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PhytoOCT

PhytoOCT is a portable and low-cost Optical Coherence Tomography (OCT) system designed (but not limited) for applications in plant science.

This repository contains the code for the OCTproZ plugin designed for PhytoOCT, along with the Arduino board code that generates the scan signal for the galvo scanners and synchronizes the spectrometer with the galvo scanner.

Hardware

Information about the hardware setup can be found here.

Publication

Development of a portable and low-cost OCT system for horticultural research

BibTeX:

@inproceedings{10.1117/12.3001407,
author = {Miroslav Zabic and Mohamad Bsata and Akshay Solleti and Timm Landes and Hans Bethge and Dag Heinemann},
title = {{Development of a portable and low-cost OCT system for horticultural research}},
volume = {12879},
booktitle = {Photonic Technologies in Plant and Agricultural Science},
editor = {Dag Heinemann and Gerrit Polder},
organization = {International Society for Optics and Photonics},
publisher = {SPIE},
pages = {1287904},
keywords = {OCT, optical coherence tomography, low-cost, portable, phytophotonics},
year = {2024},
doi = {10.1117/12.3001407},
URL = {https://doi.org/10.1117/12.3001407}
}

License

PhytoOCT is licensed under GPLv3.