clean up after merging

Author: Raymond Fei

.github/environment.yml

@@ -0,0 +1,10 @@
+name: build
+channels:
+  - conda-forge
+dependencies:
+  - conda
+  - compilers
+  - ninja
+  - cmake
+  - zlib
+

.github/workflows/test.yml

@@ -0,0 +1,76 @@
+
+name: Test
+on: [push, pull_request]
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  build:
+    name: ${{ matrix.os }} with BUILD_SHARED_LIBS=${{matrix.shared}}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [macos-latest, windows-latest, ubuntu-latest]
+        shared: [ON, OFF]
+
+    steps:
+     - uses: actions/checkout@v4
+     - uses: ilammy/msvc-dev-cmd@v1
+       if: matrix.os == 'windows-latest'
+     - name: Support longpaths
+       run: git config --system core.longpaths true
+       if: matrix.os == 'windows-latest'
+     - uses: mamba-org/setup-micromamba@v2
+       with:
+           init-shell: bash
+           environment-file: .github/environment.yml
+           environment-name: "build"
+
+     - name: Setup
+       shell: bash -l {0}
+       run: |
+           mkdir build
+
+     - name: CMake
+       shell: bash -l {0}
+       env:
+        BUILD_SHARED_LIBS: ${{ matrix.shared }}
+
+       run: |
+
+        if [ "$RUNNER_OS" == "Windows" ]; then
+        export CC=cl.exe
+        export CXX=cl.exe
+        fi
+
+        cmake   -G "Ninja"  \
+              -DCMAKE_BUILD_TYPE=RelWithDebInfo \
+              -DBUILD_SHARED_LIBS=$BUILD_SHARED_LIBS \
+              -DBUILD_TESTING=ON \
+              -DCMAKE_INSTALL_PREFIX=${CONDA_PREFIX} \
+              -DCMAKE_WINDOWS_EXPORT_ALL_SYMBOLS=ON \
+              ..
+
+
+       working-directory: ./build
+
+     - name: Compile
+       shell: bash -l {0}
+       run: |
+          ninja
+       working-directory: ./build
+
+     - name: Install
+       shell: bash -l {0}
+       run: |
+          ninja install
+       working-directory: ./build
+
+     - name: "There are no tests :spoon:"
+       shell: bash -l {0}
+       run: |
+          echo "There are no tests"
+       working-directory: ./build
+

.gitignore

@@ -1,64 +1,20 @@
-# Temp stuff
-*~
-\#*
 .DS_Store
-*.log
+*.pyc
 
-# Libs
-__pycache__/
-*.py[cod]
-*$py.class
-*.so
+# CMake
+CMakeCache.txt
+CMakeFiles/
+CMakeScripts/
+Testing/
+*.cmake
 
-# Distribution / packaging
-.Python
+# Build directories
 build/
-develop-eggs/
-dist/
-downloads/
-eggs/
-.eggs/
-lib/
-lib64/
-parts/
-sdist/
-var/
-wheels/
-pip-wheel-metadata/
-share/python-wheels/
-*.egg-info/
-.installed.cfg
-*.egg
-MANIFEST
-/.vscode
-
-# Miniconda
-/.miniconda3
-/.venv
-/.node
-
-# Coverage output
-/.coverage
-/.coverage_html
-
-# test output
-/.tmp_test_out
-
-# dynamic version file
-/version.py
-
-# typescript files
-node_modules
-dist/
-npm-debug.log
-tsconfig.tsbuildinfo
-
-# metabuild
-/build_mb
-
-# builds
-/wheelhouse
-
-# eval
-/eval*
-/output*
+Build/
+BUILD/
+out/
+_build/
+
+# CMake temporary files
+*.tmp
+*.cmake~

pyproject.toml

@@ -8,7 +8,7 @@ dynamic = ["version"]
 description = "Python bindings for SPZ file format library that compiles bindings using nanobind and scikit-build"
 readme = "README.md"
 requires-python = ">=3.8"
-dependencies = ["numpy", "plyfile>=1.1.2"]
+dependencies = ["numpy"]
 # ---------------------------------------------------------------------------
 # Tell scikit-build-core to obtain the dynamic version from CMakeLists:
 # ---------------------------------------------------------------------------