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Update tsv, md and png files
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_data/WP109-bibliography.tsv

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ID Database Citation
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9252577 Pubmed "Physiological and morphological effects of genetic alterations leading to a reduced synthesis of UDP-glucose in Saccharomyces cerevisiae. Daran JM, Bell W, François J. FEMS Microbiol Lett. 1997 Aug 1;153(1):89–96. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://qlever.scholia.wiki/pubmed/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
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9252577 Pubmed "Physiological and morphological effects of genetic alterations leading to a reduced synthesis of UDP-glucose in Saccharomyces cerevisiae. Daran JM, Bell W, François J. FEMS Microbiol Lett. 1997 Aug 1;153(1):89–96. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/9252577"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"

_data/WP109-datanodes.tsv

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Label Type Identifier Comment Ensembl NCBI gene HGNC UniProt Wikidata ChEBI InChI PubChem ChemSpider HMDB KEGG LipidMaps
22
H₂O Metabolite chebi:15377 "" wikidata:Q283 chebi:15377 inchikey:XLYOFNOQVPJJNP-UHFFFAOYSA-N pubchem.compound:22247451;pubchem.compound:962 chemspider:937 hmdb:HMDB0002111 kegg.compound:C00001
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UDP-galactose Metabolite chebi:67119 "" wikidata:Q259015 chebi:67119 inchikey:HSCJRCZFDFQWRP-ABVWGUQPSA-N pubchem.compound:18068 chemspider:17069 hmdb:HMDB0000302 kegg.compound:C00052
4-
UDP-D-glucose Metabolite chebi:18066 "" wikidata:Q27102800 chebi:18066 inchikey:HSCJRCZFDFQWRP-RDKQLNKOSA-N pubchem.compound:439156 chemspider:388302 kegg.compound:C00029
4+
UDP-D-glucose Metabolite chebi:18066 "" wikidata:Q27102800 chebi:18066 inchikey:HSCJRCZFDFQWRP-RDKQLNKOSA-N pubchem.compound:439156 chemspider:388302
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UTP Metabolite hmdb:HMDB0000285 "" chebi:15713 inchikey:PGAVKCOVUIYSFO-XVFCMESISA-N pubchem.compound:6133 chemspider:5903 hmdb:HMDB0000285 kegg.compound:C00075
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pyrophosphate Metabolite cas:2466-09-3 "" wikidata:Q411092 chebi:29888 inchikey:XPPKVPWEQAFLFU-UHFFFAOYSA-N pubchem.compound:1023;pubchem.compound:21961011 chemspider:996 hmdb:HMDB0000250 kegg.compound:C00013
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glucose-1-phosphate Metabolite cas:59-56-3 "" wikidata:Q418865 chebi:29042 inchikey:HXXFSFRBOHSIMQ-VFUOTHLCSA-N pubchem.compound:65533 chemspider:58977 hmdb:HMDB0001586 kegg.compound:C00103

_data/WP117-bibliography.tsv

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ID Database Citation
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9399852 Pubmed "GPCRDB: an information system for G protein-coupled receptors. Horn F, Weare J, Beukers MW, Hörsch S, Bairoch A, Chen W, et al. Nucleic Acids Res. 1998 Jan 1;26(1):275–9. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://qlever.scholia.wiki/pubmed/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
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11836223 Pubmed "Classifying G-protein coupled receptors with support vector machines. Karchin R, Karplus K, Haussler D. Bioinformatics. 2002 Jan;18(1):147–59. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://qlever.scholia.wiki/pubmed/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
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9399852 Pubmed "GPCRDB: an information system for G protein-coupled receptors. Horn F, Weare J, Beukers MW, Hörsch S, Bairoch A, Chen W, et al. Nucleic Acids Res. 1998 Jan 1;26(1):275–9. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/9399852"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
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11836223 Pubmed "Classifying G-protein coupled receptors with support vector machines. Karchin R, Karplus K, Haussler D. Bioinformatics. 2002 Jan;18(1):147–59. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/11836223"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"

