From acccc58cf28d344740900d7f73bff5f2f61706b4 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Ma=C3=ABlle=20Salmon?= Date: Thu, 12 Feb 2026 12:38:28 +0100 Subject: [PATCH] docs: workaround for too much autolinking --- man/E.Rd | 2 +- man/V.Rd | 2 +- man/add.edges.Rd | 2 +- man/add.vertices.Rd | 2 +- man/add_edges.Rd | 2 +- man/add_vertices.Rd | 2 +- man/adjacent.triangles.Rd | 2 +- man/adjacent_vertices.Rd | 2 +- man/aging.ba.game.Rd | 2 +- man/aging.barabasi.game.Rd | 2 +- man/aging.prefatt.game.Rd | 2 +- man/align_layout.Rd | 2 +- man/all_simple_paths.Rd | 2 +- man/alpha.centrality.Rd | 2 +- man/alpha_centrality.Rd | 2 +- man/are.connected.Rd | 2 +- man/are_adjacent.Rd | 2 +- man/articulation.points.Rd | 2 +- man/articulation_points.Rd | 2 +- man/as.directed.Rd | 2 +- man/as.igraph.Rd | 2 +- man/as.matrix.igraph.Rd | 2 +- man/as.undirected.Rd | 2 +- man/as_adj.Rd | 2 +- man/as_adj_list.Rd | 2 +- man/as_adjacency_matrix.Rd | 2 +- man/as_biadjacency_matrix.Rd | 2 +- man/as_directed.Rd | 2 +- man/as_edgelist.Rd | 2 +- man/as_graphnel.Rd | 2 +- man/as_incidence_matrix.Rd | 2 +- man/as_long_data_frame.Rd | 2 +- man/assortativity.Rd | 2 +- man/assortativity.degree.Rd | 2 +- man/assortativity.nominal.Rd | 2 +- man/asymmetric.preference.game.Rd | 2 +- man/authority.score.Rd | 2 +- man/autocurve.edges.Rd | 2 +- man/automorphism_group.Rd | 2 +- man/automorphisms.Rd | 2 +- man/average.path.length.Rd | 2 +- man/ba.game.Rd | 2 +- man/barabasi.game.Rd | 2 +- man/betweenness.Rd | 2 +- man/bfs.Rd | 2 +- man/biconnected.components.Rd | 2 +- man/biconnected_components.Rd | 2 +- man/bipartite.mapping.Rd | 2 +- man/bipartite.projection.Rd | 2 +- man/bipartite.projection.size.Rd | 2 +- man/bipartite.random.game.Rd | 2 +- man/bipartite_mapping.Rd | 2 +- man/bipartite_projection.Rd | 2 +- man/bonpow.Rd | 2 +- man/callaway.traits.game.Rd | 2 +- man/canonical.permutation.Rd | 2 +- man/canonical_permutation.Rd | 2 +- man/centr_betw.Rd | 2 +- man/centr_betw_tmax.Rd | 2 +- man/centr_clo.Rd | 2 +- man/centr_clo_tmax.Rd | 2 +- man/centr_degree.Rd | 2 +- man/centr_degree_tmax.Rd | 2 +- man/centr_eigen.Rd | 2 +- man/centr_eigen_tmax.Rd | 2 +- man/centralization.betweenness.Rd | 2 +- man/centralization.betweenness.tmax.Rd | 2 +- man/centralization.closeness.Rd | 2 +- man/centralization.closeness.tmax.Rd | 2 +- man/centralization.degree.Rd | 2 +- man/centralization.degree.tmax.Rd | 2 +- man/centralization.evcent.Rd | 2 +- man/centralization.evcent.tmax.Rd | 2 +- man/centralize.Rd | 2 +- man/centralize.scores.Rd | 2 +- man/cited.type.game.Rd | 2 +- man/citing.cited.type.game.Rd | 2 +- man/clique.number.Rd | 2 +- man/cliques.Rd | 2 +- man/closeness.Rd | 2 +- man/cluster.distribution.Rd | 2 +- man/cluster_edge_betweenness.Rd | 2 +- man/cluster_fast_greedy.Rd | 2 +- man/cluster_fluid_communities.Rd | 2 +- man/cluster_infomap.Rd | 2 +- man/cluster_label_prop.Rd | 2 +- man/cluster_leading_eigen.Rd | 2 +- man/cluster_leiden.Rd | 2 +- man/cluster_louvain.Rd | 2 +- man/cluster_optimal.Rd | 2 +- man/cluster_spinglass.Rd | 2 +- man/cluster_walktrap.Rd | 2 +- man/clusters.Rd | 2 +- man/cocitation.Rd | 2 +- man/cohesive.blocks.Rd | 2 +- man/cohesive_blocks.Rd | 2 +- man/communities.Rd | 2 +- man/compare.Rd | 2 +- man/complementer.Rd | 2 +- man/component_wise.Rd | 2 +- man/components.Rd | 2 +- man/compose.Rd | 2 +- man/connect.neighborhood.Rd | 2 +- man/consensus_tree.Rd | 2 +- man/constraint.Rd | 2 +- man/contract.Rd | 2 +- man/contract.vertices.Rd | 2 +- man/convex.hull.Rd | 2 +- man/convex_hull.Rd | 2 +- man/coreness.Rd | 2 +- man/count.multiple.Rd | 2 +- man/count_automorphisms.Rd | 2 +- man/count_isomorphisms.Rd | 2 +- man/count_motifs.Rd | 2 +- man/count_reachable.Rd | 2 +- man/count_subgraph_isomorphisms.Rd | 2 +- man/count_triangles.Rd | 2 +- man/curve_multiple.Rd | 2 +- man/decompose.Rd | 2 +- man/decompose.graph.Rd | 2 +- man/degree.Rd | 2 +- man/degree.distribution.Rd | 2 +- man/degree.sequence.game.Rd | 2 +- man/delete.edges.Rd | 2 +- man/delete.vertices.Rd | 2 +- man/delete_edges.Rd | 2 +- man/delete_vertices.Rd | 2 +- man/dfs.Rd | 2 +- man/diameter.Rd | 2 +- man/difference.igraph.Rd | 2 +- man/dim_select.Rd | 2 +- man/disjoint_union.Rd | 2 +- man/distances.Rd | 2 +- man/diversity.Rd | 2 +- man/dominator.tree.Rd | 2 +- man/dominator_tree.Rd | 2 +- man/dot-apply_modifiers.Rd | 2 +- man/dyad.census.Rd | 2 +- man/dyad_census.Rd | 2 +- man/eccentricity.Rd | 2 +- man/edge.betweenness.Rd | 2 +- man/edge.betweenness.community.Rd | 2 +- man/edge.connectivity.Rd | 2 +- man/edge.disjoint.paths.Rd | 2 +- man/edge_attr.Rd | 2 +- man/edge_connectivity.Rd | 2 +- man/edge_density.Rd | 2 +- man/ego.Rd | 2 +- man/eigen_centrality.Rd | 2 +- man/embed_adjacency_matrix.Rd | 2 +- man/embed_laplacian_matrix.Rd | 2 +- man/ends.Rd | 2 +- man/erdos.renyi.game.Rd | 2 +- man/establishment.game.Rd | 2 +- man/estimate_betweenness.Rd | 2 +- man/estimate_closeness.Rd | 2 +- man/estimate_edge_betweenness.Rd | 2 +- man/evcent.Rd | 2 +- man/exportPajek.Rd | 2 +- man/farthest.nodes.Rd | 2 +- man/fastgreedy.community.Rd | 2 +- man/feedback_arc_set.Rd | 2 +- man/feedback_vertex_set.Rd | 2 +- man/find_cycle.Rd | 2 +- man/fit_hrg.Rd | 2 +- man/forest.fire.game.Rd | 2 +- man/from_incidence_matrix.Rd | 2 +- man/get.adjacency.Rd | 2 +- man/get.adjedgelist.Rd | 2 +- man/get.adjlist.Rd | 2 +- man/get.all.shortest.paths.Rd | 2 +- man/get.data.frame.Rd | 2 +- man/get.diameter.Rd | 2 +- man/get.edge.attribute.Rd | 2 +- man/get.edge.ids.Rd | 2 +- man/get.edgelist.Rd | 2 +- man/get.incidence.Rd | 2 +- man/get.shortest.paths.Rd | 2 +- man/get.stochastic.Rd | 2 +- man/get.vertex.attribute.Rd | 2 +- man/get_edge_ids.Rd | 2 +- man/girth.Rd | 2 +- man/global_efficiency.Rd | 2 +- man/gorder.Rd | 2 +- man/graph.Rd | 2 +- man/graph.adhesion.Rd | 2 +- man/graph.adjacency.Rd | 2 +- man/graph.adjlist.Rd | 2 +- man/graph.atlas.Rd | 2 +- man/graph.automorphisms.Rd | 2 +- man/graph.bfs.Rd | 2 +- man/graph.bipartite.Rd | 2 +- man/graph.complementer.Rd | 2 +- man/graph.compose.Rd | 2 +- man/graph.coreness.Rd | 2 +- man/graph.data.frame.Rd | 2 +- man/graph.de.bruijn.Rd | 2 +- man/graph.density.Rd | 2 +- man/graph.dfs.Rd | 2 +- man/graph.disjoint.union.Rd | 2 +- man/graph.diversity.Rd | 2 +- man/graph.edgelist.Rd | 2 +- man/graph.empty.Rd | 2 +- man/graph.extended.chordal.ring.Rd | 2 +- man/graph.famous.Rd | 2 +- man/graph.formula.Rd | 2 +- man/graph.full.Rd | 2 +- man/graph.full.bipartite.Rd | 2 +- man/graph.full.citation.Rd | 2 +- man/graph.graphdb.Rd | 2 +- man/graph.incidence.Rd | 2 +- man/graph.isocreate.Rd | 2 +- man/graph.kautz.Rd | 2 +- man/graph.knn.Rd | 2 +- man/graph.laplacian.Rd | 2 +- man/graph.lattice.Rd | 2 +- man/graph.lcf.Rd | 2 +- man/graph.maxflow.Rd | 2 +- man/graph.mincut.Rd | 2 +- man/graph.motifs.Rd | 2 +- man/graph.motifs.est.Rd | 2 +- man/graph.motifs.no.Rd | 2 +- man/graph.neighborhood.Rd | 2 +- man/graph.ring.Rd | 2 +- man/graph.star.Rd | 2 +- man/graph.strength.Rd | 2 +- man/graph.tree.Rd | 2 +- man/graph.union.Rd | 2 +- man/graph_.Rd | 2 +- man/graph_center.Rd | 2 +- man/graph_from_adj_list.Rd | 2 +- man/graph_from_adjacency_matrix.Rd | 2 +- man/graph_from_atlas.Rd | 2 +- man/graph_from_biadjacency_matrix.Rd | 2 +- man/graph_from_data_frame.Rd | 2 +- man/graph_from_edgelist.Rd | 2 +- man/graph_from_graphdb.Rd | 2 +- man/graph_from_graphnel.Rd | 2 +- man/graph_from_incidence_matrix.Rd | 2 +- man/graph_from_isomorphism_class.Rd | 2 +- man/graph_from_lcf.Rd | 2 +- man/graph_from_literal.Rd | 2 +- man/graphlet_basis.Rd | 2 +- man/graphlets.candidate.basis.Rd | 2 +- man/graphlets.project.Rd | 2 +- man/greedy_vertex_coloring.Rd | 2 +- man/grg.game.Rd | 2 +- man/growing.random.game.Rd | 2 +- man/gsize.Rd | 2 +- man/handle_vertex_type_arg.Rd | 2 +- man/harmonic_centrality.Rd | 2 +- man/has.multiple.Rd | 2 +- man/has_eulerian_path.Rd | 2 +- man/head_of.Rd | 2 +- man/hits_scores.Rd | 2 +- man/hrg.Rd | 2 +- man/hrg.consensus.Rd | 2 +- man/hrg.create.Rd | 2 +- man/hrg.dendrogram.Rd | 2 +- man/hrg.fit.Rd | 2 +- man/hrg.game.Rd | 2 +- man/hrg.predict.Rd | 2 +- man/hrg_tree.Rd | 2 +- man/hub.score.Rd | 2 +- man/hub_score.Rd | 2 +- man/igraph.from.graphNEL.Rd | 2 +- man/igraph.sample.Rd | 2 +- man/igraph.to.graphNEL.Rd | 2 +- man/igraph.version.Rd | 2 +- man/igraph_version.Rd | 2 +- man/incident.Rd | 2 +- man/incident_edges.Rd | 2 +- man/independence.number.Rd | 2 +- man/independent.vertex.sets.Rd | 2 +- man/induced.subgraph.Rd | 2 +- man/infomap.community.Rd | 2 +- man/inside-square-error.Rd | 2 +- man/interconnected.islands.game.Rd | 2 +- man/intersection.igraph.Rd | 2 +- man/invalidate_cache.Rd | 2 +- man/is.connected.Rd | 2 +- man/is.dag.Rd | 2 +- man/is.degree.sequence.Rd | 2 +- man/is.directed.Rd | 2 +- man/is.graphical.degree.sequence.Rd | 2 +- man/is.loop.Rd | 2 +- man/is.matching.Rd | 2 +- man/is.maximal.matching.Rd | 2 +- man/is.minimal.separator.Rd | 2 +- man/is.multiple.Rd | 2 +- man/is.mutual.Rd | 2 +- man/is.separator.Rd | 2 +- man/is.simple.Rd | 2 +- man/is_acyclic.Rd | 2 +- man/is_biconnected.Rd | 2 +- man/is_complete.Rd | 2 +- man/is_dag.Rd | 2 +- man/is_degseq.Rd | 2 +- man/is_directed.Rd | 2 +- man/is_forest.Rd | 2 +- man/is_graphical.Rd | 2 +- man/is_min_separator.Rd | 2 +- man/is_separator.Rd | 2 +- man/is_tree.Rd | 2 +- man/isomorphic.Rd | 2 +- man/isomorphism_class.Rd | 2 +- man/isomorphisms.Rd | 2 +- man/ivs.Rd | 2 +- man/k.regular.game.Rd | 2 +- man/k_shortest_paths.Rd | 2 +- man/knn.Rd | 2 +- man/label.propagation.community.Rd | 2 +- man/laplacian_matrix.Rd | 2 +- man/largest.cliques.Rd | 2 +- man/largest.independent.vertex.sets.Rd | 2 +- man/lastcit.game.Rd | 2 +- man/layout.auto.Rd | 2 +- man/layout.bipartite.Rd | 2 +- man/layout.davidson.harel.Rd | 2 +- man/layout.drl.Rd | 2 +- man/layout.fruchterman.reingold.grid.Rd | 2 +- man/layout.gem.Rd | 2 +- man/layout.grid.Rd | 2 +- man/layout.mds.Rd | 2 +- man/layout.spring.Rd | 2 +- man/layout.star.Rd | 2 +- man/layout.sugiyama.Rd | 2 +- man/layout.svd.Rd | 2 +- man/layout_as_bipartite.Rd | 2 +- man/layout_as_star.Rd | 2 +- man/layout_as_tree.Rd | 2 +- man/layout_in_circle.Rd | 2 +- man/layout_nicely.Rd | 2 +- man/layout_on_grid.Rd | 2 +- man/layout_on_sphere.Rd | 2 +- man/layout_randomly.Rd | 2 +- man/layout_with_dh.Rd | 2 +- man/layout_with_drl.Rd | 2 +- man/layout_with_fr.Rd | 2 +- man/layout_with_gem.Rd | 2 +- man/layout_with_kk.Rd | 2 +- man/layout_with_lgl.Rd | 2 +- man/layout_with_mds.Rd | 2 +- man/layout_with_sugiyama.Rd | 2 +- man/leading.eigenvector.community.Rd | 2 +- man/line.graph.Rd | 2 +- man/local_scan.Rd | 2 +- man/make_.Rd | 2 +- man/make_bipartite_graph.Rd | 2 +- man/make_chordal_ring.Rd | 2 +- man/make_circulant.Rd | 2 +- man/make_de_bruijn_graph.Rd | 2 +- man/make_empty_graph.Rd | 2 +- man/make_from_prufer.Rd | 2 +- man/make_full_bipartite_graph.Rd | 2 +- man/make_full_citation_graph.Rd | 2 +- man/make_full_graph.Rd | 2 +- man/make_full_multipartite.Rd | 2 +- man/make_graph.Rd | 2 +- man/make_kautz_graph.Rd | 2 +- man/make_lattice.Rd | 2 +- man/make_line_graph.Rd | 2 +- man/make_ring.Rd | 2 +- man/make_star.Rd | 2 +- man/make_tree.Rd | 2 +- man/make_turan.Rd | 2 +- man/make_wheel.Rd | 2 +- man/matching.Rd | 2 +- man/max_cardinality.Rd | 2 +- man/max_flow.Rd | 2 +- man/maximal.cliques.Rd | 2 +- man/maximal.cliques.count.Rd | 2 +- man/maximal.independent.vertex.sets.Rd | 2 +- man/maximal_ivs.Rd | 2 +- man/maximum.bipartite.matching.Rd | 2 +- man/maximum.cardinality.search.Rd | 2 +- man/merge_coords.Rd | 2 +- man/min_cut.Rd | 2 +- man/min_separators.Rd | 2 +- man/min_st_separators.Rd | 2 +- man/minimal.st.separators.Rd | 2 +- man/minimum.size.separators.Rd | 2 +- man/minimum.spanning.tree.Rd | 2 +- man/mod.matrix.Rd | 2 +- man/modularity.igraph.Rd | 2 +- man/motifs.Rd | 2 +- man/mst.Rd | 2 +- man/multilevel.community.Rd | 2 +- man/neighborhood.size.Rd | 2 +- man/neighbors.Rd | 2 +- man/optimal.community.Rd | 2 +- man/page.rank.Rd | 2 +- man/page_rank.Rd | 2 +- man/path.length.hist.Rd | 2 +- man/permute.Rd | 2 +- man/permute.vertices.Rd | 2 +- man/piecewise.layout.Rd | 2 +- man/plot.igraph.Rd | 2 +- man/plotHierarchy.Rd | 2 +- man/power_centrality.Rd | 2 +- man/predict_edges.Rd | 2 +- man/preference.game.Rd | 2 +- man/print.igraph.Rd | 2 +- man/print.igraph.es.Rd | 2 +- man/print.igraph.vs.Rd | 2 +- man/radius.Rd | 2 +- man/random_walk.Rd | 2 +- man/read.graph.Rd | 2 +- man/read_graph.Rd | 2 +- man/realize_bipartite_degseq.Rd | 2 +- man/realize_degseq.Rd | 2 +- man/reciprocity.Rd | 2 +- man/rep.igraph.Rd | 2 +- man/reverse_edges.Rd | 2 +- man/rglplot.Rd | 2 +- man/running.mean.Rd | 2 +- man/running_mean.Rd | 2 +- man/sample_.Rd | 2 +- man/sample_bipartite.Rd | 2 +- man/sample_bipartite_gnm.Rd | 2 +- man/sample_chung_lu.Rd | 2 +- man/sample_correlated_gnp.Rd | 2 +- man/sample_correlated_gnp_pair.Rd | 2 +- man/sample_degseq.Rd | 2 +- man/sample_dirichlet.Rd | 2 +- man/sample_dot_product.Rd | 2 +- man/sample_fitness.Rd | 2 +- man/sample_fitness_pl.Rd | 2 +- man/sample_forestfire.Rd | 2 +- man/sample_gnm.Rd | 2 +- man/sample_gnp.Rd | 2 +- man/sample_grg.Rd | 2 +- man/sample_growing.Rd | 2 +- man/sample_hierarchical_sbm.Rd | 2 +- man/sample_hrg.Rd | 2 +- man/sample_islands.Rd | 2 +- man/sample_k_regular.Rd | 2 +- man/sample_last_cit.Rd | 2 +- man/sample_motifs.Rd | 2 +- man/sample_pa.Rd | 2 +- man/sample_pa_age.Rd | 2 +- man/sample_pref.Rd | 2 +- man/sample_sbm.Rd | 2 +- man/sample_seq.Rd | 2 +- man/sample_smallworld.Rd | 2 +- man/sample_spanning_tree.Rd | 2 +- man/sample_sphere_surface.Rd | 2 +- man/sample_sphere_volume.Rd | 2 +- man/sample_traits_callaway.Rd | 2 +- man/sample_tree.Rd | 2 +- man/sbm.game.Rd | 2 +- man/scan_stat.Rd | 2 +- man/set.edge.attribute.Rd | 2 +- man/set.vertex.attribute.Rd | 2 +- man/set_edge_attr.Rd | 2 +- man/set_vertex_attr.Rd | 2 +- man/set_vertex_attrs.Rd | 2 +- man/shortest.paths.Rd | 2 +- man/similarity.Rd | 2 +- man/similarity.dice.Rd | 2 +- man/similarity.invlogweighted.Rd | 2 +- man/similarity.jaccard.Rd | 2 +- man/simple_cycles.Rd | 2 +- man/simplify.Rd | 2 +- man/sir.Rd | 2 +- man/spinglass.community.Rd | 2 +- man/split_join_distance.Rd | 2 +- man/stCuts.Rd | 2 +- man/stMincuts.Rd | 2 +- man/st_cuts.Rd | 2 +- man/st_min_cuts.Rd | 2 +- man/static.fitness.game.Rd | 2 +- man/static.power.law.game.Rd | 2 +- man/stochastic_matrix.Rd | 2 +- man/strength.Rd | 2 +- man/subcomponent.Rd | 2 +- man/subgraph.Rd | 2 +- man/subgraph.centrality.Rd | 2 +- man/subgraph.edges.Rd | 2 +- man/subgraph_centrality.Rd | 2 +- man/subgraph_isomorphic.Rd | 2 +- man/subgraph_isomorphisms.Rd | 2 +- man/tail_of.Rd | 2 +- man/tkplot.Rd | 2 +- man/tkplot.center.Rd | 2 +- man/tkplot.fit.to.screen.Rd | 2 +- man/tkplot.reshape.Rd | 2 +- man/tkplot.rotate.Rd | 2 +- man/tkplot.setcoords.Rd | 2 +- man/to_prufer.Rd | 2 +- man/topo_sort.Rd | 2 +- man/topological.sort.Rd | 2 +- man/transitive_closure.Rd | 2 +- man/transitivity.Rd | 2 +- man/triad.census.Rd | 2 +- man/triad_census.Rd | 2 +- man/unfold.tree.Rd | 2 +- man/unfold_tree.Rd | 2 +- man/union.igraph.Rd | 2 +- man/upgrade_graph.Rd | 2 +- man/vertex.connectivity.Rd | 2 +- man/vertex.disjoint.paths.Rd | 2 +- man/vertex_attr.Rd | 2 +- man/vertex_connectivity.Rd | 2 +- man/voronoi_cells.Rd | 2 +- man/walktrap.community.Rd | 2 +- man/watts.strogatz.game.Rd | 2 +- man/weighted_cliques.Rd | 2 +- man/which_multiple.Rd | 2 +- man/which_mutual.Rd | 2 +- man/write.graph.Rd | 2 +- man/write_graph.Rd | 2 +- 512 files changed, 512 insertions(+), 512 deletions(-) diff --git a/man/E.Rd b/man/E.Rd index 8ce0179d2bc..40ad78906d5 100644 --- a/man/E.Rd +++ b/man/E.Rd @@ -59,7 +59,7 @@ edges in the sequence. See \code{\link[=$.igraph.es]{$.igraph.es()}} for details } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/V.Rd b/man/V.Rd index 3e54ed4db80..d3c43078786 100644 --- a/man/V.Rd +++ b/man/V.Rd @@ -52,7 +52,7 @@ vertices in the sequence. See \code{\link[=$.igraph.vs]{$.igraph.vs()}} for deta } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/add.edges.Rd b/man/add.edges.Rd index 0c2fc925a37..709091ac5ee 100644 --- a/man/add.edges.Rd +++ b/man/add.edges.Rd @@ -27,7 +27,7 @@ below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/add.vertices.Rd b/man/add.vertices.Rd index 67cf024dce0..f536d296cfd 100644 --- a/man/add.vertices.Rd +++ b/man/add.vertices.Rd @@ -26,7 +26,7 @@ below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/add_edges.Rd b/man/add_edges.Rd index b7696830228..b669f5f3c19 100644 --- a/man/add_edges.Rd +++ b/man/add_edges.Rd @@ -34,7 +34,7 @@ If attributes are supplied, and they are not present in the graph, their values for the original edges of the graph are set to \code{NA}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/add_vertices.Rd b/man/add_vertices.Rd index 542203ac40d..507d4aa5e2f 100644 --- a/man/add_vertices.Rd +++ b/man/add_vertices.Rd @@ -28,7 +28,7 @@ their values for the original vertices of the graph are set to \code{NA}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/adjacent.triangles.Rd b/man/adjacent.triangles.Rd index 759c85ff7d5..534e2cb4acd 100644 --- a/man/adjacent.triangles.Rd +++ b/man/adjacent.triangles.Rd @@ -21,7 +21,7 @@ named graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_count_adjacent_triangles}{\code{count_adjacent_triangles()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_count_adjacent_triangles}{\code{count_adjacent_triangles}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/adjacent_vertices.Rd b/man/adjacent_vertices.Rd index 7cd87e429d2..dd52901f8ed 100644 --- a/man/adjacent_vertices.Rd +++ b/man/adjacent_vertices.Rd @@ -23,7 +23,7 @@ This function is similar to \code{\link[=neighbors]{neighbors()}}, but it querie the adjacent vertices for multiple vertices at once. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/aging.ba.game.Rd b/man/aging.ba.game.Rd index dc615662e41..0b36ccac7db 100644 --- a/man/aging.ba.game.Rd +++ b/man/aging.ba.game.Rd @@ -72,7 +72,7 @@ attachment. See also details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game}} } \keyword{internal} diff --git a/man/aging.barabasi.game.Rd b/man/aging.barabasi.game.Rd index c5dc471b881..4135391a19d 100644 --- a/man/aging.barabasi.game.Rd +++ b/man/aging.barabasi.game.Rd @@ -72,7 +72,7 @@ attachment. See also details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game}} } \keyword{internal} diff --git a/man/aging.prefatt.game.Rd b/man/aging.prefatt.game.Rd index 77e357d4b9d..94e54a48123 100644 --- a/man/aging.prefatt.game.Rd +++ b/man/aging.prefatt.game.Rd @@ -72,7 +72,7 @@ attachment. See also details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_aging_game}{\code{barabasi_aging_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_recent_degree_aging_game}{\code{recent_degree_aging_game}} } \keyword{internal} diff --git a/man/align_layout.Rd b/man/align_layout.Rd index bfb62b60c53..15e21eafd14 100644 --- a/man/align_layout.Rd +++ b/man/align_layout.Rd @@ -24,7 +24,7 @@ rotates the layout to achieve a visually pleasing alignment with the coordinate axes. Doing this is particularly useful with force-directed layouts such as \code{\link[=layout_with_fr]{layout_with_fr()}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align}} } \examples{ diff --git a/man/all_simple_paths.Rd b/man/all_simple_paths.Rd index fb3c90f7364..cb2cce90b76 100644 --- a/man/all_simple_paths.Rd +++ b/man/all_simple_paths.Rd @@ -46,7 +46,7 @@ function, if your graph is lattice-like. This function ignores multiple and loop edges. