Repositories list

• reactome_chatbot

  Public
  This is Reactome's chatbot to its database and search index

  Python

  •

  Apache License 2.0

  •1212 forks•99 stars•2828 issues•2626 pull requests•Updated Apr 30, 2026Apr 30, 2026

• logic-network-generator

  Public
  Python

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•11 pull request•Updated Apr 29, 2026Apr 29, 2026

• reactome-curator-workflows

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 29, 2026Apr 29, 2026

• release-orthoinference

  Public
  Data-release-pipeline: Orthology projection of human reactions and pathways to non-human species

  releasedata-release-pipelinemysql-release

  releasedata-release-pipelinemysql-release

  Java

  •00 forks•00 stars•00 issues•44 pull requests•Updated Apr 29, 2026Apr 29, 2026

• diagram-converter

  Public
  Generates a set of JSON files to be consumed by the Diagram Viewer

  Java

  •33 forks•11 star•00 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• graph-core

  Public
  Models the Reactome knowledgebase into a interconnected graph

  Java

  •99 forks•1919 stars•33 issues•33 pull requests•Updated Apr 28, 2026Apr 28, 2026

• reaction-exporter

  Public
  Java

  •22 forks•00 stars•00 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• reactome-mcp

  Public
  This is just a prototype for now

  TypeScript

  •

  Apache License 2.0

  •1313 forks•55 stars•11 issue•1616 pull requests•Updated Apr 27, 2026Apr 27, 2026

• search-indexer

  Public
  Java

  •33 forks•00 stars•00 issues•22 pull requests•Updated Apr 27, 2026Apr 27, 2026

• curator-tool-frontend

  Public
  TypeScript

  •11 fork•11 star•33 issues•00 pull requests•Updated Apr 26, 2026Apr 26, 2026

• WebsiteAngular

  Public
  REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. This repository contains the main website along with the Pathway B…

  research-toolpathway-tools

  research-toolpathway-tools

  TypeScript

  •

  Apache License 2.0

  •33 forks•00 stars•3030 issues•22 pull requests•Updated Apr 24, 2026Apr 24, 2026

• reactome_neo4j_env

  Public
  Provides docker environment for our Neo4j databases

  Dockerfile

  •

  MIT License

  •44 forks•00 stars•00 issues•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• Website

  Public
  Contains the code and configuration for the website

  PHP

  •

  GNU General Public License v2.0

  •22 forks•55 stars•11 issue•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• CuratorTool

  Public
  The Reactome Java API for the relational database and the Curator Tool

  Java

  •77 forks•33 stars•1111 issues•55 pull requests•Updated Apr 20, 2026Apr 20, 2026

• update-tracker

  Public
  A project to create and commit update tracker instances

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• release-epmc-ncbi-exporter

  Public
  Data-release-pipeline: Data exports for submission to NCBI, UCSC, and Europe PMC

  exporterreleaseneo4j-release+ 1

  exporterreleaseneo4j-releasedata-release-pipeline

  Java

  •00 forks•11 star•22 issues•11 pull request•Updated Apr 13, 2026Apr 13, 2026

• curator-tool-llm

  Public
  The project to leverage LLMs for Reactome curation

  Jupyter Notebook

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 12, 2026Apr 12, 2026

• ReactomeScraping

  Public
  Python

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 9, 2026Apr 9, 2026

• reactome_illustrations

  Public
  This repo is used to store EHLD and icon SGV files exported from Figma

  Python

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•11 pull request•Updated Apr 2, 2026Apr 2, 2026

• illustration-validator

  Public
  Validate the structure and values of icon files

  Java

  •22 forks•00 stars•00 issues•22 pull requests•Updated Apr 2, 2026Apr 2, 2026

• graph-importer

  Public
  Converts the Reactome knowledgebase into a interconnected graph

  Java

  •44 forks•88 stars•00 issues•00 pull requests•Updated Mar 30, 2026Mar 30, 2026

• analysis-service

  Public
  A RESTful API to access pathway analysis tools

  Java

  •44 forks•44 stars•11 issue•33 pull requests•Updated Mar 27, 2026Mar 27, 2026

• release-download-directory

  Public
  Data-release-pipeline: Generation of files for the Reactome website download directory

  releasedata-release-pipelinemysql-release

  releasedata-release-pipelinemysql-release

  Java

  •11 fork•00 stars•1010 issues•00 pull requests•Updated Mar 26, 2026Mar 26, 2026

• PathwayBrowser

  Public archive
  TypeScript

  •00 forks•11 star•2020 issues•00 pull requests•Updated Mar 20, 2026Mar 20, 2026

• fireworks-layout

  Public
  Custom radial layout algorithm to visualise Reactome pathways in a space-filling graph

  visualisationpathwayspathways-overview+ 2

  visualisationpathwayspathways-overviewreactome-pathwayradial-layout

  Java

  •33 forks•11 star•11 issue•00 pull requests•Updated Mar 19, 2026Mar 19, 2026

• release_gocam

  Public
  This pipeline generates go-cam ttl files from biopax and validates them

  Shell

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 18, 2026Mar 18, 2026

• interaction-importer

  Public
  This is for importing Intact data into the neo4j database

  Java

  •00 forks•00 stars•00 issues•11 pull request•Updated Mar 17, 2026Mar 17, 2026

• graph-qa

  Public
  Used to report possible data inconsistencies

  Java

  •11 fork•11 star•00 issues•00 pull requests•Updated Mar 17, 2026Mar 17, 2026

• biomodels-mapper

  Public
  Mapping BioModels to Reactome using analysis results

  Java

  •00 forks•33 stars•00 issues•22 pull requests•Updated Mar 17, 2026Mar 17, 2026

• content-service

  Public
  The new Reactome REST API to access the data

  Java

  •66 forks•1111 stars•22 issues•33 pull requests•Updated Mar 13, 2026Mar 13, 2026