Fix segmentation plots in reports for input files that are non RAS oriented#16

Merged

mathrip merged 4 commits intoMELDProject:mainfrom

ckronlage:fix_nonras_inputs

Apr 24, 2026

Commits on Jan 21, 2026

Reorient images to RAS for report plots
Cornelius Kronlage
committed
Use tempfile temporary plot files instead of tmp.png in workdir (may interfere with other processes)
Cornelius Kronlage
committed
Remove wrong axis flip and fix origin='lower' in plot_segmentations_subject
Cornelius Kronlage
committed
Apply fixes for handling of non-RAS inputs also to other plot_segmentations_subject function (in run_pipeline_predicicton.py)
Cornelius Kronlage
committed