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Refactor apply_transform workflow for per moving image execution#48

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zh320 wants to merge 3 commits into
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transform
Open

Refactor apply_transform workflow for per moving image execution#48
zh320 wants to merge 3 commits into
devfrom
transform

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@zh320 zh320 commented May 21, 2026

This PR refactors the apply_transform workflow to process one moving image per execution instead of batching multiple inputs in a single run.

Updated workflow

  • Refactor apply_transform to single moving image execution.
  • Split apply_transform snakefile rules for file/tif and n5 outputs.

Closes #40

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