Enhancements for Becker & Hickl SPCM Support#48

Merged

tpeulen merged 26 commits intoFluorescence-Tools:developmentfrom

cqian89:bh-spc130-pr

Mar 8, 2026

Commits on Jan 20, 2026

feat: enable pixel, line and frame marker processing for BH_RECORD_TYPE_SPC130
cqian89
committed
Add BH SPC preprocessing helpers and tests
cqian89
committed
feat: implement pixel marker-based binning support in CLSMImage
cqian89
committed
fix(clsm): handle last pixel in marker binning and optimize memory
cqian89
committed
Add BH CLSM helper functions for Frame 1 adjustment
cqian89
committed
Add integration tests for BH pixel marker-based binning and fix bug in CLSMImage constructor
cqian89
committed
style(clsm): revert whitespace changes from e993834, keep functional additions
cqian89
committed
Add CLSM_BH_SPC130 to ReadingRoutine and fix SP8 comment typo
cqian89
committed
Implement read_bh_set_file() in TTTRHeader to parse BH .set files
cqian89
committed
Auto-find and parse .set files for BH_SPC130_CONTAINER in TTTR::read_file()
cqian89
committed
feat(clsm): apply BH defaults in CLSMImage constructor
cqian89
committed
fix: refine BH SPC-130 default setting logic in CLSMImage
cqian89
committed
Implement BH SPC-130 dimension inference, frame 1 adjustment, and detect_bh_frame1_extra_line
cqian89
committed
Revert BH-specific truncation in remove_incomplete_frames and add underflow guard in create_frames
cqian89
committed
Remove deprecated bh_helpers.py and update BH .set file parsing
cqian89
committed
style: reduce non-functional diffs
cqian89
committed
style: remove trailing whitespace in SPC-130 reader
cqian89
committed
style: align whitespace with upstream
cqian89
committed
fix(clsm): fix BH SPC-130 line marker defaults and unify in Python
cqian89
committed

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Enhancements for Becker & Hickl SPCM Support#48

Enhancements for Becker & Hickl SPCM Support#48
tpeulen merged 26 commits intoFluorescence-Tools:developmentfrom
cqian89:bh-spc130-pr

Commits on Jan 20, 2026

feat: enable pixel, line and frame marker processing for BH_RECORD_TYPE_SPC130

Add BH SPC preprocessing helpers and tests

feat: implement pixel marker-based binning support in CLSMImage

fix(clsm): handle last pixel in marker binning and optimize memory

Add BH CLSM helper functions for Frame 1 adjustment

Add integration tests for BH pixel marker-based binning and fix bug in CLSMImage constructor

style(clsm): revert whitespace changes from e993834, keep functional additions

Add CLSM_BH_SPC130 to ReadingRoutine and fix SP8 comment typo

Implement read_bh_set_file() in TTTRHeader to parse BH .set files

Auto-find and parse .set files for BH_SPC130_CONTAINER in TTTR::read_file()

feat(clsm): apply BH defaults in CLSMImage constructor

fix: refine BH SPC-130 default setting logic in CLSMImage

Implement BH SPC-130 dimension inference, frame 1 adjustment, and detect_bh_frame1_extra_line

Revert BH-specific truncation in remove_incomplete_frames and add underflow guard in create_frames

Remove deprecated bh_helpers.py and update BH .set file parsing

style: reduce non-functional diffs

style: remove trailing whitespace in SPC-130 reader

style: align whitespace with upstream

fix(clsm): fix BH SPC-130 line marker defaults and unify in Python

Commits on Jan 21, 2026

fix(bh): recover truncated recordings by appending synthetic markers

Revert "fix(bh): recover truncated recordings by appending synthetic markers"

fix(clsm): recover truncated BH SPC-130 recordings at CLSMImage level

Fix core logic and API issues in CLSMImage

Improve safety and robustness

Cleanup and documentation

fix(clsm): default n_pixel_per_line to 0 to enable auto-detection