rtRBA/environment.yml at main · maranasgroup/rtRBA · GitHub

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name: rba
channels:
  - anaconda
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - annotated-types=0.6.0=pyhd8ed1ab_0
  - anyio=4.3.0=pyhd8ed1ab_0
  - appdirs=1.4.4=pyh9f0ad1d_0
  - blas=1.1=openblas
  - brotli=1.1.0=hd590300_1
  - brotli-bin=1.1.0=hd590300_1
  - brotli-python=1.1.0=py312h30efb56_1
  - bzip2=1.0.8=hd590300_5
  - ca-certificates=2024.7.4=hbcca054_0
  - certifi=2024.7.4=pyhd8ed1ab_0
  - charset-normalizer=3.3.2=pyhd8ed1ab_0
  - cobra=0.29.0=pyhd8ed1ab_0
  - contourpy=1.2.1=py312h8572e83_0
  - cycler=0.12.1=pyhd8ed1ab_0
  - depinfo=2.2.0=pyhd8ed1ab_0
  - diskcache=5.6.3=pyhd8ed1ab_0
  - et_xmlfile=1.1.0=pyhd8ed1ab_0
  - exceptiongroup=1.2.0=pyhd8ed1ab_2
  - fonttools=4.51.0=py312h98912ed_0
  - freetype=2.12.1=h267a509_2
  - future=1.0.0=pyhd8ed1ab_0
  - gdb=14.2=py312heaf2220_0
  - gf2x=1.3.0=ha476b99_2
  - glpk=5.0=h445213a_0
  - gmp=6.3.0=h59595ed_1
  - h11=0.14.0=pyhd8ed1ab_0
  - h2=4.1.0=pyhd8ed1ab_0
  - hpack=4.0.0=pyh9f0ad1d_0
  - httpcore=1.0.5=pyhd8ed1ab_0
  - httpx=0.27.0=pyhd8ed1ab_0
  - hyperframe=6.0.1=pyhd8ed1ab_0
  - idna=3.7=pyhd8ed1ab_0
  - importlib-metadata=7.1.0=pyha770c72_0
  - importlib_metadata=7.1.0=hd8ed1ab_0
  - importlib_resources=6.4.0=pyhd8ed1ab_0
  - keyutils=1.6.1=h166bdaf_0
  - kiwisolver=1.4.5=py312h8572e83_1
  - krb5=1.21.2=h659d440_0
  - lcms2=2.16=hb7c19ff_0
  - ld_impl_linux-64=2.40=h55db66e_0
  - lerc=4.0.0=h27087fc_0
  - libblas=3.9.0=22_linux64_openblas
  - libbrotlicommon=1.1.0=hd590300_1
  - libbrotlidec=1.1.0=hd590300_1
  - libbrotlienc=1.1.0=hd590300_1
  - libcblas=3.9.0=22_linux64_openblas
  - libdeflate=1.20=hd590300_0
  - libedit=3.1.20191231=he28a2e2_2
  - libexpat=2.6.2=h59595ed_0
  - libffi=3.4.2=h7f98852_5
  - libflint=2.9.0=h2f819a4_ntl_100
  - libgcc-ng=13.2.0=hc881cc4_6
  - libgfortran-ng=13.2.0=h69a702a_6
  - libgfortran5=13.2.0=h43f5ff8_6
  - libgomp=13.2.0=hc881cc4_6
  - libjpeg-turbo=3.0.0=hd590300_1
  - liblapack=3.9.0=22_linux64_openblas
  - libnsl=2.0.1=hd590300_0
  - libopenblas=0.3.27=pthreads_h413a1c8_0
  - libpng=1.6.43=h2797004_0
  - libsodium=1.0.18=h36c2ea0_1
  - libsqlite=3.45.3=h2797004_0
  - libstdcxx-ng=13.2.0=h95c4c6d_6
  - libtiff=4.6.0=h1dd3fc0_3
  - libuuid=2.38.1=h0b41bf4_0
