v1.1.0

New features

3’ RNA:

• 3’ RNA-seq analysis pipeline has been added to the software.

ATAC/cATAC:

• HTML report has been updated with a reorganized layout, additional tiles for run configuration, and the ability to copy/paste data and figures.

Enhancements to existing features:

ATAC/cATAC:

• The output matrix will now have barcodes as columns and peaks as rows to be consistent with 3’ RNA.
• Cell barcodes are annotated with the XC instead of the DB tag to match the 3’ RNA annotation.
• Version updates to various software packages.