Release version 1.0.1

AMDAT 1.0.1 — 2025-10-31

Maintenance release with cleaner versioning, lighter checkouts, and small doc/CI improvements.

Highlights

• Automated versioning & build banner. Replaced the hand-edited src/version.h with a generated header and a small banner module so every tool prints consistent build metadata (name, SemVer, git describe/commit/branch, compiler, OpenMP). A VERSION file provides a no-git fallback for source archives.
• Slimmer repo checkout. src/qvectors/ now ships as a single qvectors.zip that the Makefile unpacks at build time. This cuts file count substantially.
• Docs refresh. README intro clarified; several manual pages added/updated (e.g., Manual/find_between.md, structure-factor notes, trajectory-decay doc). Legacy .docx manual removed.
• CI & hygiene. New GitHub Actions for conda build and version checks; issue templates for cleaner bug/feature intake.

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Selected changelog

• Bump version to 1.0.1.
• Add VERSION fallback; replace stale version.h with generated header across the codebase; add banner output.
• Add build/conda and version-check GitHub Actions; iterative fixes for conda resolution.
• Package qvectors as qvectors.zip; add unzip logic; fix stamp edge case.
• Docs: new find_between page & assets; structure-factor clarifications; README enhancements.
• Repo hygiene: issue templates; CITATION.cff touch-ups; remove legacy .docx.
• Includes ~50–60 commits such as: “Add VERSION file…”, “more robust build with automated version.h builder”, “Test CI workflows…”, “set up qvectors.zip…”, “fix qvectors unzip when dirs missing”, “Update structure_factor.md…”, “Update trajectory_list_decay.md…”, “Delete old manual docx”, and the final “Bump version to 1.0.1”.