  - libwebp-base=1.4.0=hd590300_0
  - libxcb=1.15=h0b41bf4_0
  - libxcrypt=4.4.36=hd590300_1
  - libzlib=1.2.13=hd590300_5
  - markdown-it-py=3.0.0=pyhd8ed1ab_0
  - matplotlib-base=3.8.4=py312he5832f3_0
  - mdurl=0.1.2=pyhd8ed1ab_0
  - mpc=1.3.1=hfe3b2da_0
  - mpfr=4.2.1=h9458935_1
  - mpmath=1.3.0=pyhd8ed1ab_0
  - munkres=1.1.4=pyh9f0ad1d_0
  - ncurses=6.4.20240210=h59595ed_0
  - ntl=11.4.3=hef3c4d3_1
  - numpy=1.26.4=py312h2809609_0
  - numpy-base=1.26.4=py312he1a6c75_0
  - openblas=0.3.27=pthreads_h7a3da1a_0
  - openjpeg=2.5.2=h488ebb8_0
  - openpyxl=3.1.2=py312h98912ed_1
  - openssl=3.3.1=h4bc722e_2
  - optlang=1.8.1=pyhd8ed1ab_0
  - packaging=24.0=pyhd8ed1ab_0
  - pandas=2.2.2=py312hfb8ada1_0
  - pillow=10.3.0=py312hdcec9eb_0
  - pip=24.0=pyhd8ed1ab_0
  - prompt-toolkit=3.0.43=py312h06a4308_0
  - psutil=5.9.0=py312h5eee18b_0
  - pthread-stubs=0.4=h36c2ea0_1001
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - pure_eval=0.2.2=pyhd8ed1ab_0
  - pydantic=2.7.1=pyhd8ed1ab_0
  - pydantic-core=2.18.2=py312h4413252_0
  - pygments=2.17.2=pyhd8ed1ab_0
  - pyparsing=3.1.2=pyhd8ed1ab_0
  - pysocks=1.7.1=pyha2e5f31_6
  - python=3.12.3=hab00c5b_0_cpython
  - python-dateutil=2.9.0=pyhd8ed1ab_0
  - python-libsbml=5.20.2=py312h30efb56_2
  - python-tzdata=2023.3=pyhd3eb1b0_0
  - python_abi=3.12=4_cp312
  - pytz=2023.3.post1=pyhd8ed1ab_0
  - pyzmq=25.1.2=py312h6a678d5_0
  - readline=8.2=h8228510_1
  - requests=2.32.3=py312h06a4308_0
  - rich=13.7.1=pyhd8ed1ab_0
  - ruamel.yaml=0.18.6=py312h98912ed_0
  - ruamel.yaml.clib=0.2.8=py312h98912ed_0
  - scipy=1.13.0=py312hc2bc53b_1
  - setuptools=69.5.1=pyhd8ed1ab_0
  - six=1.16.0=pyh6c4a22f_0
  - sniffio=1.3.1=pyhd8ed1ab_0
  - swiglpk=5.0.10=py312h98912ed_0
  - symengine=0.11.2=h38c2413_1
  - sympy=1.12=pyh04b8f61_3
  - tk=8.6.13=noxft_h4845f30_101
  - tornado=6.3.3=py312h5eee18b_0
  - traitlets=5.7.1=py312h06a4308_0
  - typing-extensions=4.9.0=py312h06a4308_1
  - typing_extensions=4.9.0=py312h06a4308_1
  - tzdata=2024a=h0c530f3_0
  - urllib3=2.2.2=pyhd8ed1ab_0
  - venn=0.1.3=pyhd8ed1ab_0
  - wcwidth=0.2.5=pyhd3eb1b0_0
  - wheel=0.41.2=py312h06a4308_0
  - xorg-libxau=1.0.11=hd590300_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xz=5.4.6=h5eee18b_1
  - zeromq=4.3.5=h75354e8_3
  - zipp=3.17.0=pyhd8ed1ab_0
  - zlib=1.2.13=hd590300_5
  - zstd=1.5.5=hfc55251_0