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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 1- name : Code Linting πβ‘
1+ name : Linting π πβ‘
22
33on :
44 push :
55 pull_request :
66 workflow_dispatch :
77
88jobs :
9-
10- lint :
9+ ruff :
1110 name : Ruff β‘π΅
1211
1312 runs-on : ubuntu-latest
1413
1514 steps :
16-
1715 - name : π₯ Checkout repo
1816 uses : actions/checkout@v4
1917
2018 - name : Run Ruff checks β‘
2119 uses : astral-sh/ruff-action@v3
2220 with :
2321 args : check
22+
23+ markdownlint :
24+ name : Markdownlint ππ΅
25+
26+ runs-on : ubuntu-latest
27+ steps :
28+ - name : π₯ Checkout repo
29+ uses : actions/checkout@v4
30+
31+ - name : Run markdownlint-cli2-action π
32+ uses : DavidAnson/markdownlint-cli2-action@v22
33+ with :
34+ globs : |
35+ *.md
36+ !test/*.md
Original file line number Diff line number Diff line change 1515 " bdvp" ,
1616 " bigstitcher" ,
1717 " biop" ,
18+ " clij" ,
19+ " Dscijava" ,
20+ " flatfield" ,
21+ " Fluo" ,
22+ " IJPB" ,
1823 " imageplus" ,
24+ " imarisconvert" ,
1925 " imglib" ,
26+ " imgplus" ,
2027 " interestpoint" ,
2128 " intermodes" ,
2229 " javax" ,
30+ " keyvalue" ,
2331 " Kheops" ,
32+ " labelimage" ,
33+ " listdir" ,
2434 " micrometa" ,
35+ " Morpholib" ,
2536 " multiresolution" ,
37+ " olefile" ,
38+ " omerotools" ,
39+ " ordereddict" ,
2640 " otsu" ,
2741 " pathtools" ,
42+ " phmax" ,
2843 " Prefs" ,
44+ " processingoptions" ,
2945 " PTBIOP" ,
3046 " PYENV" ,
3147 " pylint" ,
3248 " ransac" ,
3349 " renyi" ,
3450 " repartitions" ,
51+ " resultstable" ,
3552 " RETVAL" ,
53+ " roimanager" ,
54+ " rois" ,
55+ " rollingball" ,
3656 " scijava" ,
3757 " shanbhag" ,
3858 " sjlogging" ,
59+ " smtpserver" ,
3960 " spimdata" ,
61+ " stardist" ,
62+ " stdv" ,
4063 " strtools" ,
4164 " subfolders" ,
4265 " subsampling" ,
66+ " TESTDATA" ,
67+ " thresholding" ,
4368 " trackmate" ,
4469 " virtualenv" ,
4570 " virtualfish"
Original file line number Diff line number Diff line change 1+ <!-- markdownlint-disable MD041 (first-line-heading) -->
2+
13:snake ::coffee ::nut_and_bolt ::wrench :
24A collection of commonly used Python helper functions.
Original file line number Diff line number Diff line change @@ -6,9 +6,9 @@ Those parts of the package that do not interact / depend on ImageJ objects can
66be tested via [ ` pytest ` ] [ pytest ] up to a certain level, some (most?) of them
77should even work in a Python 3 environment.
88
9- To perform those tests, the packges otherwise provided by ImageJ need to be
10- mocked using the ` imcf-fiji-mocks ` package. For seting up a * venv* use the steps
11- described here:
9+ To perform those tests, the packages otherwise provided by ImageJ need to be
10+ mocked using the ` imcf-fiji-mocks ` package. For setting up a * venv* use the
11+ steps described here:
1212
1313``` bash
1414# check if we're "inside" the repo already, otherwise clone it here:
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