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We will use `snakemake`'s kubernetes executor: https://snakemake.github.io/snakemake-plugin-catalog/plugins/executor/kubernetes.html along with namespace's kubernetes cluster support: - https://namespace.so/docs/reference/github-actions/nscloud-cluster-action to run our snakemake setup directly on snakemake. The open question for me is where this will store the build artifact. Currently, our evaluation run uploads a ZIP file to Zulip. We can upload this ZIP file as a build artifact on GH.
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…running the action I care about
…running the action I care about
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chore: move lake cache to before
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!blase |
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!blase |
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We will use
snakemake's kubernetes executor:https://snakemake.github.io/snakemake-plugin-catalog/plugins/executor/kubernetes.html
along with namespace's kubernetes cluster support:
to run our snakemake setup directly on snakemake.
The open question for me is where this will store the build artifact. Currently, our evaluation run uploads a ZIP file to Zulip. We can upload this ZIP file as a build artifact on GH.