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environment.yml
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name: snakemake-6.1.0
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- adwaita-icon-theme=48.0=unix_0
- aioeasywebdav=2.4.0=py37h89c1867_1001
- aiohttp=3.7.4.post0=py37h5e8e339_1
- amply=0.1.6=pyhd8ed1ab_0
- aom=3.9.1=hac33072_0
- appdirs=1.4.4=pyh9f0ad1d_0
- async-timeout=3.0.1=py_1000
- at-spi2-atk=2.38.0=h0630a04_3
- at-spi2-core=2.40.3=h0630a04_0
- atk-1.0=2.38.0=h04ea711_2
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=24.2.0=pyh71513ae_0
- backports=1.0=pyhd8ed1ab_4
- backports.functools_lru_cache=2.0.0=pyhd8ed1ab_0
- bcrypt=3.2.2=py37h540881e_0
- boto3=1.33.13=pyhd8ed1ab_0
- botocore=1.33.13=pyhd8ed1ab_0
- brotli-python=1.0.9=py37hd23a5d3_7
- bzip2=1.0.8=h4bc722e_7
- c-ares=1.34.5=hb9d3cd8_0
- ca-certificates=2025.1.31=hbcca054_0
- cachetools=5.5.0=pyhd8ed1ab_0
- cairo=1.18.4=h3394656_0
- certifi=2024.8.30=pyhd8ed1ab_0
- cffi=1.15.1=py37h43b0acd_1
- chardet=4.0.0=py37h89c1867_3
- charset-normalizer=3.4.0=pyhd8ed1ab_0
- coin-or-cbc=2.10.12=h00e76a6_2
- coin-or-cgl=0.60.9=h82e2f02_4
- coin-or-clp=1.17.10=h8a7a1e7_1
- coin-or-osi=0.108.11=h96cc833_4
- coin-or-utils=2.11.12=h3a12e53_2
- coincbc=2.10.12=2_metapackage
- colorama=0.4.6=pyhd8ed1ab_0
- configargparse=1.7=pyhd8ed1ab_0
- cryptography=38.0.2=py37h5994e8b_1
- datrie=0.8.2=py37h540881e_4
- dav1d=1.2.1=hd590300_0
- dbus=1.13.6=h5008d03_3
- decorator=4.4.2=py_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- docutils=0.19=py37h89c1867_0
- dropbox=12.0.2=pyhd8ed1ab_0
- epoxy=1.5.10=h166bdaf_1
- exceptiongroup=1.2.2=pyhd8ed1ab_0
- expat=2.7.0=h5888daf_0
- fftw=3.3.10=nompi_hf1063bd_110
- filechunkio=1.8=py_2
- filelock=3.16.1=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=h77eed37_3
- fontconfig=2.15.0=h7e30c49_1
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.13.3=h48d6fc4_0
- fribidi=1.0.10=h36c2ea0_0
- ftputil=5.1.0=pyhd8ed1ab_0
- gdk-pixbuf=2.42.12=hb9ae30d_0
- ghostscript=9.18=1
- giflib=5.2.2=hd590300_0
- gitdb=4.0.11=pyhd8ed1ab_0
- gitpython=3.1.43=pyhd8ed1ab_0
- glib-tools=2.84.1=h4833e2c_0
- google-api-core=2.22.0=pyhd8ed1ab_0
- google-api-python-client=2.151.0=pyhff2d567_0
- google-auth=2.23.0=pyh1a96a4e_0
- google-auth-httplib2=0.2.0=pyhd8ed1ab_0
- google-cloud-core=2.3.3=pyhd8ed1ab_0
- google-cloud-storage=2.11.0=pyh1a96a4e_0
- google-crc32c=1.1.2=py37h5d4fa31_3
- google-resumable-media=2.7.2=pyhd8ed1ab_1
- googleapis-common-protos=1.65.0=pyhd8ed1ab_0
- graphite2=1.3.13=h59595ed_1003
- graphviz=12.2.1=h5ae0cbf_1
- grpc-cpp=1.48.1=h30feacc_0
- grpcio=1.48.1=py37hd557365_0
