HySonLab

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44 repositories

PointDistill
Public
Topology-Guided Knowledge Distillation for Efficient Point Cloud Processing
point-cloud self-driving-car persistent-homology
point-cloud self-driving-car persistent-homology lidar-point-cloud distillation point-cloud-segmentation point-transformer
Python
•1•9•1•0•Updated Apr 30, 2026Apr 30, 2026
LearnMMF
Public
Learning to Solve Multiresolution Matrix Factorization by Manifold Optimization and Evolutionary Metaheuristics
evolutionary-algorithms wavelet-transform graph-convolutional-network
evolutionary-algorithms wavelet-transform graph-convolutional-network graph-wavelet matrix-factorisation multiresolution-analysis stiefel-manifold-optimization directed-evolution
Python
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Other
•0•2•0•0•Updated Apr 17, 2026Apr 17, 2026
EquiHGNN
Public
Rotationally Equivariant Hypergraph Neural Networks (EquiHGNN)
density-functional-theory quantum-chemistry higher-order
density-functional-theory quantum-chemistry higher-order molecular-modeling graph-neural-networks hypergraph-neural-networks equivariant-representations molecular-property-prediction molecular-representation-learning equivariant-graph-neural-network
Python
•2•13•1•0•Updated Apr 8, 2026Apr 8, 2026
DiffPlace
Public
DiffPlace: A Conditional Diffusion Framework for Simultaneous VLSI Placement Beyond Sequential Paradigms
transfer-learning congestion vlsi-physical-design
transfer-learning congestion vlsi-physical-design performance-optimization diffusion-models generative-ai chip-placement
Python
•2•9•1•0•Updated Apr 7, 2026Apr 7, 2026
Q-BIOLAT
Public
Binary Latent Protein Fitness Landscapes for Quantum Annealing Optimization
protein quantum-computing protein-design
protein quantum-computing protein-design quantum-annealing qubo protein-fitness-prediction protein-language-model protein-optimization
Python
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MIT License
•0•2•0•0•Updated Mar 31, 2026Mar 31, 2026
Q-BIOLAT-Extended
Public
Q-BioLat: Binary Latent Protein Fitness Landscapes for QUBO-Based Optimization
genetic-algorithm quantum-computing drug-discovery
genetic-algorithm quantum-computing drug-discovery simulated-annealing quantum-annealing qubo greedy-hill-climbing protein-fitness-prediction protein-language-model protein-optimization
Python
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MIT License
•0•2•1•0•Updated Mar 31, 2026Mar 31, 2026
EvoSynth
Public
EvoSynth: Enabling Multi-Target Drug Discovery through Latent Evolutionary Optimization and Synthesis-Aware Prioritization
evolutionary-algorithms drug-discovery multi-objective-optimization
evolutionary-algorithms drug-discovery multi-objective-optimization geometric-deep-learning molecule-generation generative-ai
Jupyter Notebook
•0•7•0•0•Updated Mar 26, 2026Mar 26, 2026
Polymers
Public
Multimodal Machine Learning for Soft High-k, Low-Modulus Polymers under Data Scarcity
machine-learning materials-science multimodal-deep-learning
machine-learning materials-science multimodal-deep-learning graph-neural-networks polymers sequence-learning constrastive-learning molecular-property-prediction
Python
•0•3•1•0•Updated Mar 18, 2026Mar 18, 2026
PHAROS-AIF-MIH
Public
Halfway to 3D: Ensembling 2.5D and 3D Models for Robust COVID-19 CT Diagnosis
ensemble-learning 3d-resnet robust-machine-learning
ensemble-learning 3d-resnet robust-machine-learning contrastive-learning dinov3 ct-image-classification
Jupyter Notebook
•0•2•0•0•Updated Mar 18, 2026Mar 18, 2026
AgentIoT
Public
Self-Evolving Multi-Agent Network for Industrial IoT Predictive Maintenance
cloud-computing multi-agent-systems iot-application
cloud-computing multi-agent-systems iot-application agentic-ai
Jupyter Notebook
•1•2•0•0•Updated Feb 20, 2026Feb 20, 2026
ML4Insects
Public
Machine Learning for Automated Electrical Penetration Graph Analysis of Aphid Feeding Behavior: Accelerating Research on Insect-Plant Interactions
machine-learning signal-processing time-series-analysis
machine-learning signal-processing time-series-analysis fourier-transform wavelet-transform
Jupyter Notebook
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MIT License
•3•13•1•0•Updated Feb 18, 2026Feb 18, 2026
LINKER
Public
LINKER: Learning Interactions Between Functional Groups and Residues With Chemical Knowledge-Enhanced Reasoning and Explainability
machine-learning bioinformatics deep-learning
machine-learning bioinformatics deep-learning artificial-intelligence neural-networks drug-discovery protein-ligand-interactions protein-ligand-binding-affinity molecular-modeling explainable-ai
Jupyter Notebook
•1•8•0•0•Updated Feb 18, 2026Feb 18, 2026
TeBaAb
Public
TeBaAb: Text-Based Antigen-Conditioned Antibody Redesign via Directed Evolution
natural-language-processing evolutionary-algorithm protein-design
natural-language-processing evolutionary-algorithm protein-design variational-autoencoder protein-language-model directed-evolution antibody-design binding-affinity-prediction
Python
•0•4•0•0•Updated Feb 8, 2026Feb 8, 2026
Directed_Evolution
Public
Protein Design by Machine Learning guided Directed Evolution
proteins protein-design large-language-models
proteins protein-design large-language-models directed-evolution
Python
•
GNU General Public License v3.0
•6•48•0•0•Updated Jan 1, 2026Jan 1, 2026
BioMedKG
Public
Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs
knowledge-graph drug-repurposing link-prediction
