Add process DAG (workflow step 02)

hpai-challenge/notes/references.bib

@@ -119,3 +119,44 @@ @article{Savill2006
   doi = {10.1038/442757a}
 }
 
+@article{Boender2023,
+  author = {Boender, Gert Jan and Hagenaars, Thomas J.},
+  title = {Common features in spatial livestock disease transmission parameters},
+  journal = {Scientific Reports},
+  year = {2023},
+  volume = {13},
+  pages = {3550},
+  doi = {10.1038/s41598-023-30230-w}
+}
+
+@article{Seymour2021,
+  author = {Seymour, Rowland G. and Kypraios, Theodore and O'Neill, Philip D. and Hagenaars, Thomas J.},
+  title = {A {Bayesian} Nonparametric Analysis of the 2003 Outbreak of Highly Pathogenic Avian Influenza in the {Netherlands}},
+  journal = {Journal of the Royal Statistical Society Series C (Applied Statistics)},
+  year = {2021},
+  volume = {70},
+  number = {5},
+  pages = {1323--1343},
+  doi = {10.1111/rssc.12515}
+}
+
+@article{Smith2015,
+  author = {Smith, Jacqueline and Smith, Nikki and Yu, Le and Paton, Ian R. and Gutowska, Maria Weronika and Forrest, Heather L. and Danner, Angela F. and Seiler, J. Patrick and Digard, Paul and Webster, Robert G. and Burt, David W.},
+  title = {A comparative analysis of host responses to avian influenza infection in ducks and chickens highlights a role for the interferon-induced transmembrane proteins in viral resistance},
+  journal = {BMC Genomics},
+  year = {2015},
+  volume = {16},
+  pages = {574},
+  doi = {10.1186/s12864-015-1778-8}
+}
+
+@article{PantinJackwood2013,
+  author = {Pantin-Jackwood, Mary J. and Swayne, David E. and Smith, Diane and Shepherd, Eric},
+  title = {Effect of species, breed and route of virus inoculation on the pathogenicity of {H5N1} highly pathogenic influenza ({HPAI}) viruses in domestic ducks},
+  journal = {Veterinary Research},
+  year = {2013},
+  volume = {44},
+  pages = {62},
+  doi = {10.1186/1297-9716-44-62}
+}
+