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_simple_paths}{\code{get_all_simple_paths()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_simple_paths}{\code{get_all_simple_paths}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/alpha.centrality.Rd b/man/alpha.centrality.Rd index 06576dd5f4b..3fac14068e4 100644 --- a/man/alpha.centrality.Rd +++ b/man/alpha.centrality.Rd @@ -55,7 +55,7 @@ support} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/alpha_centrality.Rd b/man/alpha_centrality.Rd index 34bf22bb03a..7d262a9a739 100644 --- a/man/alpha_centrality.Rd +++ b/man/alpha_centrality.Rd @@ -74,7 +74,7 @@ algorithm, the routine may fail is certain cases. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/are.connected.Rd b/man/are.connected.Rd index 6bc190f881c..bfa407556b6 100644 --- a/man/are.connected.Rd +++ b/man/are.connected.Rd @@ -20,7 +20,7 @@ are.connected(graph, v1, v2) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_are_adjacent}{\code{are_adjacent()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_are_adjacent}{\code{are_adjacent}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/are_adjacent.Rd b/man/are_adjacent.Rd index de81ef151ac..022922a88e2 100644 --- a/man/are_adjacent.Rd +++ b/man/are_adjacent.Rd @@ -21,7 +21,7 @@ The order of the vertices only matters in directed graphs, where the existence of a directed \verb{(v1, v2)} edge is queried. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_are_adjacent}{\code{are_adjacent()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_are_adjacent}{\code{are_adjacent}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/articulation.points.Rd b/man/articulation.points.Rd index 05dad4a7ad2..cb0d9515359 100644 --- a/man/articulation.points.Rd +++ b/man/articulation.points.Rd @@ -17,7 +17,7 @@ it is directed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_articulation_points}{\code{articulation_points()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_articulation_points}{\code{articulation_points}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/articulation_points.Rd b/man/articulation_points.Rd index 7ec9051140b..0f6ccd0ecea 100644 --- a/man/articulation_points.Rd +++ b/man/articulation_points.Rd @@ -31,7 +31,7 @@ contains no articulation points, then its vertex connectivity is at least two. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_articulation_points}{\code{articulation_points()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_bridges}{\code{bridges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_articulation_points}{\code{articulation_points}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_bridges}{\code{bridges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \examples{ diff --git a/man/as.directed.Rd b/man/as.directed.Rd index f2d4dac32d0..837849a5dc2 100644 --- a/man/as.directed.Rd +++ b/man/as.directed.Rd @@ -21,7 +21,7 @@ as.directed(graph, mode = c("mutual", "arbitrary", "random", "acyclic")) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_directed}{\code{to_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_directed}{\code{to_directed}} } \keyword{internal} diff --git a/man/as.igraph.Rd b/man/as.igraph.Rd index 794b14f1031..94742d6cd16 100644 --- a/man/as.igraph.Rd +++ b/man/as.igraph.Rd @@ -25,7 +25,7 @@ These objects are created by the \code{\link[=fit_hrg]{fit_hrg()}} and \code{\link[=consensus_tree]{consensus_tree()}} functions. } } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}} } \examples{ diff --git a/man/as.matrix.igraph.Rd b/man/as.matrix.igraph.Rd index 08d14ef8a93..7b4fc750d60 100644 --- a/man/as.matrix.igraph.Rd +++ b/man/as.matrix.igraph.Rd @@ -36,7 +36,7 @@ Other arguments passed through \code{...} are passed to either depending on the value of \code{matrix.type}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/as.undirected.Rd b/man/as.undirected.Rd index 1a0ae66f3f4..7008e0efdce 100644 --- a/man/as.undirected.Rd +++ b/man/as.undirected.Rd @@ -31,7 +31,7 @@ this.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_undirected}{\code{to_undirected()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_undirected}{\code{to_undirected}} } \keyword{internal} diff --git a/man/as_adj.Rd b/man/as_adj.Rd index 61f797bb585..7d4cdde1186 100644 --- a/man/as_adj.Rd +++ b/man/as_adj.Rd @@ -52,7 +52,7 @@ We plan to remove \code{as_adj()} in favor of the more explicitly named \code{as_adjacency_matrix()} so please use \code{as_adjacency_matrix()} instead. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/as_adj_list.Rd b/man/as_adj_list.Rd index e7c389dbddf..0fcf995a17b 100644 --- a/man/as_adj_list.Rd +++ b/man/as_adj_list.Rd @@ -56,7 +56,7 @@ vectors of the adjacency lists are coerced to \code{igraph.vs}, this can be a very expensive operation on large graphs. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/as_adjacency_matrix.Rd b/man/as_adjacency_matrix.Rd index 30ba206fbae..837da113edc 100644 --- a/man/as_adjacency_matrix.Rd +++ b/man/as_adjacency_matrix.Rd @@ -61,7 +61,7 @@ defined in the \sQuote{\code{Matrix}} package, if \code{sparse} if \code{TRUE}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/as_biadjacency_matrix.Rd b/man/as_biadjacency_matrix.Rd index 2854bd924d2..1c0b6c81859 100644 --- a/man/as_biadjacency_matrix.Rd +++ b/man/as_biadjacency_matrix.Rd @@ -53,7 +53,7 @@ Some authors refer to the bipartite adjacency matrix as the this naming to avoid confusion with the edge-vertex incidence matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/as_directed.Rd b/man/as_directed.Rd index 2efa06f57ad..9129c0cf8db 100644 --- a/man/as_directed.Rd +++ b/man/as_directed.Rd @@ -85,7 +85,7 @@ than one mutual edge pairs between the same pair of vertices. } } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_directed}{\code{to_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_undirected}{\code{to_undirected()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_directed}{\code{to_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_to_undirected}{\code{to_undirected}} } \examples{ diff --git a/man/as_edgelist.Rd b/man/as_edgelist.Rd index 1bc4ecf7e25..79352e37108 100644 --- a/man/as_edgelist.Rd +++ b/man/as_edgelist.Rd @@ -24,7 +24,7 @@ graph, like an edge list. \code{as_edgelist()} returns the list of edges in a graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/as_graphnel.Rd b/man/as_graphnel.Rd index fa87ed06fbd..b776ee4993e 100644 --- a/man/as_graphnel.Rd +++ b/man/as_graphnel.Rd @@ -25,7 +25,7 @@ vertex names in the graphNEL graph. Otherwise numeric igraph vertex ids will be used for this purpose. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/as_incidence_matrix.Rd b/man/as_incidence_matrix.Rd index 90f90e19848..bddc5c2a024 100644 --- a/man/as_incidence_matrix.Rd +++ b/man/as_incidence_matrix.Rd @@ -18,7 +18,7 @@ Some authors refer to the bipartite adjacency matrix as the this naming to avoid confusion with the edge-vertex incidence matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/as_long_data_frame.Rd b/man/as_long_data_frame.Rd index d036591d7f1..260971b9343 100644 --- a/man/as_long_data_frame.Rd +++ b/man/as_long_data_frame.Rd @@ -23,7 +23,7 @@ they contain the numeric ids of the incident vertices. The rows are listed in the order of numeric vertex ids. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/assortativity.Rd b/man/assortativity.Rd index 29dfc31907b..b3de5562493 100644 --- a/man/assortativity.Rd +++ b/man/assortativity.Rd @@ -109,7 +109,7 @@ Undirected graphs are effectively treated as directed ones with all-reciprocal e Thus, self-loops are taken into account twice in undirected graphs. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity}{\code{assortativity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_nominal}{\code{assortativity_nominal()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_degree}{\code{assortativity_degree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity}{\code{assortativity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_nominal}{\code{assortativity_nominal}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_degree}{\code{assortativity_degree}} } \examples{ diff --git a/man/assortativity.degree.Rd b/man/assortativity.degree.Rd index 74725be0a54..c8406551c0c 100644 --- a/man/assortativity.degree.Rd +++ b/man/assortativity.degree.Rd @@ -24,7 +24,7 @@ graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_degree}{\code{assortativity_degree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_degree}{\code{assortativity_degree}} } \keyword{internal} diff --git a/man/assortativity.nominal.Rd b/man/assortativity.nominal.Rd index a2236ceca3b..f8b836672ee 100644 --- a/man/assortativity.nominal.Rd +++ b/man/assortativity.nominal.Rd @@ -34,7 +34,7 @@ values at the two ends of edges.