TrackMateR/NAMESPACE at main · quantixed/TrackMateR · GitHub

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# Generated by roxygen2: do not edit by hand

export(calculateAlpha)
export(calculateCVE)
export(calculateFD)
export(calculateJD)
export(calculateMSD)
export(calculateTrackDensity)
export(compareDatasetValues)
export(compareDatasets)
export(compareGTDatasets)
export(convert_trackmate_xml_to_csv)
export(correctTrackMateData)
export(find_td_area)
export(fittingJD)
export(makeComparison)
export(makeSummaryReport)
export(plot_tm_MSD)
export(plot_tm_NMSD)
export(plot_tm_allTracks)
export(plot_tm_alpha)
export(plot_tm_cumdistOverTime)
export(plot_tm_dee)
export(plot_tm_displacementHist)
export(plot_tm_displacementOverTime)
export(plot_tm_durationHist)
export(plot_tm_fd)
export(plot_tm_intensityHist)
export(plot_tm_neighbours)
export(plot_tm_speed)
export(plot_tm_width)
export(readGTFile)
export(readTrackMateXML)
export(reportDataset)
import(dplyr)
import(ggplot2)
import(patchwork)
importFrom(ggforce,geom_sina)
importFrom(graphics,frame)
importFrom(graphics,hist)
importFrom(parallel,detectCores)
importFrom(parallel,mclapply)
importFrom(reshape2,melt)
importFrom(stats,aggregate)
importFrom(stats,approx)
importFrom(stats,coef)
importFrom(stats,dist)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,nls)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(utils,data)
importFrom(utils,install.packages)
importFrom(utils,read.csv)
importFrom(utils,write.csv)
importFrom(xml2,read_xml)
importFrom(xml2,xml_attr)
importFrom(xml2,xml_find_all)
importFrom(xml2,xml_find_first)
importFrom(zoo,rollmean)