_data/WP117-datanodes.tsv

Lines changed: 3 additions & 9 deletions
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@@ -8,7 +8,6 @@ GPR GeneProduct ncbigene:11245 "" ensembl:ENSG00000166073 ncbigene:11245 hgnc.sy
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OR7E35P GeneProduct ncbigene:391632 ""
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IL8RA GeneProduct ncbigene:3577 "" ensembl:ENSG00000163464 ncbigene:3577 hgnc.symbol:CXCR1 uniprot:P25024
1010
ALG6 GeneProduct ncbigene:29929 "" ensembl:ENSG00000088035 ncbigene:29929 hgnc.symbol:ALG6 uniprot:A0A3B3ITL6;uniprot:A0A3B3IS62;uniprot:S4R350;uniprot:Q9Y672;uniprot:R4GMS5;uniprot:A0A3B3ITD6;uniprot:A0A3B3ITI5
11-
GRM8 GeneProduct ncbigene:2918 "" ensembl:ENSG00000179603 ncbigene:2918 hgnc.symbol:GRM8 uniprot:E7ETK3;uniprot:C9J7I1;uniprot:H7C4V5;uniprot:O00222
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DRD3 GeneProduct ncbigene:1814 "" ensembl:ENSG00000151577 ncbigene:1814 hgnc.symbol:DRD3 uniprot:X5D2G4;uniprot:P35462;uniprot:E9PCM4;uniprot:A0A8V8TLH3
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P2RY13 GeneProduct ncbigene:53829 "" ensembl:ENSG00000181631 ncbigene:53829 hgnc.symbol:P2RY13 uniprot:Q9BPV8
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OR7E19P GeneProduct ncbigene:26651 ""
@@ -17,7 +16,6 @@ HSA10 GeneProduct uniprot:Q9NZP4 ""
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LPHN3 GeneProduct ncbigene:23284 "" ensembl:ENSG00000150471 ncbigene:23284 hgnc.symbol:ADGRL3 uniprot:Q9HAR2;uniprot:E7ETE3;uniprot:E9PBG4;uniprot:H0Y9K5;uniprot:E7EVD6;uniprot:E7EMR3;uniprot:A0A804HKL8;uniprot:E7ES20;uniprot:E7EUW2;uniprot:E7ESV6;uniprot:E7EW95;uniprot:E7EN28;uniprot:E7ENK1;uniprot:E7EUP0;uniprot:E7EX52
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GPR83 GeneProduct ncbigene:10888 "" ensembl:ENSG00000123901 ncbigene:10888 hgnc.symbol:GPR83 uniprot:Q9NYM4
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OR8G1 GeneProduct ncbigene:26494 "" ensembl:ENSG00000197849 ncbigene:26494 hgnc.symbol:OR8G1 uniprot:Q15617;uniprot:A0A126GVX6
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Q9BYT4 GeneProduct uniprot:Q9BYT4 ""
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GPR145 GeneProduct ncbigene:84539 "" ensembl:ENSG00000152034 ncbigene:84539 hgnc.symbol:MCHR2 uniprot:Q969V1
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GPR77 GeneProduct ncbigene:27202 "" ensembl:ENSG00000134830 ncbigene:27202 hgnc.symbol:C5AR2 uniprot:Q9P296
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OR1F1 GeneProduct ncbigene:4992 "" ensembl:ENSG00000168124 ncbigene:4992 hgnc.symbol:OR1F1 uniprot:O43749
@@ -59,7 +57,6 @@ OR5-85 GeneProduct uniprot:P30953 "" ensembl:ENSG00000180016 ncbigene:8387 hgnc.
5957
GPR84 GeneProduct ncbigene:53831 "" ensembl:ENSG00000139572 ncbigene:53831 hgnc.symbol:GPR84 uniprot:Q9NQS5
6058
CCKBR GeneProduct ncbigene:887 "" ensembl:ENSG00000110148 ncbigene:887 hgnc.symbol:CCKBR uniprot:E9PPL7;uniprot:P32239;uniprot:E9PJ49;uniprot:E9PIC8
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RLN3R1 GeneProduct ncbigene:51289 "" ensembl:ENSG00000182631 ncbigene:51289 hgnc.symbol:RXFP3 uniprot:Q9NSD7
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P47889 GeneProduct uniprot:P47889 ""
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OR7E24 GeneProduct ncbigene:26648 "" ensembl:ENSG00000237521 ncbigene:26648 hgnc.symbol:OR7E24 uniprot:A0A2R8Y4Q1;uniprot:Q6IFN5
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OR1G1 GeneProduct ncbigene:8390 "" ensembl:ENSG00000183024 ncbigene:8390 hgnc.symbol:OR1G1 uniprot:A0A126GW57;uniprot:P47890
