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6 repositories

MORFAL
Public
Python
•0•0•0•0•Updated Apr 24, 2026Apr 24, 2026
SpliceLauncher
Public
RNAseq pipeline for alternative splicing junctions
rnaseq star bedtools
rnaseq star bedtools samtools gff genome-fasta alternative-junctions
R
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MIT License
•10•14•5•0•Updated Mar 26, 2026Mar 26, 2026
MAGIC
Public
Minigene Assembly and Generation of Isoform Combinations pipeline. Aucouturier, Camille et al. “Decipher RNA isoform combinations from minigene splicing assays …
Python
•
GNU General Public License v3.0
•0•1•0•0•Updated Nov 17, 2025Nov 17, 2025
SOSTAR
Public
iSofOrmS annoTAtoR pipeline Aucouturier, C., Soirat, N., Castéra, L. et al. Fine mapping of RNA isoform diversity using an innovative targeted long-read RNA seq…
longread rnaseq-pipeline
longread rnaseq-pipeline
Python
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GNU General Public License v3.0
•1•7•1•0•Updated Jan 19, 2025Jan 19, 2025
SPiP
Public
Splicing Prediction Pipeline
vcf spip splicing
vcf spip splicing
R
•
MIT License
•5•14•5•0•Updated Aug 12, 2023Aug 12, 2023
outLyzer
Public
An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice
Python
•6•0•0•0•Updated Jun 5, 2023Jun 5, 2023

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