Repositories list

• Supp_Redhai_Hirschmueller_2024

  Public
  supplementary material for Redhai Hirschmueller 2024

  HTML

  •11 fork•00 stars•00 issues•00 pull requests•Updated Feb 5, 2026Feb 5, 2026

• Supp_Funk_2021

  Public
  analysissingle-cellaging+ 3

  analysissingle-cellaginginflammationorganoidsintestine

  HTML

  •

  MIT License

  •22 forks•00 stars•11 issue•00 pull requests•Updated Sep 17, 2025Sep 17, 2025

• Supp_Schubert_2025

  Public
  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 11, 2025Jul 11, 2025

• Supp_Redhai_Wang_2023

  Public
  Supplemental code for publication "Rab35 restrains regional Wnt activation by regulating a Cdc42-JNK signalling relay in the intestine"

  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 12, 2025Mar 12, 2025

• Supp_Stahl_2024

  Public
  This repository contains all data and code to reproduce the figures in Stahl et al. (Collaboration w R. Bartenschlager)

  Visual Basic 6.0

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 12, 2024Jun 12, 2024

• Supp_Bageritz_2023

  Public
  Supplemental code for publication "Glyoxal as alternative fixative for single cell transcriptome experiments"

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 5, 2023Jul 5, 2023

• Supp_Prasad_2022

  Public
  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 13, 2023Jun 13, 2023

• Supp_Heigwer_2021

  Public
  The functional analysis of genes provides relevant information to understand cellular function. Further, the mapping of genetic interactions sheds light on how …

  signaling-pathwaysmorphological-analysisgenetic-interactions+ 2

  signaling-pathwaysmorphological-analysisgenetic-interactionssingle-cell-analysisgene-function

  HTML

  •

  MIT License

  •22 forks•00 stars•00 issues•00 pull requests•Updated May 17, 2023May 17, 2023

• cld

  Public
  A software for the multispecies design of CRISPR/Cas9 libraries

  Perl

  •

  GNU General Public License v2.0

  •1616 forks•3636 stars•44 issues•00 pull requests•Updated Oct 7, 2022Oct 7, 2022

• Supp_BetgeRindtorff_2021

  Public
  Repository for the paper "The drug-induced phenotypic landscape of colorectal cancer organoids"

  HTML

  •00 forks•88 stars•00 issues•00 pull requests•Updated Oct 5, 2022Oct 5, 2022

• Supp_Schubert_2021

  Public
  Rich Text Format

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 23, 2022Jun 23, 2022

• Supp_Bamberg_2021

  Public
  Supplemental materials, scripts and source data regarding the article "Targeting EHMT1/2 sensitizes colorectal cancer to pan-HDAC inhibitors"

  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 9, 2022Jun 9, 2022

• cld_docker

  Public
  Docker for CRISPR Library Designer | https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0915-2

  Perl

  •

  GNU General Public License v2.0

  •44 forks•2121 stars•1010 issues•00 pull requests•Updated May 30, 2022May 30, 2022

• Supp_Imkeller_2021

  Public
  HTML

  •

  GNU General Public License v3.0

  •00 forks•22 stars•00 issues•00 pull requests•Updated Apr 20, 2022Apr 20, 2022

• nextrnai

  Public
  nextrnai - a software package for the design of RNAi libraries

  Perl

  •44 forks•33 stars•00 issues•22 pull requests•Updated Feb 14, 2022Feb 14, 2022

• Supp_Neufeldt_2021

  Public
  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 15, 2021Dec 15, 2021

• Supplemental-Material

  Public
  Repository for supplemental material of manuscripts

  HTML

  •

  MIT License

  •1010 forks•1919 stars•11 issue•00 pull requests•Updated Jun 30, 2021Jun 30, 2021

• StyleGuide

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 13, 2021Jan 13, 2021

• CRISPRAnalyzeR

  Public
  CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

  HTML

  •

  GNU General Public License v2.0

  •2929 forks•8080 stars•2525 issues•00 pull requests•Updated May 21, 2020May 21, 2020

• SCOPE

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 15, 2019Jul 15, 2019

• boutroslab.github.io

  Public
  Boutroslab Github landing page

  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 17, 2019Jun 17, 2019

• HTSvis

  Public
  A web app for exploratory data analysis of high-throughput screens (HTS)

  R

  •

  GNU General Public License v3.0

  •44 forks•1717 stars•00 issues•00 pull requests•Updated Sep 19, 2018Sep 19, 2018

• web-cellhts2

  Public
  Repository for the web-cellHTS project (http://www.biomedcentral.com/1471-2105/11/185)

  Java

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 10, 2018Jun 10, 2018

• SFB1324

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 26, 2017May 26, 2017

• caRpools

  Public
  Exploratory data analysis for pooled CRISPR/Cas9 screens

  HTML

  •1212 forks•2121 stars•88 issues•00 pull requests•Updated Mar 6, 2017Mar 6, 2017

• BookingCal

  Public
  Solution for a web-based booking calendar for lab equipment

  JavaScript

  •11 fork•11 star•00 issues•00 pull requests•Updated Mar 8, 2013Mar 8, 2013