knowledge-graph drug-repurposing link-prediction multimodal-learning constrastive-learning biomedical-knowledge-graph multimodal-knowledge-graph
Python
•5•32•0•0•Updated Dec 8, 2025Dec 8, 2025
WaveletPE
Public
Range-aware Graph Positional Encoding via High-order Pretraining: Theory and Practice
high-order wavelet-transform graph-wavelets
high-order wavelet-transform graph-wavelets graph-neural-networks graph-representation-learning graph-auto-encoder multiresolution-analysis graph-pretraining
Python
•1•2•0•0•Updated Nov 12, 2025Nov 12, 2025
TESGraph
Public
TESGNN: 3D Temporal Equivariant Scene Graph Neural Networks (published at TMLR)
point-cloud scene-graph multi-view-learning
point-cloud scene-graph multi-view-learning scene-understanding graph-neural-networks equivariant-representations temporal-graph-learning equivariant-graph-neural-network
Jupyter Notebook
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Other
•0•14•1•0•Updated Nov 2, 2025Nov 2, 2025
LightMed
Public
FFTMed: leveraging fast-fourier transform for a lightweight and adversarial-resilient medical image segmentation framework (published at Scientific Reports - Na…
medical-imaging convolutional-neural-networks medical-image-processing
medical-imaging convolutional-neural-networks medical-image-processing fourier-transform adversarial-attacks medical-image-segmentation light-weight-network
Python
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MIT License
•3•11•0•0•Updated Oct 29, 2025Oct 29, 2025
AdaptFNO
Public
AdaptFNO: Adaptive Fourier Neural Operator with Dynamic Spectral Modes and Multiscale Learning
adaptive-learning partial-differential-equations fft
adaptive-learning partial-differential-equations fft pde multiscale fourier-neural-operator pdebench
Python
•1•6•0•0•Updated Sep 27, 2025Sep 27, 2025
ArcRoute
Public
Hierarchical Directed Capacitated Arc Routing Problem (HDCARP)
reinforcement-learning evolutionary-algorithms ant-colony-optimization
reinforcement-learning evolutionary-algorithms ant-colony-optimization heuristics routing-algorithm routing-problem arc-routing
Python
•2•11•0•1•Updated Sep 27, 2025Sep 27, 2025
VietMedKG
Public
VietMedKG: Knowledge Graph and Benchmark for Traditional Vietnamese Medicine
knowledge-graph question-answering vietnamese-language
knowledge-graph question-answering vietnamese-language traditional-chinese-medicine retrieval-augmented-generation
Python
•1•9•0•0•Updated Jul 24, 2025Jul 24, 2025
FactAgent
Public
Towards Robust Fact-Checking: A Multi-Agent System with Advanced Evidence Retrieval
fact-checking multi-agent-systems explainable-ai
fact-checking multi-agent-systems explainable-ai large-language-models misinformation-detection
Python
•5•11•1•0•Updated Jun 24, 2025Jun 24, 2025
DrugPipe
Public
DrugPipe: Generative artificial intelligence-assisted virtual screening pipeline for generalizable and efficient drug repurposing
protein drug-discovery drug-repurposing
protein drug-discovery drug-repurposing protein-binding molecule-generation generative-ai
Python
•5•18•0•0•Updated Jun 9, 2025Jun 9, 2025
MatCPP
Public
Efficient Matheuristics for Solving the Chinese Postman Problem with Load Constraints
heuristics operations-research mixed-integer-programming
heuristics operations-research mixed-integer-programming chinese-postman-problem matheuristics
C++
•0•1•0•0•Updated May 15, 2025May 15, 2025
MGVAE
Public
Higher-order permutation-equivariant graph variational autoencoder to generate molecules in multiresolution manner. https://iopscience.iop.org/article/10.1088/…
variational-autoencoder graph-neural-networks molecule-generation
variational-autoencoder graph-neural-networks molecule-generation generative-ai
Python
•1•3•0•0•Updated May 12, 2025May 12, 2025
Design2Code
Public
Large Language Model in combination with Large Vision Model for the task of code generation given design sketch.
website-generation code-generation multimodal
website-generation code-generation multimodal graph-representation-learning multimodal-graphs visual-understanding vision-language-models
Python
•3•11•0•0•Updated Apr 29, 2025Apr 29, 2025
LatentDE
Public
LatentDE: Latent-based Directed Evolution for Protein Sequence Design
evolutionary-algorithm gradient-ascent variational-autoencoder
evolutionary-algorithm gradient-ascent variational-autoencoder protein-language-model directed-evolution protein-optimization
Python
•
GNU General Public License v3.0
•2•38•0•0•Updated Apr 2, 2025Apr 2, 2025
MultiscaleHSI
Public
Multiscale spectral graph neural networks for hyperspectral imaging
image-segmentation hyperspectral-imaging graph-neural-networks
image-segmentation hyperspectral-imaging graph-neural-networks multiscale-resolution
Python
•2•5•1•0•Updated Feb 25, 2025Feb 25, 2025
LANTERN
Public
LANTERN: Leveraging Large Language Models And Transformer For Enhanced Molecular Interaction
transformer protein-protein-interaction protein-ligand-interactions
transformer protein-protein-interaction protein-ligand-interactions protein-language-model molecular-interactions large-language-models molecule-descriptors
Python
•
MIT License
•1•3•1•0•Updated Feb 16, 2025Feb 16, 2025
Protein_Redesign
Public
ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models
protein protein-design protein-representation-learning
protein protein-design protein-representation-learning diffusion-models ligand-binding equivariant-network
Python
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MIT License
•8•39•0•0•Updated Nov 25, 2024Nov 25, 2024

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