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7 changes: 3 additions & 4 deletions docs/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -92,7 +92,7 @@ Several workflow engines have implemented the [WRROC profiles](https://www.resea
[WfExS](https://wfexs-backend.readthedocs.io/) | Workflow | [WfExS 0.10.1](https://github.com/inab/WfExS-backend/releases/tag/0.10.1) or later | [10.5281/zenodo.10091550](https://doi.org/10.5281/zenodo.10091550) |
[Sapporo](https://github.com/sapporo-wes/sapporo) | Workflow | [sapporo-service 1.5.1](https://github.com/sapporo-wes/sapporo-service/releases/tag/1.5.1) or later | [10.5281/zenodo.10134581](https://doi.org/10.5281/zenodo.10134581) |
[Autosubmit](https://autosubmit.readthedocs.io/) | Workflow | [Autosubmit v4.0.100](https://pypi.org/project/autosubmit/4.0.100/) or later | [10.5281/zenodo.8144612](https://doi.org/10.5281/zenodo.8144612) |
[Nextflow](https://nextflow.io/) | Provenance | ([nf-prov](https://github.com/nextflow-io/nf-prov/blob/main/docs/WRROC.md) 1.4.0 or later | [example](https://github.com/nextflow-io/nf-prov/files/13070992/ro-crate-metadata.json) |
[Nextflow](https://nextflow.io/) | Provenance | [nf-prov](https://github.com/nextflow-io/nf-prov/blob/main/docs/WRROC.md) 1.4.0 or later | [example](https://github.com/nextflow-io/nf-prov/files/13070992/ro-crate-metadata.json) |

The Process Crate profile can also be implemented outside workflow systems, see for example [BY-COVID WP5 T5.2 Baseline Use Case](https://w3id.org/ro/doi/10.5281/zenodo.6913045) and [combination with Common Provenance Model](https://doi.org/10.5281/zenodo.7676923). Editors like [Crate-O](https://language-research-technology.github.io/crate-o/) can be used for making such crates by hand.

Expand Down Expand Up @@ -121,8 +121,8 @@ In addition, some computational workflow approaches have RO-Crate support which
### RO-Crate links

- [RO-Crate homepage](https://w3id.org/ro/crate)
- [RO-Crate specification 1.1](https://www.researchobject.org/ro-crate/1.1/)
- [RO-Crate profiles](https://www.researchobject.org/ro-crate/1.2-DRAFT/profiles) (from 1.2-DRAFT -- feedback welcome)
- [RO-Crate specification 1.2](https://www.researchobject.org/ro-crate/1.2/)
- [RO-Crate profiles](https://www.researchobject.org/ro-crate/1.2/profiles) (within the specification above)
- [Workflow Crate](https://w3id.org/workflowhub/workflow-ro-crate/) (profile for a workflow _definition_)
- [Workflow Testing Crate](https://lifemonitor.eu/workflow_testing_ro_crate) (profile for defining workflow tests)
- [Adding a ComputationalWorkflow in RO-Crate](https://www.researchobject.org/ro-crate/1.1/workflows.html)
Expand Down Expand Up @@ -158,4 +158,3 @@ Unless required by applicable law or agreed to in writing, software distributed

Profile Crates and JSON-LD examples within this specification are distributed
under [CC0 1.0 Universal (CC0 1.0) Public Domain Dedication](https://creativecommons.org/publicdomain/zero/1.0/).