- gtk3=3.24.43=h0c6a113_5
- gts=0.7.6=h977cf35_4
- harfbuzz=11.0.1=h2c12942_0
- hicolor-icon-theme=0.17=ha770c72_2
- httplib2=0.22.0=pyhd8ed1ab_0
- icu=75.1=he02047a_0
- idna=3.10=pyhd8ed1ab_0
- imagemagick=7.1.1_47=imagemagick_hf2058d9_0
- importlib-metadata=4.11.4=py37h89c1867_0
- importlib_metadata=4.11.4=hd8ed1ab_0
- importlib_resources=6.0.0=pyhd8ed1ab_0
- iniconfig=2.0.0=pyhd8ed1ab_0
- jbig=2.1=h7f98852_2003
- jinja2=3.1.4=pyhd8ed1ab_0
- jmespath=1.0.1=pyhd8ed1ab_0
- jsonschema=4.17.3=pyhd8ed1ab_0
- jupyter_core=4.11.1=py37h89c1867_0
- keyutils=1.6.1=h166bdaf_0
- krb5=1.21.3=h659f571_0
- ld_impl_linux-64=2.43=h712a8e2_4
- lerc=4.0.0=h27087fc_0
- libabseil=20220623.0=cxx17_h05df665_6
- libavif16=1.2.1=hbb36593_2
- libblas=3.9.0=31_h59b9bed_openblas
- libcblas=3.9.0=31_he106b2a_openblas
- libcrc32c=1.1.2=h9c3ff4c_0
- libcups=2.3.3=h4637d8d_4
- libde265=1.0.15=h00ab1b0_0
- libdeflate=1.23=h4ddbbb0_0
- libedit=3.1.20250104=pl5321h7949ede_0
- libexpat=2.7.0=h5888daf_0
- libffi=3.4.6=h2dba641_1
- libgcc=14.2.0=h767d61c_2
- libgcc-ng=14.2.0=h69a702a_2
- libgd=2.3.3=h6f5c62b_11
- libgfortran=14.2.0=h69a702a_2
- libgfortran-ng=14.2.0=h69a702a_2
- libgfortran5=14.2.0=hf1ad2bd_2
- libglib=2.84.1=h2ff4ddf_0
- libgomp=14.2.0=h767d61c_2
- libheif=1.19.7=gpl_hc18d805_100
- libiconv=1.18=h4ce23a2_1
- libjpeg-turbo=3.0.0=hd590300_1
- liblapack=3.9.0=31_h7ac8fdf_openblas
- liblapacke=3.9.0=31_he2f377e_openblas
- liblzma=5.8.1=hb9d3cd8_0
- liblzma-devel=5.8.1=hb9d3cd8_0
- libnsl=2.0.1=hd590300_0
- libopenblas=0.3.29=pthreads_h94d23a6_0
- libpng=1.6.47=h943b412_0
- libprotobuf=3.21.8=h6239696_0
- librsvg=2.58.4=he92a37e_3
- libsodium=1.0.18=h36c2ea0_1
- libsqlite=3.49.1=hee588c1_2
- libstdcxx=14.2.0=h8f9b012_2
- libstdcxx-ng=14.2.0=h4852527_2
- libtiff=4.7.0=hd9ff511_3
- libuuid=2.38.1=h0b41bf4_0
- libwebp=1.5.0=hae8dbeb_0
- libwebp-base=1.5.0=h851e524_0
- libxcb=1.17.0=h8a09558_0
- libxkbcommon=1.8.1=hc4a0caf_0
- libxml2=2.13.7=h4bc477f_1
- libzlib=1.3.1=hb9d3cd8_2
- logmuse=0.2.6=pyh8c360ce_0
- markdown-it-py=2.2.0=pyhd8ed1ab_0
- markupsafe=2.1.1=py37h540881e_1
- mdurl=0.1.2=pyhd8ed1ab_0
- multidict=6.0.2=py37h540881e_1
- nbformat=5.8.0=pyhd8ed1ab_0
- ncurses=6.5=h2d0b736_3
- networkx=2.5.1=pyhd8ed1ab_0
- numpy=1.21.6=py37h976b520_0
- oauth2client=4.1.3=py_0
- openjpeg=2.5.3=h5fbd93e_0
- openssl=3.5.0=h7b32b05_0
- packaging=23.2=pyhd8ed1ab_0
- pandas=1.3.5=py37he8f5f7f_0
- pango=1.56.3=h9ac818e_1
- paramiko=3.5.0=pyhd8ed1ab_0
- pcre2=10.44=hba22ea6_2
- peppy=0.40.7=pyhd8ed1ab_0
- pip=24.0=pyhd8ed1ab_0
- pixman=0.44.2=h29eaf8c_0
- pkg-config=0.29.2=h4bc722e_1009
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
