Docs for ease of seeing Demos!

[MMathisLab]

• This PR introduces a Jupyter Book for the demo notebooks.
• It also modifies the notebooks to have better headers, install amadeusgpt and uploading data
• The tests were failing for the changes in the API for SuperAnimal @yeshaokai this will need a careful check from you as well 🙏

[MMathisLab]

[ @yeshaokai I am going to merge this for time reasons, but if you can check the notebooks locally and make another PR for any changes you need, please do! ]

[Copilot]

Pull Request Overview

This PR introduces a Jupyter Book configuration for demo notebooks and updates the demo notebooks to include improved headers, installation commands for amadeusgpt (and related dependencies), and adjustments to the API calls for SuperAnimal. Key changes include:

• Enhancements to notebook presentation and instructions, including API key handling.
• Updates to configuration files (_toc.yml, _config.yml) and a new GitHub Actions workflow for building and publishing the book.
• Improvements and patches in the amadeusgpt codebase related to keypoint file naming and PyTorch weights handling.

Reviewed Changes

Copilot reviewed 12 out of 14 changed files in this pull request and generated 1 comment.

Show a summary per file

File	Description
notebooks/YourData.ipynb	Updated header, installation steps, and API key setup; adds a placeholder code cell.
notebooks/Use_Task_Program.ipynb	Refined notebook text and code for task configuration and API key verification.
notebooks/MausHaus_demo.ipynb	Enhanced documentation and file path comments for demo video uploads.
notebooks/MABe_demo.ipynb	Similar improvements to demo instructions and API key handling.
notebooks/Horse_demo.ipynb	Added notebook header, file upload instructions, and configuration comments.
notebooks/EPM_demo.ipynb	Extended demo setup with file upload and detailed configuration comments.
amadeusgpt/utils/init.py	Introduced utility functions and a patch function for PyTorch weights handling.
amadeusgpt/managers/animal_manager.py	Added new attributes and refined keypoint file naming with additional error checks.
amadeusgpt/analysis_objects/model.py	Integrated the PyTorch patch into the SuperAnimal inference routine.
_toc.yml, _config.yml, .github/workflows/publish-book.yml	New Jupyter Book configuration and publishing workflow files.

Comments suppressed due to low confidence (1)

amadeusgpt/utils/init.py:13

• [nitpick] Consider adding a docstring to the 'filter_kwargs_for_function' function to clarify its purpose and improve code documentation.

def filter_kwargs_for_function(func, kwargs):