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_nominal}{\code{assortativity_nominal()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_assortativity_nominal}{\code{assortativity_nominal}} } \keyword{internal} diff --git a/man/asymmetric.preference.game.Rd b/man/asymmetric.preference.game.Rd index 533bc66fb53..bcb752fb48e 100644 --- a/man/asymmetric.preference.game.Rd +++ b/man/asymmetric.preference.game.Rd @@ -33,7 +33,7 @@ an undirected graph, it must be symmetric.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_asymmetric_preference_game}{\code{asymmetric_preference_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_asymmetric_preference_game}{\code{asymmetric_preference_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/authority.score.Rd b/man/authority.score.Rd index 667f52733de..160589e93d0 100644 --- a/man/authority.score.Rd +++ b/man/authority.score.Rd @@ -35,7 +35,7 @@ selected by the surfer.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/autocurve.edges.Rd b/man/autocurve.edges.Rd index 536f641bc4b..b1b1710ac32 100644 --- a/man/autocurve.edges.Rd +++ b/man/autocurve.edges.Rd @@ -19,7 +19,7 @@ curvature between \code{-start} and \code{start}, spaced equally.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/automorphism_group.Rd b/man/automorphism_group.Rd index b160fcd9bb9..9c5b2e0075e 100644 --- a/man/automorphism_group.Rd +++ b/man/automorphism_group.Rd @@ -72,7 +72,7 @@ generating set is not necessarily minimal, and it may depend on the splitting heuristics used by BLISS. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_automorphism_group}{\code{automorphism_group()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_automorphism_group}{\code{automorphism_group}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/automorphisms.Rd b/man/automorphisms.Rd index c04952a9838..ba0288447ee 100644 --- a/man/automorphisms.Rd +++ b/man/automorphisms.Rd @@ -44,7 +44,7 @@ first smallest maximally non-trivially connected non-singleton cell.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/average.path.length.Rd b/man/average.path.length.Rd index f2fb38059ee..23a1264fd48 100644 --- a/man/average.path.length.Rd +++ b/man/average.path.length.Rd @@ -42,7 +42,7 @@ the result when this parameter is set to \code{TRUE}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_path_length_dijkstra}{\code{average_path_length_dijkstra()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_path_length_dijkstra}{\code{average_path_length_dijkstra}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/ba.game.Rd b/man/ba.game.Rd index 7dec0251114..7d05183c75b 100644 --- a/man/ba.game.Rd +++ b/man/ba.game.Rd @@ -72,7 +72,7 @@ contain the out degrees of the new vertices only, not the ones in the consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_game}{\code{barabasi_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_game}{\code{barabasi_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/barabasi.game.Rd b/man/barabasi.game.Rd index 16159224634..52c02802c7b 100644 --- a/man/barabasi.game.Rd +++ b/man/barabasi.game.Rd @@ -72,7 +72,7 @@ contain the out degrees of the new vertices only, not the ones in the consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_game}{\code{barabasi_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_barabasi_game}{\code{barabasi_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/betweenness.Rd b/man/betweenness.Rd index 6839eb7dcee..847336a0d78 100644 --- a/man/betweenness.Rd +++ b/man/betweenness.Rd @@ -97,7 +97,7 @@ Brandes (see References) is used. multiple edges. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_betweenness_cutoff}{\code{betweenness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_betweenness_cutoff}{\code{betweenness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff}} } \examples{ diff --git a/man/bfs.Rd b/man/bfs.Rd index 24ae136772b..25b0e66c4e3 100644 --- a/man/bfs.Rd +++ b/man/bfs.Rd @@ -140,7 +140,7 @@ to continue the search or \code{TRUE} to terminate it. See examples below on how use the callback function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/biconnected.components.Rd b/man/biconnected.components.Rd index 43d62a46e92..0242128ce2a 100644 --- a/man/biconnected.components.Rd +++ b/man/biconnected.components.Rd @@ -17,7 +17,7 @@ it is directed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_biconnected_components}{\code{biconnected_components()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_biconnected_components}{\code{biconnected_components}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/biconnected_components.Rd b/man/biconnected_components.Rd index a7777b5b4f1..cf574d10b07 100644 --- a/man/biconnected_components.Rd +++ b/man/biconnected_components.Rd @@ -46,7 +46,7 @@ that this is not true for vertices: the same vertex can be part of many biconnected components. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_biconnected_components}{\code{biconnected_components()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_biconnected_components}{\code{biconnected_components}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/bipartite.mapping.Rd b/man/bipartite.mapping.Rd index eae9cf6f060..5fd9075951c 100644 --- a/man/bipartite.mapping.Rd +++ b/man/bipartite.mapping.Rd @@ -16,7 +16,7 @@ bipartite.mapping(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_is_bipartite}{\code{is_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_is_bipartite}{\code{is_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/bipartite.projection.Rd b/man/bipartite.projection.Rd index ba437528826..fd2428d831c 100644 --- a/man/bipartite.projection.Rd +++ b/man/bipartite.projection.Rd @@ -49,7 +49,7 @@ default it will be removed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/bipartite.projection.size.Rd b/man/bipartite.projection.size.Rd index 1922a4b10a4..ea93f1a63ca 100644 --- a/man/bipartite.projection.size.Rd +++ b/man/bipartite.projection.size.Rd @@ -21,7 +21,7 @@ graph has no \sQuote{\code{type}} vertex attribute.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_projection_size}{\code{bipartite_projection_size()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_projection_size}{\code{bipartite_projection_size}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/bipartite.random.game.Rd b/man/bipartite.random.game.Rd index eb33c8309cc..8c35a2a8980 100644 --- a/man/bipartite.random.game.Rd +++ b/man/bipartite.random.game.Rd @@ -46,7 +46,7 @@ is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_game_gnm}{\code{bipartite_game_gnm()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_game_gnp}{\code{bipartite_game_gnp()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_game_gnm}{\code{bipartite_game_gnm}}, \href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_game_gnp}{\code{bipartite_game_gnp}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/bipartite_mapping.Rd b/man/bipartite_mapping.Rd index b5b1c32cabe..3bd3c293c25 100644 --- a/man/bipartite_mapping.Rd +++ b/man/bipartite_mapping.Rd @@ -42,7 +42,7 @@ least two components, then the vertices in the separate components can be mapped independently. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_is_bipartite}{\code{is_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_is_bipartite}{\code{is_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/bipartite_projection.Rd b/man/bipartite_projection.Rd index 37e8ccfbe21..1bda20b65a4 100644 --- a/man/bipartite_projection.Rd +++ b/man/bipartite_projection.Rd @@ -69,7 +69,7 @@ the second. \code{bipartite_projection()} keeps vertex attributes. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_projection_size}{\code{bipartite_projection_size()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_bipartite_projection_size}{\code{bipartite_projection_size}} } \examples{ diff --git a/man/bonpow.Rd b/man/bonpow.Rd index 521a629586a..be035e8c472 100644 --- a/man/bonpow.Rd +++ b/man/bonpow.Rd @@ -44,7 +44,7 @@ support} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/callaway.traits.game.Rd b/man/callaway.traits.game.Rd index 1ae0913531e..9b3b564375d 100644 --- a/man/callaway.traits.game.Rd +++ b/man/callaway.traits.game.Rd @@ -35,7 +35,7 @@ types. These should be probabilities, i.e. numbers between zero and one.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_callaway_traits_game}{\code{callaway_traits_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_callaway_traits_game}{\code{callaway_traits_game}} } \keyword{internal} diff --git a/man/canonical.permutation.Rd b/man/canonical.permutation.Rd index d7de6784375..8278d00810e 100644 --- a/man/canonical.permutation.Rd +++ b/man/canonical.permutation.Rd @@ -30,7 +30,7 @@ for possible values.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_canonical_permutation}{\code{canonical_permutation()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_canonical_permutation}{\code{canonical_permutation}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/canonical_permutation.Rd b/man/canonical_permutation.Rd index 7d5424bb5fe..497d6e3c1e8 100644 --- a/man/canonical_permutation.Rd +++ b/man/canonical_permutation.Rd @@ -94,7 +94,7 @@ See the paper in references for details about these. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_canonical_permutation}{\code{canonical_permutation()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_canonical_permutation}{\code{canonical_permutation}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/centr_betw.Rd b/man/centr_betw.Rd index 0be566d7d56..1afca1a5811 100644 --- a/man/centr_betw.Rd +++ b/man/centr_betw.Rd @@ -37,7 +37,7 @@ then the result was divided by this number. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness}{\code{centralization_betweenness()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness}{\code{centralization_betweenness}} } \examples{ diff --git a/man/centr_betw_tmax.Rd b/man/centr_betw_tmax.Rd index 8f2d8055209..cc3a620b28a 100644 --- a/man/centr_betw_tmax.Rd +++ b/man/centr_betw_tmax.Rd @@ -26,7 +26,7 @@ parameters. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness_tmax}{\code{centralization_betweenness_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness_tmax}{\code{centralization_betweenness_tmax}} } \examples{ diff --git a/man/centr_clo.Rd b/man/centr_clo.Rd index 1e198a7f658..2f2451ff4d8 100644 --- a/man/centr_clo.Rd +++ b/man/centr_clo.Rd @@ -37,7 +37,7 @@ then the result was divided by this number. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness}{\code{centralization_closeness()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness}{\code{centralization_closeness}} } \examples{ diff --git a/man/centr_clo_tmax.Rd b/man/centr_clo_tmax.Rd index cb24ce8cb25..3bada82c0e1 100644 --- a/man/centr_clo_tmax.Rd +++ b/man/centr_clo_tmax.Rd @@ -25,7 +25,7 @@ parameters. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness_tmax}{\code{centralization_closeness_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness_tmax}{\code{centralization_closeness_tmax}} } \examples{ diff --git a/man/centr_degree.Rd b/man/centr_degree.Rd index e8d24cc836a..2bad26581d2 100644 --- a/man/centr_degree.Rd +++ b/man/centr_degree.Rd @@ -45,7 +45,7 @@ then the result was divided by this number. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree}{\code{centralization_degree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree}{\code{centralization_degree}} } \examples{ diff --git a/man/centr_degree_tmax.Rd b/man/centr_degree_tmax.Rd index 39ad9b598e8..9854dc94250 100644 --- a/man/centr_degree_tmax.Rd +++ b/man/centr_degree_tmax.Rd @@ -30,7 +30,7 @@ centrality score for graphs with given order and other parameters. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree_tmax}{\code{centralization_degree_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree_tmax}{\code{centralization_degree_tmax}} } \examples{ diff --git a/man/centr_eigen.Rd b/man/centr_eigen.Rd index b0e78600678..aa2190e8c72 100644 --- a/man/centr_eigen.Rd +++ b/man/centr_eigen.Rd @@ -52,7 +52,7 @@ for a graph with the same number of vertices. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality}{\code{centralization_eigenvector_centrality()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality}{\code{centralization_eigenvector_centrality}} } \examples{ diff --git a/man/centr_eigen_tmax.Rd b/man/centr_eigen_tmax.Rd index f38305ad79c..280965d6e34 100644 --- a/man/centr_eigen_tmax.Rd +++ b/man/centr_eigen_tmax.Rd @@ -33,7 +33,7 @@ other parameters. See \code{\link[=centralize]{centralize()}} for a summary of graph centralization. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality_tmax}{\code{centralization_eigenvector_centrality_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality_tmax}{\code{centralization_eigenvector_centrality_tmax}} } \examples{ diff --git a/man/centralization.betweenness.Rd b/man/centralization.betweenness.Rd index 1a0b36856d5..08ca19bc030 100644 --- a/man/centralization.betweenness.Rd +++ b/man/centralization.betweenness.Rd @@ -22,7 +22,7 @@ centrality score by dividing by the theoretical maximum.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness}{\code{centralization_betweenness()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness}{\code{centralization_betweenness}} } \keyword{internal} diff --git a/man/centralization.betweenness.tmax.Rd b/man/centralization.betweenness.tmax.Rd index 23d77bc600b..0437b2a04f4 100644 --- a/man/centralization.betweenness.tmax.Rd +++ b/man/centralization.betweenness.tmax.Rd @@ -24,7 +24,7 @@ given.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness_tmax}{\code{centralization_betweenness_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_betweenness_tmax}{\code{centralization_betweenness_tmax}} } \keyword{internal} diff --git a/man/centralization.closeness.Rd b/man/centralization.closeness.Rd index 2a58c7164cf..99425241823 100644 --- a/man/centralization.closeness.Rd +++ b/man/centralization.closeness.Rd @@ -26,7 +26,7 @@ centrality score by dividing by the theoretical maximum.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness}{\code{centralization_closeness()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness}{\code{centralization_closeness}} } \keyword{internal} diff --git a/man/centralization.closeness.tmax.Rd b/man/centralization.closeness.tmax.Rd index e1560171fcd..296997b8577 100644 --- a/man/centralization.closeness.tmax.Rd +++ b/man/centralization.closeness.tmax.Rd @@ -27,7 +27,7 @@ given.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness_tmax}{\code{centralization_closeness_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_closeness_tmax}{\code{centralization_closeness_tmax}} } \keyword{internal} diff --git a/man/centralization.degree.Rd b/man/centralization.degree.Rd index fcc7c29d4ea..d79ad2782bf 100644 --- a/man/centralization.degree.Rd +++ b/man/centralization.degree.Rd @@ -30,7 +30,7 @@ centrality score by dividing by the theoretical maximum.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree}{\code{centralization_degree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree}{\code{centralization_degree}} } \keyword{internal} diff --git a/man/centralization.degree.tmax.Rd b/man/centralization.degree.tmax.Rd index a8ee59e781f..fb37be4c389 100644 --- a/man/centralization.degree.tmax.Rd +++ b/man/centralization.degree.tmax.Rd @@ -29,7 +29,7 @@ calculating the degree.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree_tmax}{\code{centralization_degree_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_degree_tmax}{\code{centralization_degree_tmax}} } \keyword{internal} diff --git a/man/centralization.evcent.Rd b/man/centralization.evcent.Rd index 1592b68d728..6232a82e478 100644 --- a/man/centralization.evcent.Rd +++ b/man/centralization.evcent.Rd @@ -34,7 +34,7 @@ centrality score by dividing by the theoretical maximum.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality}{\code{centralization_eigenvector_centrality()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality}{\code{centralization_eigenvector_centrality}} } \keyword{internal} diff --git a/man/centralization.evcent.tmax.Rd b/man/centralization.evcent.tmax.Rd index 941bf2f1c47..58f42161fde 100644 --- a/man/centralization.evcent.tmax.Rd +++ b/man/centralization.evcent.tmax.Rd @@ -31,7 +31,7 @@ eigenvector centralization requires normalized eigenvector centrality scores.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality_tmax}{\code{centralization_eigenvector_centrality_tmax()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization_eigenvector_centrality_tmax}{\code{centralization_eigenvector_centrality_tmax}} } \keyword{internal} diff --git a/man/centralize.Rd b/man/centralize.Rd index 52be480fc97..7371107c8ad 100644 --- a/man/centralize.Rd +++ b/man/centralize.Rd @@ -48,7 +48,7 @@ with a single edge (and potentially many isolates). a graph-level score from vertex-level scores. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization}{\code{centralization()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization}{\code{centralization}} } \examples{ diff --git a/man/centralize.scores.Rd b/man/centralize.scores.Rd index c8beb7003bb..5d2e9a16770 100644 --- a/man/centralize.scores.Rd +++ b/man/centralize.scores.Rd @@ -24,7 +24,7 @@ centrality score by dividing by the supplied theoretical maximum.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization}{\code{centralization()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_centralization}{\code{centralization}} } \keyword{internal} diff --git a/man/cited.type.game.Rd b/man/cited.type.game.Rd index 4ab76a878f8..a6200381f79 100644 --- a/man/cited.type.game.Rd +++ b/man/cited.type.game.Rd @@ -37,7 +37,7 @@ graph as a vertex attribute called \sQuote{\code{type}}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_cited_type_game}{\code{cited_type_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_cited_type_game}{\code{cited_type_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/citing.cited.type.game.Rd b/man/citing.cited.type.game.Rd index 91e4aab00cc..0831fcf0c56 100644 --- a/man/citing.cited.type.game.Rd +++ b/man/citing.cited.type.game.Rd @@ -37,7 +37,7 @@ graph as a vertex attribute called \sQuote{\code{type}}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_citing_cited_type_game}{\code{citing_cited_type_game()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_citing_cited_type_game}{\code{citing_cited_type_game}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/clique.number.Rd b/man/clique.number.Rd index 2a3cc5941cb..f174f244655 100644 --- a/man/clique.number.Rd +++ b/man/clique.number.Rd @@ -16,7 +16,7 @@ clique.number(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_number}{\code{clique_number()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_number}{\code{clique_number}} } \keyword{internal} diff --git a/man/cliques.Rd b/man/cliques.Rd index 28ee81ec917..21d60695054 100644 --- a/man/cliques.Rd +++ b/man/cliques.Rd @@ -138,7 +138,7 @@ of clique sizes, between the given minimum and maximum clique size. \code{is_clique()} tests whether all pairs within a vertex set are connected. