Implementation of different tree ESS estimators:
- The probabilistic approach Expected Difference of Clade Frequencies (EDCF) using a Bayesian (MCMC) and ML estimators.
- Reimplementation of frechetESS by Magee et al.; see R package treess repo for the original version.
- Reimplementation of approximateESS by Lanfear et al.; see R pack RWTY repo for the original version.
These methods were used in experiments in the paper "On estimating the effective sample size of phylogenetic trees in an autocorrelated chain".