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1. scRAFIKI scRAFIKI Public

   A nextflow pipeline for processing sc-RNASeq data, performing QC and integration and preparing the results for further investigation using cellxgene.

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2. downstream-analysis downstream-analysis Public

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3. hugo-unifier hugo-unifier Public

   This python package can unify gene symbols across datasets based on the HUGO database.

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4. scib scib Public

   Forked from theislab/scib

   Benchmarking analysis of data integration tools

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5. cellxgene_VIP cellxgene_VIP Public

   Forked from interactivereport/cellxgene_VIP

   Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also…

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6. cellxgene cellxgene Public

   Forked from chanzuckerberg/cellxgene

   An interactive explorer for single-cell transcriptomics data

   JavaScript