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GPR73L1 GeneProduct ncbigene:128674 "" ensembl:ENSG00000101292 ncbigene:128674 hgnc.symbol:PROKR2 uniprot:A0A7I2V3D2;uniprot:Q8NFJ6
@@ -68,9 +65,7 @@ LGR6 GeneProduct ncbigene:59352 "" ensembl:ENSG00000133067 ncbigene:59352 hgnc.s
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GPR17 GeneProduct ncbigene:2840 "" ensembl:ENSG00000144230 ncbigene:2840 hgnc.symbol:GPR17 uniprot:C9JWY5;uniprot:Q13304;uniprot:G4XH68
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GPR55 GeneProduct ncbigene:9290 "" ensembl:ENSG00000135898 ncbigene:9290 hgnc.symbol:GPR55 uniprot:A8K858;uniprot:Q9Y2T6;uniprot:C9J1P7
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HTR7 GeneProduct ncbigene:3363 "" ensembl:ENSG00000148680 ncbigene:3363 hgnc.symbol:HTR7 uniprot:P34969
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Q9H2C7 GeneProduct uniprot:Q9H2C7 ""
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EBI2 GeneProduct ncbigene:1880 "" ensembl:ENSG00000169508 ncbigene:1880 hgnc.symbol:GPR183 uniprot:A0A024RDX2;uniprot:P32249
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OR5D3 GeneProduct uniprot:O95220 ""
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OR3A1 GeneProduct ncbigene:4994 "" ensembl:ENSG00000180090 ncbigene:4994 hgnc.symbol:OR3A1 uniprot:P47881;uniprot:A0A126GVP1
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OR1E3P GeneProduct ncbigene:8389 ""
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GRPR GeneProduct ncbigene:2925 "" ensembl:ENSG00000126010 ncbigene:2925 hgnc.symbol:GRPR uniprot:X5D7H2;uniprot:P30550
@@ -82,9 +77,8 @@ ADRB2 GeneProduct ncbigene:154 "" ensembl:ENSG00000169252 ncbigene:154 hgnc.symb
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GPR62 GeneProduct ncbigene:118442 "" ensembl:ENSG00000180929 ncbigene:118442 hgnc.symbol:GPR62 uniprot:Q9BZJ7
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OR2M4 GeneProduct ncbigene:26245 "" ensembl:ENSG00000171180 ncbigene:26245 hgnc.symbol:OR2M4 uniprot:Q96R27;uniprot:A0A126GV73
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OR1N1 GeneProduct ncbigene:138883 "" ensembl:ENSG00000171505 ncbigene:138883 hgnc.symbol:OR1N1 uniprot:A0A126GW31;uniprot:Q8NGS0
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CCR2 GeneProduct ncbigene:1231 ""
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CCR2 GeneProduct ncbigene:729230 "" ensembl:ENSG00000121807 ncbigene:729230 hgnc.symbol:CCR2 uniprot:E9PH76;uniprot:A0A024R2Q0;uniprot:P41597
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GPR143 GeneProduct ncbigene:4935 "" ensembl:ENSG00000101850 ncbigene:4935 hgnc.symbol:GPR143 uniprot:P51810;uniprot:H7BZN6;uniprot:C9J9N1
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O60411 GeneProduct uniprot:O60411 ""
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LTB4R2 GeneProduct ncbigene:56413 "" ensembl:ENSG00000213906 ncbigene:56413 hgnc.symbol:LTB4R2 uniprot:E9PIC1;uniprot:A0A3Q5ACI7;uniprot:Q9NPC1;uniprot:E9PNJ6
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CHRM3 GeneProduct ncbigene:1131 "" ensembl:ENSG00000133019 ncbigene:1131 hgnc.symbol:CHRM3 uniprot:P20309;uniprot:A0A024R3W1;uniprot:B1AN12;uniprot:A0A6Q8PG67
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GPR133 GeneProduct ncbigene:283383 "" ensembl:ENSG00000111452 ncbigene:283383 hgnc.symbol:ADGRD1 uniprot:Q6QNK2;uniprot:F5H7I3;uniprot:H0Y2U9;uniprot:A0A087WYZ5
@@ -95,15 +89,14 @@ PTGFR GeneProduct ncbigene:5737 "" ensembl:ENSG00000122420 ncbigene:5737 hgnc.sy
