Skip malformed CSV lines in WikiInfo parser

[prashantkumarniraj]

Malformed rows in wikipedias.csv are now logged and skipped instead of
throwing exceptions and aborting the download process.

Fixes #831

Summary by CodeRabbit

• Bug Fixes

  • Improved robustness of data parsing to gracefully skip malformed entries instead of failing extraction
  • Enhanced handling of missing or invalid data sources with fallback behavior

• Chores

  • Added detailed logging for debugging and troubleshooting data extraction issues

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Caution

Review failed

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📝 Walkthrough

Walkthrough

Two files are updated to improve robustness when handling malformed input. WikiInfo.scala refactors CSV parsing to validate fields, handle malformed lines gracefully, and log issues instead of throwing exceptions. ExtractionManager.scala updates namespace handling to use optional logic and log warnings when namespaces are unavailable, rather than failing.

Changes

Cohort / File(s)	Summary
CSV Parsing Robustness core/src/main/scala/org/dbpedia/extraction/util/WikiInfo.scala	Enhanced defensive parsing with explicit validation of field count, language codes, and pages field. Malformed lines are now logged and skipped rather than throwing exceptions. Control flow refactored to accumulate results in ArrayBuffer before returning.
Namespace Handling server/src/main/scala/org/dbpedia/extraction/server/ExtractionManager.scala	loadMappingPages refactored to use optional namespace with graceful fallback. Missing namespaces and file loading failures now log warnings and return empty maps instead of propagating errors. Updated local file path construction and logging messaging.

Estimated code review effort

🎯 3 (Moderate) | ⏱️ ~20 minutes

🚥 Pre-merge checks | ✅ 4 | ❌ 1

❌ Failed checks (1 inconclusive)

Check name	Status	Explanation	Resolution
Out of Scope Changes check	❓ Inconclusive	Changes to ExtractionManager.scala regarding namespace mapping handling appear related but may extend beyond the primary issue #831 about CSV parsing.	Verify that the ExtractionManager changes are necessary to fully resolve issue #831 or consider separating them into a follow-up PR.

✅ Passed checks (4 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title check	✅ Passed	The title accurately summarizes the main change: making the WikiInfo CSV parser skip malformed lines instead of throwing exceptions.
Linked Issues check	✅ Passed	The PR successfully addresses issue #831 by implementing robust CSV parsing with logging for malformed lines and skipping them instead of throwing exceptions.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.

_{✏️ Tip: You can configure your own custom pre-merge checks in the settings.}

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[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

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Error details

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ExtractionManager.scala updates namespace handling to use optional logic and log warnings when namespaces are unavailable, rather than failing.\n\n## Changes\n\n|Cohort / File(s)|Summary|\n|---|---|\n|**CSV Parsing Robustness** <br> `core/src/main/scala/org/dbpedia/extraction/util/WikiInfo.scala`|Enhanced defensive parsing with explicit validation of field count, language codes, and pages field. Malformed lines are now logged and skipped rather than throwing exceptions. Control flow refactored to accumulate results in ArrayBuffer before returning.|\n|**Namespace Handling** <br> `server/src/main/scala/org/dbpedia/extraction/server/ExtractionManager.scala`|loadMappingPages refactored to use optional namespace with graceful fallback. Missing namespaces and file loading failures now log warnings and return empty maps instead of propagating errors. Updated local file path construction and logging messaging.|\n\n## Estimated code review effort\n\n🎯 3 (Moderate) | ⏱️ ~20 minutes\n\n</details>\n\n<!-- walkthrough_end -->\n\n\n<!-- pre_merge_checks_walkthrough_start -->\n\n<details>\n<summary>🚥 Pre-merge checks | ✅ 4 | ❌ 1</summary>\n\n<details>\n<summary>❌ Failed checks (1 inconclusive)</summary>\n\n|         Check name         | Status         | Explanation                                                                                                                                            | Resolution                                                                                                                           |\n| :------------------------: | :------------- | :----------------------------------------------------------------------------------------------------------------------------------------------------- | :----------------------------------------------------------------------------------------------------------------------------------- |\n| Out of Scope Changes check | ❓ Inconclusive | Changes to ExtractionManager.scala regarding namespace mapping handling appear related but may extend beyond the primary issue `#831` about CSV parsing. | Verify that the ExtractionManager changes are necessary to fully resolve issue `#831` or consider separating them into a follow-up PR. |\n\n</details>\n<details>\n<summary>✅ Passed checks (4 passed)</summary>\n\n|      Check name     | Status   | Explanation                                                                                                                                                    |\n| :-----------------: | :------- | :------------------------------------------------------------------------------------------------------------------------------------------------------------- |\n|  Description Check  | ✅ Passed | Check skipped - CodeRabbit’s high-level summary is enabled.                                                                                                    |\n|     Title check     | ✅ Passed | The title accurately summarizes the main change: making the WikiInfo CSV parser skip malformed lines instead of throwing exceptions.                           |\n| Linked Issues check | ✅ Passed | The PR successfully addresses issue `#831` by implementing robust CSV parsing with logging for malformed lines and skipping them instead of throwing exceptions. |\n|  Docstring Coverage | ✅ Passed | No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.                                                     |\n\n</details>\n\n<sub>✏️ Tip: You can configure your own custom pre-merge checks in the settings.</sub>\n\n</details>\n\n<!-- pre_merge_checks_walkthrough_end -->\n\n<!-- finishing_touch_checkbox_start -->\n\n<details>\n<summary>✨ Finishing touches</summary>\n\n<details>\n<summary>🧪 Generate unit tests (beta)</summary>\n\n- [ ] <!-- {\"checkboxId\": \"f47ac10b-58cc-4372-a567-0e02b2c3d479\", \"radioGroupId\": \"utg-output-choice-group-unknown_comment_id\"} -->   Create PR with unit tests\n- [ ] <!-- {\"checkboxId\": \"07f1e7d6-8a8e-4e23-9900-8731c2c87f58\", \"radioGroupId\": \"utg-output-choice-group-unknown_comment_id\"} -->   Post copyable unit tests in a comment\n\n</details>\n\n</details>\n\n<!-- finishing_touch_checkbox_end -->\n\n<!-- announcements_start -->\n\n> [!TIP]\n> We've launched [Issue Planner](https://www.coderabbit.ai/issue-planner) and it is currently in beta. 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