- pluggy=1.0.0=py37h89c1867_3
- ply=3.11=pyhd8ed1ab_2
- prettytable=3.7.0=pyhd8ed1ab_0
- proto-plus=1.25.0=pyhd8ed1ab_0
- protobuf=4.21.8=py37hd23a5d3_0
- psutil=5.9.3=py37h540881e_0
- pthread-stubs=0.4=hb9d3cd8_1002
- pulp=2.6.0=py37h89c1867_1
- pyasn1=0.5.1=pyhd8ed1ab_0
- pyasn1-modules=0.3.0=pyhd8ed1ab_0
- pycparser=2.21=pyhd8ed1ab_0
- pygments=2.17.2=pyhd8ed1ab_0
- pygraphviz=1.6=py37h8f50634_0
- pynacl=1.5.0=py37h540881e_1
- pyopenssl=23.2.0=pyhd8ed1ab_1
- pyparsing=3.1.4=pyhd8ed1ab_0
- pyrsistent=0.18.1=py37h540881e_1
- pysftp=0.2.9=py_1
- pysocks=1.7.1=py37h89c1867_5
- pytest=7.4.4=pyhd8ed1ab_0
- python=3.7.12=hf930737_100_cpython
- python-dateutil=2.9.0=pyhd8ed1ab_0
- python-fastjsonschema=2.20.0=pyhd8ed1ab_0
- python-irodsclient=2.1.0=pyhd8ed1ab_0
- python_abi=3.7=4_cp37m
- pytz=2024.2=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0=py37h540881e_4
- ratelimiter=1.2.0=pyhd8ed1ab_1003
- rav1e=0.6.6=he8a937b_2
- re2=2022.06.01=h27087fc_1
- readline=8.2=h8c095d6_2
- requests=2.32.2=pyhd8ed1ab_0
- rich=13.8.1=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- s3transfer=0.8.2=pyhd8ed1ab_0
- setuptools=59.8.0=py37h89c1867_1
- six=1.16.0=pyh6c4a22f_0
- slacker=0.14.0=py_0
- smart_open=7.0.5=pyhd8ed1ab_1
- smmap=5.0.0=pyhd8ed1ab_0
- snakemake=6.1.0=hdfd78af_1
- snakemake-minimal=6.1.0=pyhdfd78af_1
- sqlite=3.49.1=h9eae976_2
- stone=3.3.2=pyhd8ed1ab_0
- svt-av1=3.0.2=h5888daf_0
- tk=8.6.13=noxft_h4845f30_101
- tomli=2.0.2=pyhd8ed1ab_0
- toposort=1.7=pyhd8ed1ab_0
- traitlets=5.9.0=pyhd8ed1ab_0
- typing-extensions=4.7.1=hd8ed1ab_0
- typing_extensions=4.7.1=pyha770c72_0
- ubiquerg=0.8.0=pyhd8ed1ab_0
- uritemplate=4.1.1=pyhd8ed1ab_0
- urllib3=1.26.19=pyhd8ed1ab_0
- veracitools=0.1.3=py_0
- wayland=1.23.1=h3e06ad9_0
- wcwidth=0.2.10=pyhd8ed1ab_0
- wheel=0.42.0=pyhd8ed1ab_0
- wrapt=1.14.1=py37h540881e_0
- x265=3.5=h924138e_3
- xkeyboard-config=2.43=hb9d3cd8_0
- xorg-libice=1.1.2=hb9d3cd8_0
- xorg-libsm=1.2.6=he73a12e_0
- xorg-libx11=1.8.12=h4f16b4b_0
- xorg-libxau=1.0.12=hb9d3cd8_0
- xorg-libxcomposite=0.4.6=hb9d3cd8_2
- xorg-libxcursor=1.2.3=hb9d3cd8_0
- xorg-libxdamage=1.1.6=hb9d3cd8_0
- xorg-libxdmcp=1.1.5=hb9d3cd8_0
- xorg-libxext=1.3.6=hb9d3cd8_0
- xorg-libxfixes=6.0.1=hb9d3cd8_0
- xorg-libxi=1.8.2=hb9d3cd8_0
- xorg-libxinerama=1.1.5=h5888daf_1
- xorg-libxrandr=1.5.4=hb9d3cd8_0
- xorg-libxrender=0.9.12=hb9d3cd8_0
- xorg-libxt=1.3.1=hb9d3cd8_0
- xorg-libxtst=1.2.5=hb9d3cd8_3
- xz=5.8.1=hbcc6ac9_0
- xz-gpl-tools=5.8.1=hbcc6ac9_0
- xz-tools=5.8.1=hb9d3cd8_0
- yaml=0.2.5=h7f98852_2
- yarl=1.7.2=py37h540881e_2
- zipp=3.15.0=pyhd8ed1ab_0
- zlib=1.3.1=hb9d3cd8_2
- zstd=1.5.7=hb8e6e7a_2