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_cliques}{\code{cliques()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_cliques}{\code{largest_cliques()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_number}{\code{clique_number()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_weighted_cliques}{\code{largest_weighted_cliques()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_weighted_clique_number}{\code{weighted_clique_number()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_size_hist}{\code{clique_size_hist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_maximal_cliques_hist}{\code{maximal_cliques_hist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_clique}{\code{is_clique()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_cliques}{\code{cliques}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_cliques}{\code{largest_cliques}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_number}{\code{clique_number}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_weighted_cliques}{\code{largest_weighted_cliques}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_weighted_clique_number}{\code{weighted_clique_number}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_clique_size_hist}{\code{clique_size_hist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_maximal_cliques_hist}{\code{maximal_cliques_hist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_clique}{\code{is_clique}} } \examples{ diff --git a/man/closeness.Rd b/man/closeness.Rd index 3e994bbc83a..28e605155f7 100644 --- a/man/closeness.Rd +++ b/man/closeness.Rd @@ -67,7 +67,7 @@ graphs, consider using the harmonic centrality with \code{\link[=harmonic_centrality]{harmonic_centrality()}} } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_closeness_cutoff}{\code{closeness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_closeness_cutoff}{\code{closeness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster.distribution.Rd b/man/cluster.distribution.Rd index ff4aea99839..f64f2450813 100644 --- a/man/cluster.distribution.Rd +++ b/man/cluster.distribution.Rd @@ -25,7 +25,7 @@ by the cluster sizes.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/cluster_edge_betweenness.Rd b/man/cluster_edge_betweenness.Rd index 3581a2eee5b..8c34663fa3f 100644 --- a/man/cluster_edge_betweenness.Rd +++ b/man/cluster_edge_betweenness.Rd @@ -83,7 +83,7 @@ the betweenness of each of these at the time of their removal; and \code{bridges} contains the IDs of edges whose removal caused a split. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_fast_greedy.Rd b/man/cluster_fast_greedy.Rd index 0c0ff840a9b..2d8aad6474f 100644 --- a/man/cluster_fast_greedy.Rd +++ b/man/cluster_fast_greedy.Rd @@ -48,7 +48,7 @@ community structure in very large networks, http://www.arxiv.org/abs/cond-mat/0408187 for the details. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_fluid_communities.Rd b/man/cluster_fluid_communities.Rd index 3b90fdbc461..47fe0c42357 100644 --- a/man/cluster_fluid_communities.Rd +++ b/man/cluster_fluid_communities.Rd @@ -25,7 +25,7 @@ several fluids interacting in a non-homogeneous environment interaction and density. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_fluid_communities}{\code{community_fluid_communities()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_fluid_communities}{\code{community_fluid_communities}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/cluster_infomap.Rd b/man/cluster_infomap.Rd index 37dd8e15e7e..51fcaaff782 100644 --- a/man/cluster_infomap.Rd +++ b/man/cluster_infomap.Rd @@ -47,7 +47,7 @@ be taken into account. Please see the details of this method in the references given below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_infomap}{\code{community_infomap()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_infomap}{\code{community_infomap}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_label_prop.Rd b/man/cluster_label_prop.Rd index 8fde5915d2d..fb8f8fa7d69 100644 --- a/man/cluster_label_prop.Rd +++ b/man/cluster_label_prop.Rd @@ -69,7 +69,7 @@ connected groups of nodes form a consensus on a unique label to form communities.} } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_label_propagation}{\code{community_label_propagation()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_label_propagation}{\code{community_label_propagation}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_leading_eigen.Rd b/man/cluster_leading_eigen.Rd index 128c032acb1..a7108b5b2a5 100644 --- a/man/cluster_leading_eigen.Rd +++ b/man/cluster_leading_eigen.Rd @@ -124,7 +124,7 @@ is non-zero, then the clustering is terminated. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_leiden.Rd b/man/cluster_leiden.Rd index 041b65378ce..8400bca06b1 100644 --- a/man/cluster_leiden.Rd +++ b/man/cluster_leiden.Rd @@ -106,7 +106,7 @@ specify any \code{vertex_weights}, the correct vertex weights and scaling of \code{objective_function} argument. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_leiden}{\code{community_leiden()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_leiden}{\code{community_leiden}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_louvain.Rd b/man/cluster_louvain.Rd index 5e4d0bf7149..c62b22b9228 100644 --- a/man/cluster_louvain.Rd +++ b/man/cluster_louvain.Rd @@ -51,7 +51,7 @@ vertices are processed in a random order. This function was contributed by Tom Gregorovic. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_multilevel}{\code{community_multilevel()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_multilevel}{\code{community_multilevel}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_optimal.Rd b/man/cluster_optimal.Rd index 18cc85768ed..7a19e799305 100644 --- a/man/cluster_optimal.Rd +++ b/man/cluster_optimal.Rd @@ -63,7 +63,7 @@ print(modularity(fc)) } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_optimal_modularity}{\code{community_optimal_modularity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_optimal_modularity}{\code{community_optimal_modularity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \references{ diff --git a/man/cluster_spinglass.Rd b/man/cluster_spinglass.Rd index 89943f55726..2b65938686b 100644 --- a/man/cluster_spinglass.Rd +++ b/man/cluster_spinglass.Rd @@ -133,7 +133,7 @@ must be a vertex id, and the same energy function is used to find the community of the the given vertex. See also the examples below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/cluster_walktrap.Rd b/man/cluster_walktrap.Rd index 8cdc835f429..336f544d0da 100644 --- a/man/cluster_walktrap.Rd +++ b/man/cluster_walktrap.Rd @@ -53,7 +53,7 @@ algorithm, see Pascal Pons, Matthieu Latapy: Computing communities in large networks using random walks, https://arxiv.org/abs/physics/0512106 } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/clusters.Rd b/man/clusters.Rd index 554aa0f266a..4ce5efe0a5c 100644 --- a/man/clusters.Rd +++ b/man/clusters.Rd @@ -20,7 +20,7 @@ connected components to search. It is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/cocitation.Rd b/man/cocitation.Rd index e255875a6de..8e907d88495 100644 --- a/man/cocitation.Rd +++ b/man/cocitation.Rd @@ -39,7 +39,7 @@ costs the same amount of computation as for all vertices. This might change in the future. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_cocitation}{\code{cocitation()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_bibcoupling}{\code{bibcoupling()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_cocitation}{\code{cocitation}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_bibcoupling}{\code{bibcoupling}} } \examples{ diff --git a/man/cohesive.blocks.Rd b/man/cohesive.blocks.Rd index dc63ae7a51f..41534393e7f 100644 --- a/man/cohesive.blocks.Rd +++ b/man/cohesive.blocks.Rd @@ -26,7 +26,7 @@ cohesive blocks.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_cohesive_blocks}{\code{cohesive_blocks()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_cohesive_blocks}{\code{cohesive_blocks}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/cohesive_blocks.Rd b/man/cohesive_blocks.Rd index a0055aa0f47..c5d8bb58456 100644 --- a/man/cohesive_blocks.Rd +++ b/man/cohesive_blocks.Rd @@ -227,7 +227,7 @@ The generic function \code{\link[=plot]{plot()}} plots the graph, showing one or cohesive blocks in it. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_cohesive_blocks}{\code{cohesive_blocks()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_edgelist}{\code{write_graph_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_pajek}{\code{write_graph_pajek()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_graphml}{\code{write_graph_graphml()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_gml}{\code{write_graph_gml()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_dot}{\code{write_graph_dot()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_leda}{\code{write_graph_leda()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_cohesive_blocks}{\code{cohesive_blocks}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_edgelist}{\code{write_graph_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_pajek}{\code{write_graph_pajek}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_graphml}{\code{write_graph_graphml}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_gml}{\code{write_graph_gml}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_dot}{\code{write_graph_dot}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_leda}{\code{write_graph_leda}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}} } \examples{ diff --git a/man/communities.Rd b/man/communities.Rd index 75ea6b14a9e..35c6804dee8 100644 --- a/man/communities.Rd +++ b/man/communities.Rd @@ -239,7 +239,7 @@ corresponding to the communities. It passes additional arguments to \link{igraph.plotting} on how to change the plot. