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Pull requests: nextstrain/ncov

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Pull requests list

Remove Nextstrain profiles
#1197 opened Mar 24, 2026 by victorlin Member Loading…
@victorlin
feat: use nightly nextclade tree
#1170 opened Jan 28, 2025 by ivan-aksamentov Member Loading…
2 of 6 tasks
3
Add a map of Nextstrain clade to Pango lineage
#1159 opened Oct 23, 2024 by huddlej Contributor Loading…
4 tasks
3
Demo prefilter rule for Nextstrain GISAID build
#1128 opened Jul 25, 2024 by huddlej Contributor Loading…
4 tasks
8
inline root sequence
#1111 opened May 30, 2024 by rneher Member Loading…
Document example accepted docker image formats for action
#1105 opened May 3, 2024 by victorlin Member Loading…
1
@victorlin
Include profile for open 21L builds
#1101 opened Mar 9, 2024 by trvrb Member Loading…
1 task done
1
Update Suffolk lat/long
#1100 opened Feb 27, 2024 by joverlee521 Contributor Loading…
Introduce minimum augur version check
#1070 opened May 16, 2023 by jameshadfield Member Loading…
3
Allow specification of container image in workflow rebuild-100k.yml
#1067 opened May 5, 2023 by corneliusroemer Member Loading…
2
Soft-mask (just for topology) 486P site 23018
#1060 opened Apr 11, 2023 by corneliusroemer Member Loading…
4 tasks
2
Allow a list of sequence exclusion files, instead of just one
#977 opened Jul 11, 2022 by sacundim Loading…
1
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