Original file line number Diff line number Diff line change
@@ -1,15 +1,15 @@
{ "@context": "https://w3id.org/ro/crate/1.1/context",
{ "@context": "https://w3id.org/ro/crate/1.2/context",
"@graph": [
{
"@id": "ro-crate-metadata.json",
"@type": "CreativeWork",
"conformsTo": {"@id": "https://w3id.org/ro/crate/1.1"},
"conformsTo": {"@id": "https://w3id.org/ro/crate/1.2"},
"about": {"@id": "./"}
},
{
"@id": "./",
"@type": "Dataset",
"conformsTo": {"@id": "https://w3id.org/ro/wfrun/process/0.4"},
"conformsTo": {"@id": "https://w3id.org/ro/wfrun/process/0.6-DRAFT"},
"hasPart": [
{"@id": "pics/2017-06-11%2012.56.14.jpg"},
{"@id": "pics/sepia_fence.jpg"}
Expand All @@ -21,10 +21,10 @@
"mentions": {"@id": "#SepiaConversion_1"},
"name": "My Pictures"
},
{ "@id": "https://w3id.org/ro/wfrun/process/0.4",
{ "@id": "https://w3id.org/ro/wfrun/process/0.6-DRAFT",
"@type": "CreativeWork",
"name": "Process Run Crate",
"version": "0.5"
"version": "0.6-DRAFT"
},
{
"@id": "https://www.imagemagick.org/",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,13 +6,15 @@

<script type="application/ld+json">
{
"@context": "https://w3id.org/ro/crate/1.1/context",
"@context": [
"https://w3id.org/ro/crate/1.2/context"
],
"@graph": [
{
"@id": "ro-crate-metadata.json",
"@type": "CreativeWork",
"conformsTo": {
"@id": "https://w3id.org/ro/crate/1.1"
"@id": "https://w3id.org/ro/crate/1.2"
},
"about": {
"@id": "./"
Expand All @@ -22,7 +24,7 @@
"@id": "./",
"@type": "Dataset",
"conformsTo": {
"@id": "https://w3id.org/ro/wfrun/process/0.4"
"@id": "https://w3id.org/ro/wfrun/process/0.6-DRAFT"
},
"hasPart": [
{
Expand All @@ -44,10 +46,10 @@
"name": "My Pictures"
},
{
"@id": "https://w3id.org/ro/wfrun/process/0.4",
"@id": "https://w3id.org/ro/wfrun/process/0.6-DRAFT",
"@type": "CreativeWork",
"name": "Process Run Crate",
"version": "0.5"
"version": "0.6-DRAFT"
},
{
"@id": "pics/2017-06-11%2012.56.14.jpg",
Expand Down Expand Up @@ -135,8 +137,8 @@
</nav>
<div class="container">
<div class="jumbotron">
<h4 class="citation"></h3>
<h3 class="item_name">My Pictures</h4>
<h4 class="citation"></h4>
<h3 class="item_name">My Pictures</h3>


<a href="./ro-crate-metadata.json">⬇️🏷️ Download all the metadata for <span class='name'>My Pictures</span> in JSON-LD format</a>
Expand All @@ -151,12 +153,12 @@ <h3 class="item_name">My Pictures</h4>

<div id="summary">
<div class='all-meta'>
<div>
<h3> My Pictures</h3>




<div>
<h3> My Pictures</h3>
<div id="./">

<table class="table metadata table-striped" >
Expand All @@ -171,7 +173,7 @@ <h3> My Pictures</h3>
<td style='text-align:left'><span>Dataset</span></td>
</tr><tr>
<th style="text-align:left;" class="prop">conformsTo<span>&nbsp;</span><a href="http://purl.org/dc/terms/conformsTo">[?]</a></th>
<td style='text-align:left'><a href="#https%3A//w3id.org/ro/wfrun/process/0.4">Process Run Crate</a></td>
<td style='text-align:left'><a href="#https%3A//w3id.org/ro/wfrun/process/0.6-DRAFT">Process Run Crate</a></td>
</tr><tr>
<th style="text-align:left;" class="prop">hasPart<span>&nbsp;</span><a href="http://schema.org/hasPart">[?]</a></th>
<td style='text-align:left'><ul>
Expand All @@ -194,21 +196,20 @@ <h3> My Pictures</h3>
</tr></tbody>
</table>
</div>

</div>
</div>
<hr/><br/><br/>
<div>
<h3><a href="https://w3id.org/ro/wfrun/process/0.4">Go to: </a> Process Run Crate</h3>




