Repositories list

• test_data

  Public
  used to host data for automated testing

  Python

  •33 forks•00 stars•00 issues•11 pull request•Updated May 4, 2026May 4, 2026

• mrtrix3

  Public
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractogra…

  C++

  •

  Mozilla Public License 2.0

  •198198 forks•350350 stars•606606 issues•8080 pull requests•Updated May 4, 2026May 4, 2026

• script_test_data

  Public
  used to host data for testing of Python scripts

  Brainfuck

  •00 forks•11 star•00 issues•00 pull requests•Updated May 3, 2026May 3, 2026

• webgpu-dawn-binaries

  Public
  11 fork•00 stars•00 issues•00 pull requests•Updated Mar 27, 2026Mar 27, 2026

• MRtrix3.github.io

  Public
  Repository to hold the MRtrix3 website

  SCSS

  •33 forks•11 star•11 issue•00 pull requests•Updated Mar 10, 2026Mar 10, 2026

• mrpeek

  Public
  A medical image viewer in the terminal.

  C++

  •11 fork•3535 stars•1111 issues•11 pull request•Updated Feb 18, 2026Feb 18, 2026

• conda-build

  Public
  recipe to build anaconda / miniconda MRtrix3 package

  Shell

  •11 fork•00 stars•22 issues•00 pull requests•Updated Oct 21, 2025Oct 21, 2025

• fetch_changelog

  Public
  Used to automate the creation of a changelog based on merge commits

  Python

  •

  Mozilla Public License 2.0

  •00 forks•00 stars•11 issue•00 pull requests•Updated Oct 20, 2025Oct 20, 2025

• macos-installer

  Public
  Scripts to create installer for macOS

  Shell

  •11 fork•11 star•00 issues•11 pull request•Updated Apr 30, 2025Apr 30, 2025

• mrtrix3-with3p

  Public
  A containerised version of MRtrix3 that includes third-party neuroimaging commands invoked by MRtrix3 tools

  Mozilla Public License 2.0

  •00 forks•00 stars•44 issues•11 pull request•Updated Mar 12, 2025Mar 12, 2025

• containers

  Public
  Developer tools for generating minified containers for MRtrix3

  Dockerfile

  •22 forks•00 stars•44 issues•11 pull request•Updated Jan 19, 2025Jan 19, 2025

• workshop

  Public
  Containers for software workshop material consumption

  Dockerfile

  •00 forks•00 stars•44 issues•00 pull requests•Updated Nov 16, 2024Nov 16, 2024

• cmdline-tutorial

  Public
  Command-line tutorial

  Mozilla Public License 2.0

  •33 forks•00 stars•00 issues•00 pull requests•Updated Oct 7, 2024Oct 7, 2024

• mrtrix3-external-project-template

  Public
  00 forks•00 stars•11 issue•00 pull requests•Updated Aug 8, 2024Aug 8, 2024

• MinGW

  Public
  Shell

  •33 forks•00 stars•00 issues•00 pull requests•Updated Dec 15, 2022Dec 15, 2022

• developer-documentation

  Public
  Used purely to host MRtrix3's Doxygen-generated development documentation

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 4, 2022Jul 4, 2022

• DICOM_tests

  Public
  scripts to perform DICOM testing for MRtrix3 library

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 10, 2022Mar 10, 2022

• homebrew-mrtrix3

  Public
  homebrew formula to make installing mrtrix on OSX easier

  Ruby

  •00 forks•11 star•11 issue•00 pull requests•Updated Nov 29, 2021Nov 29, 2021

• script_test_action

  Public
  Requisite files for integration of Docker container-based testing of MRtrix3 Python scripts

  Dockerfile

  •00 forks•11 star•00 issues•00 pull requests•Updated Feb 8, 2021Feb 8, 2021

• MRtrix3_demo_code

  Public
  Demonstration code as included in the MRtrix3 NeuroImage 2019 paper.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 23, 2020Sep 23, 2020