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LPHN2 GeneProduct ncbigene:23266 "" ensembl:ENSG00000117114 ncbigene:23266 hgnc.symbol:ADGRL2 uniprot:B1ALU1;uniprot:A0A6I8PUE4;uniprot:B1ALU3;uniprot:A0A6I8PRM6;uniprot:H0Y5C0;uniprot:A0A6I8PRJ0;uniprot:A0A6I8PTT2;uniprot:A0A6I8PU30;uniprot:O95490;uniprot:A0A6I8PLG0;uniprot:A0A8I5KUX3;uniprot:H0Y3V3;uniprot:A0A6I8PRQ0;uniprot:A0A6I8PIV6
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NTSR1 GeneProduct ncbigene:4923 "" ensembl:ENSG00000101188 ncbigene:4923 hgnc.symbol:NTSR1 uniprot:P30989
9791
HSA1 GeneProduct uniprot:Q9NZP5 "" ensembl:ENSG00000196578 ncbigene:81050 hgnc.symbol:OR5AC2 uniprot:Q9NZP5
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Q9UEB1 GeneProduct ensembl:ENSG00000185385 "" ensembl:ENSG00000185385 ncbigene:26333 hgnc.symbol:OR7A17 uniprot:A0A126GVR5;uniprot:O14581
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OR2A5 GeneProduct ncbigene:393046 "" ensembl:ENSG00000221836 ncbigene:393046 hgnc.symbol:OR2A5 uniprot:A0A126GW49;uniprot:Q96R48
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EMR3 GeneProduct ncbigene:84658 "" ensembl:ENSG00000131355 ncbigene:84658 hgnc.symbol:ADGRE3 uniprot:M0QYN7;uniprot:E7EW83;uniprot:Q9BY15;uniprot:M0R1G2
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GPR116 GeneProduct ncbigene:221395 "" ensembl:ENSG00000069122 ncbigene:221395 hgnc.symbol:ADGRF5 uniprot:Q8IZF2
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TAAR5 GeneProduct ncbigene:9038 "" ensembl:ENSG00000135569 ncbigene:9038 hgnc.symbol:TAAR5 uniprot:O14804
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OR3A3 GeneProduct ncbigene:8392 "" ensembl:ENSG00000159961 ncbigene:8392 hgnc.symbol:OR3A3 uniprot:A0A126GWB3
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TAAR2 GeneProduct ncbigene:9287 "" ensembl:ENSG00000146378 ncbigene:9287 hgnc.symbol:TAAR2 uniprot:Q9P1P5
10598
OR5E1P GeneProduct ensembl:ENSG00000170688 "" ensembl:ENSG00000170688 hgnc.symbol:OR5E1P
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OR1J5 GeneProduct ncbigene:81370 ""
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OR1J5 GeneProduct ncbigene:26740 "" ensembl:ENSG00000197233 ncbigene:26740 hgnc.symbol:OR1J2 uniprot:Q8NGS2;uniprot:A0A126GW18
107100
CCR5 GeneProduct ncbigene:1234 "" ensembl:ENSG00000160791 ncbigene:1234 hgnc.symbol:CCR5 uniprot:Q38L21;uniprot:P51681
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VN1R1 GeneProduct ncbigene:57191 "" ensembl:ENSG00000178201 ncbigene:57191 hgnc.symbol:VN1R1 uniprot:Q9GZP7
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ADORA3 GeneProduct ncbigene:140 "" ensembl:ENSG00000282608 ncbigene:140 hgnc.symbol:ADORA3 uniprot:P0DMS8;uniprot:A0A0J9YWR0
@@ -114,3 +107,4 @@ SSTR2 GeneProduct ncbigene:6752 "" ensembl:ENSG00000180616 ncbigene:6752 hgnc.sy
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GPR61 GeneProduct ncbigene:83873 "" ensembl:ENSG00000156097 ncbigene:83873 hgnc.symbol:GPR61 uniprot:Q9BZJ8;uniprot:A0A8I5KY74;uniprot:G4XH66
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LGR7 GeneProduct ncbigene:59350 "" ensembl:ENSG00000171509 ncbigene:59350 hgnc.symbol:RXFP1 uniprot:E9PCA3;uniprot:Q9HBX9;uniprot:A0A087WWV0;uniprot:A0A0A0MT52;uniprot:B4DGP2;uniprot:E9PIF0
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EMR2 GeneProduct ncbigene:30817 "" ensembl:ENSG00000127507 ncbigene:30817 hgnc.symbol:ADGRE2 uniprot:Q9UHX3;uniprot:B4DWB8;uniprot:M0QY55;uniprot:M0R0K5
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OR5D3P Protein uniprot:A0A2R8Y4L6 "" ensembl:ENSG00000186886 ncbigene:8594 hgnc.symbol:OR5D3P uniprot:A0A2R8Y4L6

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