<div id="https://w3id.org/ro/wfrun/process/0.4">
<div>
<h3><a href="https://w3id.org/ro/wfrun/process/0.6-DRAFT">Go to: </a> Process Run Crate</h3>
<div id="https://w3id.org/ro/wfrun/process/0.6-DRAFT">

<table class="table metadata table-striped" >
<tbody><tr>
<th style="text-align:left;" class="prop">@id</th>
<td style='text-align:left'><a href="https://w3id.org/ro/wfrun/process/0.4">https://w3id.org/ro/wfrun/process/0.4</a></td>
<td style='text-align:left'><a href="https://w3id.org/ro/wfrun/process/0.6-DRAFT">https://w3id.org/ro/wfrun/process/0.6-DRAFT</a></td>
</tr><tr>
<th style="text-align:left;" class="prop">name<span>&nbsp;</span><a href="http://schema.org/name">[?]</a></th>
<td style='text-align:left'><span>Process Run Crate</span></td>
Expand All @@ -217,22 +218,21 @@ <h3><a href="https://w3id.org/ro/wfrun/process/0.4">Go to: </a> Process Run Crat
<td style='text-align:left'><span>CreativeWork</span></td>
</tr><tr>
<th style="text-align:left;" class="prop">version<span>&nbsp;</span><a href="http://schema.org/version">[?]</a></th>
<td style='text-align:left'><span>0.5</span></td>
<td style='text-align:left'><span>0.6-DRAFT</span></td>
</tr><tr><th colspan="2" style="text-align:center">Items that reference this one</th><tr><tr>
<th style="text-align:left;" class="prop">conformsTo<span>&nbsp;</span><a href="http://purl.org/dc/terms/conformsTo">[?]</a></th>
<td style='text-align:left'><a href="#./">My Pictures</a></td>
</tr></tbody>
</table>
</div>

</div>
</div>
<hr/><br/><br/>
<div>
<h3><a href="pics/2017-06-11%2012.56.14.jpg">⬇️ Download: </a> 2017-06-11 12.56.14.jpg (input)</h3>

<img width='100%' style='object-fit: contain' src='pics/2017-06-11%2012.56.14.jpg'/>


<div>
<h3><a href="pics/2017-06-11%2012.56.14.jpg">⬇️ Download: </a> 2017-06-11 12.56.14.jpg (input)</h3>
<img width='100%' style='object-fit: contain' src='pics/2017-06-11%2012.56.14.jpg'/>
<div id="pics/2017-06-11%2012.56.14.jpg">

<table class="table metadata table-striped" >
Expand Down Expand Up @@ -263,15 +263,14 @@ <h3><a href="pics/2017-06-11%2012.56.14.jpg">⬇️ Download: </a> 2017-06-11 12
</tr></tbody>
</table>
</div>

</div>
</div>
<hr/><br/><br/>
<div>
<h3><a href="pics/sepia_fence.jpg">⬇️ Download: </a> sepia_fence (output)</h3>

<img width='100%' style='object-fit: contain' src='pics/sepia_fence.jpg'/>


<div>
<h3><a href="pics/sepia_fence.jpg">⬇️ Download: </a> sepia_fence (output)</h3>
<img width='100%' style='object-fit: contain' src='pics/sepia_fence.jpg'/>
<div id="pics/sepia_fence.jpg">

<table class="table metadata table-striped" >
Expand Down Expand Up @@ -299,15 +298,14 @@ <h3><a href="pics/sepia_fence.jpg">⬇️ Download: </a> sepia_fence (output)</h
</tr></tbody>
</table>
</div>

</div>
</div>
<hr/><br/><br/><hr/><br/><br/><hr/><br/><br/>
<div>
<h3> Convert dog image to sepia</h3>




<div>
<h3> Convert dog image to sepia</h3>
<div id="#SepiaConversion_1">

<table class="table metadata table-striped" >
Expand Down Expand Up @@ -344,8 +342,7 @@ <h3> Convert dog image to sepia</h3>
</tr></tbody>
</table>
</div>

</div>
</div>
<hr/><br/><br/></div>
</div>

Expand Down
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