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cost-model-sumpy-fused.py
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248 lines (177 loc) · 7.58 KB
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import logging
import os
import numpy as np
import matplotlib.pyplot as plt
import pyopencl as cl
from boxtree import TreeBuilder
from boxtree.array_context import PyOpenCLArrayContext
from sumpy.array_context import PytatoPyOpenCLArrayContext
from boxtree.cost import FMMCostModel, make_pde_aware_translation_cost_model
from boxtree.fmm import drive_fmm
from boxtree.traversal import FMMTraversalBuilder
from boxtree.tools import make_normal_particle_array as p_normal
from functools import partial
from sumpy.expansion.multipole import VolumeTaylorMultipoleExpansion
from sumpy.expansion.local import VolumeTaylorLocalExpansion
from sumpy.kernel import LaplaceKernel
from sumpy.expansion.m2l import NonFFTM2LTranslationClassFactory
from sumpy.fmm import (
SumpyTreeIndependentDataForWrangler,
SumpyExpansionWrangler
)
logging.basicConfig(level=os.environ.get("LOGLEVEL", "WARNING"))
logger = logging.getLogger(__name__)
logger.setLevel(logging.INFO)
def demo_cost_model(plot_results=False, lazy=False):
# {{{ useful variables and actx setup
nsources_list = [5000]
ntargets_list = [5000]
#nsources_list = [100, 200, 300, 400, 500]
#ntargets_list = [100, 200, 300, 400, 500]
nparticles_per_box_list = [32, 64, 128, 256, 512]
#nparticles_per_box_list = [32, 64, 128]
dim = 2
dtype = np.float64
ctx = cl.create_some_context()
queue = cl.CommandQueue(ctx)
actx_boxtree = PyOpenCLArrayContext(queue, force_device_scalars=True)
traversals = []
traversals_dev = []
level_orders_list = []
timing_results = []
results = {}
fields = ["form_multipoles", "eval_direct", "multipole_to_local",
"eval_multipoles", "form_locals", "eval_locals",
"coarsen_multipoles", "refine_locals"]
for field in fields:
results[field] = []
# }}}
def fmm_level_to_order(kernel, kernel_args, tree, ilevel):
return 10
timings = {}
for nparticles_per_box in nparticles_per_box_list:
for nsources, ntargets in zip(nsources_list, ntargets_list):
logger.info(f"Testing nsources = {nsources}, ntargets = {ntargets} "
f"with nparticles per box = {nparticles_per_box}")
# {{{ Generate sources, targets and target_radii
sources = p_normal(actx_boxtree, nsources, dim, dtype, seed=15)
targets = p_normal(actx_boxtree, ntargets, dim, dtype, seed=18)
rng = np.random.default_rng(seed=22)
target_radii = rng.uniform(low=0.0, high=0.05, size=ntargets)
# }}}
# {{{ Generate tree and traversal
tb = TreeBuilder(actx_boxtree)
tree, _ = tb(
actx_boxtree, sources, targets=targets, target_radii=target_radii,
stick_out_factor=0.15,
max_particles_in_box=nparticles_per_box, debug=True
)
tg = FMMTraversalBuilder(actx_boxtree, well_sep_is_n_away=2)
trav_dev, _ = tg(actx_boxtree, tree, debug=True)
#trav = actx.to_numpy(trav_dev)
trav = trav_dev
traversals.append(trav)
traversals_dev.append(trav_dev)
# }}}
# {{{ snag queue from eager tree building arraycontext
if lazy:
queue = actx_boxtree.queue
actx = PytatoPyOpenCLArrayContext(queue)
else:
actx = actx_boxtree
# }}}
# {{{ define kernel and expansion classes
kernel = LaplaceKernel(dim)
mpole_expansion_cls = VolumeTaylorMultipoleExpansion
local_expansion_cls = VolumeTaylorLocalExpansion
m2l_factory = NonFFTM2LTranslationClassFactory()
m2l = m2l_factory.get_m2l_translation_class(kernel,
local_expansion_cls)()
# }}}
# {{{ define interface for fmm driver
tree_indep = SumpyTreeIndependentDataForWrangler(
actx,
partial(mpole_expansion_cls, kernel),
partial(local_expansion_cls, kernel, m2l_translation=m2l),
[kernel])
wrangler = SumpyExpansionWrangler(
tree_indep,
trav,
np.float64,
fmm_level_to_order=fmm_level_to_order)
level_orders_list.append(wrangler.level_orders)
# }}}
# {{{ fmm
timing_data = {}
src_weights = np.random.rand(tree.nsources).astype(tree.coord_dtype)
drive_fmm(actx, wrangler, (src_weights,), timing_data=timing_data)
timing_results.append(timing_data)
# def driver(src_weights):
# return drive_fmm(actx, wrangler, (src_weights,),
# timing_data=timing_data)
#
# src_weights = actx.from_numpy(src_weights)
# actx.compile(driver)(src_weights)
# }}}
# {{{ build cost model
time_field_name = "process_elapsed"
cost_model = FMMCostModel(make_pde_aware_translation_cost_model)
model_results = []
for icase in range(len(traversals)-1):
traversal = traversals_dev[icase]
model_results.append(
cost_model.cost_per_stage(
actx_boxtree, traversal, level_orders_list[icase],
FMMCostModel.get_unit_calibration_params(),
)
)
# }}}
queue.finish()
if not timing_results:
return
# {{{ analyze and report cost model results
params = cost_model.estimate_calibration_params(
model_results, timing_results[:-1], time_field_name=time_field_name
)
predicted_time = cost_model.cost_per_stage(
actx_boxtree, traversals_dev[-1], level_orders_list[-1], params,
)
queue.finish()
for field in ["form_multipoles", "eval_direct", "multipole_to_local",
"eval_multipoles", "form_locals", "eval_locals",
"coarsen_multipoles", "refine_locals"]:
# measured = timing_results[-1][field]["process_elapsed"]
# pred_err = (
# (measured - predicted_time[field])
# / measured)
# logger.info("actual/predicted time for %s: %.3g/%.3g -> %g %% error",
# field,
# measured,
# predicted_time[field],
# abs(100*pred_err))
if nparticles_per_box != nparticles_per_box_list[0]:
results[field].append(predicted_time[field])
# }}}
if plot_results:
x = np.arange(len(nparticles_per_box_list) - 1)
width = 0.1
mult = 0
fig, ax = plt.subplots()
for field, timing in results.items():
offset = width*mult
bars = ax.bar(x + offset, timing, width, label=field)
#ax.bar_label(bars, padding=4)
mult += 1
ax.set_xlabel("Particles per box")
ax.set_xticks(x + 3*width, nparticles_per_box_list[1:])
ax.set_ylabel("Process time (s)")
ax.legend(loc="upper left", ncols=3)
#plt.show()
plt.savefig("./balancing.pdf")
if __name__ == "__main__":
import argparse
parser = argparse.ArgumentParser()
parser.add_argument("--lazy", action="store_true")
parser.add_argument("--plot_results", action="store_true")
args = parser.parse_args()
demo_cost_model(lazy=args.lazy, plot_results=args.plot_results)