      Public
      Code for analyzing MSC rsfMRI data using TDA
      MATLAB
      •
      BSD 3-Clause Clear License
      •3•3•1•0•Updated Oct 15, 2024Oct 15, 2024

    • sms

      Public
      Stanford Meditation Study
      0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • demapper

      Public
      deconstructed Mapper (deMapper) Toolbox for MATLAB
      Jupyter Notebook
      •
      Apache License 2.0
      •1•2•0•0•Updated Jul 7, 2024Jul 7, 2024

    • dyneusr-notebooks

      Public
      DyNeuSR notebooks and tutorials
      Jupyter Notebook
      •4•4•1•0•Updated Mar 13, 2024Mar 13, 2024

    • neumapper

      Public
      A scalable Mapper algorithm for neuroimaging data analysis
      neuroimagingtopological-data-analysisbrain-networks
      neuroimagingtopological-data-analysisbrain-networksmapper-algorithmbrain-dynamics
      MATLAB
      •
      BSD 3-Clause Clear License
      •1•8•0•0•Updated Mar 8, 2024Mar 8, 2024

    • tda-mito-networks

      Public
      MATLAB
      •0•0•0•0•Updated Jun 27, 2023Jun 27, 2023

    • tmapper

      Public
      For temporal mapper code
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •7•8•1•0•Updated Dec 6, 2022Dec 6, 2022

    • tda-metpro

      Public
      MATLAB
      •0•0•0•0•Updated Oct 29, 2022Oct 29, 2022

    • w3c

      Public
      MATLAB
      •1•3•0•0•Updated Aug 5, 2022Aug 5, 2022

    • cme-creativity

      Public
      code and data for continuous multitask experiment to anchor creativity into known cognitive constructs
      MATLAB
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 24, 2021Aug 24, 2021

    • fmri-hyperscan-3

      Public
      The collaborative 3-person Pictionary task is a multi-player version of the Pictionary game [1]. The goal of the task is to draw a verb independently and collec…
      HTML
      •0•1•0•0•Updated Aug 15, 2020Aug 15, 2020

    • dyneusr-fire

      Public
      A command line interface for DyNeuSR
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Aug 10, 2020Aug 10, 2020

    • indcon

      Public
      Code for extracting individual contribution from group Structural Covariance Matrices (SCM). See this article for more info - https://dx.doi.org/10.1016%2Fj.neu…
      MATLAB
      •
      GNU General Public License v3.0
      •2•3•0•0•Updated Aug 29, 2018Aug 29, 2018
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