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/compare.Rd b/man/compare.Rd index 1cb301f44ce..6abdb24fc47 100644 --- a/man/compare.Rd +++ b/man/compare.Rd @@ -37,7 +37,7 @@ A real number. This function assesses the distance between two community structures. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_compare_communities}{\code{compare_communities()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_compare_communities}{\code{compare_communities}} } \examples{ diff --git a/man/complementer.Rd b/man/complementer.Rd index d3505eb5cb7..cc62671dca1 100644 --- a/man/complementer.Rd +++ b/man/complementer.Rd @@ -27,7 +27,7 @@ new graph. attributes are lost. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_complementer}{\code{complementer()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_complementer}{\code{complementer}} } \examples{ diff --git a/man/component_wise.Rd b/man/component_wise.Rd index 58e6296ff63..ef95e742299 100644 --- a/man/component_wise.Rd +++ b/man/component_wise.Rd @@ -16,7 +16,7 @@ to calculate the layout separately for each component of the graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/components.Rd b/man/components.Rd index 4c5d8284819..0e4ea0b16fa 100644 --- a/man/components.Rd +++ b/man/components.Rd @@ -85,7 +85,7 @@ The strongly connected components are implemented by two consecutive depth-first searches. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_connected}{\code{is_connected()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_connected_components}{\code{connected_components}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_connected}{\code{is_connected}} } \examples{ diff --git a/man/compose.Rd b/man/compose.Rd index 10284f7b8be..ec25e6418e6 100644 --- a/man/compose.Rd +++ b/man/compose.Rd @@ -62,7 +62,7 @@ g1 and g2, respectively, then (a,a) is included in the result. See \code{\link[=simplify]{simplify()}} if you want to get rid of the self-loops. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/connect.neighborhood.Rd b/man/connect.neighborhood.Rd index bb5a6af8fe5..4b9b08e4a34 100644 --- a/man/connect.neighborhood.Rd +++ b/man/connect.neighborhood.Rd @@ -27,7 +27,7 @@ argument is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_connect_neighborhood}{\code{connect_neighborhood()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_connect_neighborhood}{\code{connect_neighborhood}} } \keyword{internal} diff --git a/man/consensus_tree.Rd b/man/consensus_tree.Rd index 6e6c69a3061..b7b953c96dd 100644 --- a/man/consensus_tree.Rd +++ b/man/consensus_tree.Rd @@ -47,7 +47,7 @@ sampling from the given HRG. Otherwise it optimizes the HRG log-likelihood first, and then samples starting from the optimum. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_consensus}{\code{hrg_consensus()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_consensus}{\code{hrg_consensus}} } \seealso{ diff --git a/man/constraint.Rd b/man/constraint.Rd index d84760ebbfc..99aec867472 100644 --- a/man/constraint.Rd +++ b/man/constraint.Rd @@ -42,7 +42,7 @@ proportional tie strengths are defined as graph adjacency matrix. For isolated vertices, constraint is undefined. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_constraint}{\code{constraint()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_constraint}{\code{constraint}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/contract.Rd b/man/contract.Rd index 3186df65e69..ae1856348aa 100644 --- a/man/contract.Rd +++ b/man/contract.Rd @@ -29,7 +29,7 @@ unchanged, vertex attributes are combined, according to the \code{vertex.attr.comb} parameter. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_contract_vertices}{\code{contract_vertices()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_contract_vertices}{\code{contract_vertices}} } \examples{ diff --git a/man/contract.vertices.Rd b/man/contract.vertices.Rd index 14d99eea049..9faaffddc6a 100644 --- a/man/contract.vertices.Rd +++ b/man/contract.vertices.Rd @@ -27,7 +27,7 @@ the new graph. Please see \code{\link[=attribute.combination]{attribute.combinat consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_contract_vertices}{\code{contract_vertices()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_contract_vertices}{\code{contract_vertices}} } \keyword{internal} diff --git a/man/convex.hull.Rd b/man/convex.hull.Rd index 24d33b9f750..fb16532e523 100644 --- a/man/convex.hull.Rd +++ b/man/convex.hull.Rd @@ -16,7 +16,7 @@ convex.hull(data) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_convex_hull_2d}{\code{convex_hull_2d()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_convex_hull_2d}{\code{convex_hull_2d}} } \keyword{internal} diff --git a/man/convex_hull.Rd b/man/convex_hull.Rd index 6e05558398b..af0ff844407 100644 --- a/man/convex_hull.Rd +++ b/man/convex_hull.Rd @@ -25,7 +25,7 @@ Calculate the convex hull of a set of points, i.e. the covering polygon that has the smallest area. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_convex_hull_2d}{\code{convex_hull_2d()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_convex_hull_2d}{\code{convex_hull_2d}} } \examples{ diff --git a/man/coreness.Rd b/man/coreness.Rd index 665df6f55c4..2d820877595 100644 --- a/man/coreness.Rd +++ b/man/coreness.Rd @@ -31,7 +31,7 @@ subgraph of the k-core. This function calculates the coreness for each vertex. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_coreness}{\code{coreness()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_coreness}{\code{coreness}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/count.multiple.Rd b/man/count.multiple.Rd index 0f20b5b8750..97d2ac1ff19 100644 --- a/man/count.multiple.Rd +++ b/man/count.multiple.Rd @@ -19,7 +19,7 @@ all edges in the graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_count_multiple}{\code{count_multiple()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_count_multiple}{\code{count_multiple}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/count_automorphisms.Rd b/man/count_automorphisms.Rd index 4aa64bd0622..a72cea3058f 100644 --- a/man/count_automorphisms.Rd +++ b/man/count_automorphisms.Rd @@ -76,7 +76,7 @@ automorphisms themselves, use \code{\link[=automorphism_group]{automorphism_grou a compact representation of the automorphism group. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/count_isomorphisms.Rd b/man/count_isomorphisms.Rd index c0d27ec0fe9..69722eb82e7 100644 --- a/man/count_isomorphisms.Rd +++ b/man/count_isomorphisms.Rd @@ -24,7 +24,7 @@ Number of isomorphic mappings between the two graphs. Count the number of isomorphic mappings between two graphs } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_isomorphisms_vf2}{\code{count_isomorphisms_vf2()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_isomorphisms_vf2}{\code{count_isomorphisms_vf2}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/count_motifs.Rd b/man/count_motifs.Rd index bf4af497dbd..49c2d26a310 100644 --- a/man/count_motifs.Rd +++ b/man/count_motifs.Rd @@ -28,7 +28,7 @@ structure. These functions search a graph for various motifs. size in graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_no}{\code{motifs_randesu_no()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_no}{\code{motifs_randesu_no}} } \examples{ diff --git a/man/count_reachable.Rd b/man/count_reachable.Rd index 57bcce0078a..6f4cb81e917 100644 --- a/man/count_reachable.Rd +++ b/man/count_reachable.Rd @@ -35,7 +35,7 @@ For undirected graphs, two vertices are reachable from each other if they are in the same connected component. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_count_reachable}{\code{count_reachable()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_count_reachable}{\code{count_reachable}} } \examples{ diff --git a/man/count_subgraph_isomorphisms.Rd b/man/count_subgraph_isomorphisms.Rd index 20b073ef8c7..83bdeb45273 100644 --- a/man/count_subgraph_isomorphisms.Rd +++ b/man/count_subgraph_isomorphisms.Rd @@ -72,7 +72,7 @@ If you want to ignore these attributes, then supply \code{NULL} for both of thes } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_subisomorphisms_vf2}{\code{count_subisomorphisms_vf2()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_subisomorphisms_vf2}{\code{count_subisomorphisms_vf2}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \references{ diff --git a/man/count_triangles.Rd b/man/count_triangles.Rd index cc378288cea..cb391506d1e 100644 --- a/man/count_triangles.Rd +++ b/man/count_triangles.Rd @@ -36,7 +36,7 @@ to the first triangle, etc. \code{count_triangles()} counts how many triangles a vertex is part of. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_list_triangles}{\code{list_triangles()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_count_adjacent_triangles}{\code{count_adjacent_triangles()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_list_triangles}{\code{list_triangles}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_count_adjacent_triangles}{\code{count_adjacent_triangles}} } \examples{ diff --git a/man/curve_multiple.Rd b/man/curve_multiple.Rd index 851137a1d34..627f03f7e51 100644 --- a/man/curve_multiple.Rd +++ b/man/curve_multiple.Rd @@ -26,7 +26,7 @@ are visible. plotting a graph with multiple edges, so that all edges are visible. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/decompose.Rd b/man/decompose.Rd index 6fd46bbe4da..87c6ea71cfc 100644 --- a/man/decompose.Rd +++ b/man/decompose.Rd @@ -30,7 +30,7 @@ A list of graph objects. Creates a separate graph for each connected component of a graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose}} } \examples{ diff --git a/man/decompose.graph.Rd b/man/decompose.graph.Rd index 2065be1e2c1..7702d5a5173 100644 --- a/man/decompose.graph.Rd +++ b/man/decompose.graph.Rd @@ -35,7 +35,7 @@ isolate vertices.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_decompose}{\code{decompose}} } \keyword{internal} diff --git a/man/degree.Rd b/man/degree.Rd index dc40c4696c0..3098ab10660 100644 --- a/man/degree.Rd +++ b/man/degree.Rd @@ -68,7 +68,7 @@ The degree of a vertex is its most basic structural property, the number of its adjacent edges. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_maxdegree}{\code{maxdegree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_mean_degree}{\code{mean_degree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_maxdegree}{\code{maxdegree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_mean_degree}{\code{mean_degree}} } \examples{ diff --git a/man/degree.distribution.Rd b/man/degree.distribution.Rd index 69d71e21734..a822ad91728 100644 --- a/man/degree.distribution.Rd +++ b/man/degree.distribution.Rd @@ -21,7 +21,7 @@ be calculated.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_degree}{\code{degree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/degree.sequence.game.Rd b/man/degree.sequence.game.Rd index f4ddb22e73f..1b4f97d9d48 100644 --- a/man/degree.sequence.game.Rd +++ b/man/degree.sequence.game.Rd @@ -28,7 +28,7 @@ should be even. For directed graphs its sum should be the same as the sum of consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_degree_sequence_game}{\code{degree_sequence_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_degree_sequence_game}{\code{degree_sequence_game}} } \keyword{internal} diff --git a/man/delete.edges.Rd b/man/delete.edges.Rd index 3c0a70138f7..e05943e5676 100644 --- a/man/delete.edges.Rd +++ b/man/delete.edges.Rd @@ -21,7 +21,7 @@ containing the IDs or names of the source and target vertices, separated by consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_edges}{\code{delete_edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_edges}{\code{delete_edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/delete.vertices.Rd b/man/delete.vertices.Rd index a956f6e4657..d35f2a0ddfc 100644 --- a/man/delete.vertices.Rd +++ b/man/delete.vertices.Rd @@ -18,7 +18,7 @@ delete.vertices(graph, v) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_vertices}{\code{delete_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_vertices}{\code{delete_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/delete_edges.Rd b/man/delete_edges.Rd index 7aabfab9e3a..1d685a8b1da 100644 --- a/man/delete_edges.Rd +++ b/man/delete_edges.Rd @@ -21,7 +21,7 @@ The graph, with the edges removed. Delete edges from a graph } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_edges}{\code{delete_edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_edges}{\code{delete_edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/delete_vertices.Rd b/man/delete_vertices.Rd index 1f206b2983a..2e83c0c0ba3 100644 --- a/man/delete_vertices.Rd +++ b/man/delete_vertices.Rd @@ -18,7 +18,7 @@ The graph, with the vertices removed. Delete vertices from a graph } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_vertices}{\code{delete_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_delete_vertices}{\code{delete_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/dfs.Rd b/man/dfs.Rd index ea6f20e7f09..ecd57c303b1 100644 --- a/man/dfs.Rd +++ b/man/dfs.Rd @@ -119,7 +119,7 @@ The extra argument. to terminate it. See examples below on how to use the callback functions. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/diameter.Rd b/man/diameter.Rd index c961c954447..ba86e673d93 100644 --- a/man/diameter.Rd +++ b/man/diameter.Rd @@ -55,7 +55,7 @@ one found. connected by the diameter path. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/difference.igraph.Rd b/man/difference.igraph.Rd index 03938205175..1996af8173d 100644 --- a/man/difference.igraph.Rd +++ b/man/difference.igraph.Rd @@ -44,7 +44,7 @@ Note that \code{big} and \code{small} must both be directed or both be undirected, otherwise an error message is given. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_difference}{\code{difference()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_difference}{\code{difference}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices}} } \examples{ diff --git a/man/dim_select.Rd b/man/dim_select.Rd index 60802350d57..939f793f9ba 100644 --- a/man/dim_select.Rd +++ b/man/dim_select.Rd @@ -34,7 +34,7 @@ distributions, with different means, and we want to know their border. See examples below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_dim_select}{\code{dim_select()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_dim_select}{\code{dim_select}} } \examples{ diff --git a/man/disjoint_union.Rd b/man/disjoint_union.Rd index 87b27fb98d0..4836b744843 100644 --- a/man/disjoint_union.Rd +++ b/man/disjoint_union.Rd @@ -43,7 +43,7 @@ An error is generated if some input graphs are directed and others are undirected. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/distances.Rd b/man/distances.Rd index c22255564db..d1b3c793460 100644 --- a/man/distances.Rd +++ b/man/distances.Rd @@ -248,7 +248,7 @@ directions are considered, so every pair of vertices appears twice in the histogram. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_path_length_hist}{\code{path_length_hist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_path_length_dijkstra}{\code{average_path_length_dijkstra()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths}{\code{get_all_shortest_paths()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths_dijkstra}{\code{get_all_shortest_paths_dijkstra()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_path_length_hist}{\code{path_length_hist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_path_length_dijkstra}{\code{average_path_length_dijkstra}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths}{\code{get_all_shortest_paths}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths_dijkstra}{\code{get_all_shortest_paths_dijkstra}} } \examples{ diff --git a/man/diversity.Rd b/man/diversity.Rd index 8d2a72d33fa..aaa8363446b 100644 --- a/man/diversity.Rd +++ b/man/diversity.Rd @@ -36,7 +36,7 @@ sum(w[i,l], l=1..k[i]),} and \eqn{k_i}{k[i]} is the (total) degree of vertex For vertices with degree less than two the function returns \code{NaN}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_diversity}{\code{diversity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_diversity}{\code{diversity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/dominator.tree.Rd b/man/dominator.tree.Rd index a60f1945c4e..afafc01e63c 100644 --- a/man/dominator.tree.Rd +++ b/man/dominator.tree.Rd @@ -25,7 +25,7 @@ the original one in the input graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_dominator_tree}{\code{dominator_tree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_dominator_tree}{\code{dominator_tree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/dominator_tree.Rd b/man/dominator_tree.Rd index afd20cb92fb..2fd7bd2ecd8 100644 --- a/man/dominator_tree.Rd +++ b/man/dominator_tree.Rd @@ -56,7 +56,7 @@ This function implements the Lengauer-Tarjan algorithm to construct the dominator tree of a directed graph. For details see the reference below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_dominator_tree}{\code{dominator_tree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_dominator_tree}{\code{dominator_tree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/dot-apply_modifiers.Rd b/man/dot-apply_modifiers.Rd index 07c64014394..33317931c85 100644 --- a/man/dot-apply_modifiers.Rd +++ b/man/dot-apply_modifiers.Rd @@ -19,7 +19,7 @@ This is a helper function for the common parts of \code{make_()} and \code{sample_()}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/dyad.census.Rd b/man/dyad.census.Rd index a176ca42486..1be3e724b7d 100644 --- a/man/dyad.census.Rd +++ b/man/dyad.census.Rd @@ -16,7 +16,7 @@ dyad.census(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_dyad_census}{\code{dyad_census()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_dyad_census}{\code{dyad_census}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}} } \keyword{internal} diff --git a/man/dyad_census.Rd b/man/dyad_census.Rd index ae76d40ea5c..f6641612894 100644 --- a/man/dyad_census.Rd +++ b/man/dyad_census.Rd @@ -29,7 +29,7 @@ vertices is measured. It can be in three states: mutual, asymmetric or non-existent. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_dyad_census}{\code{dyad_census()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_dyad_census}{\code{dyad_census}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}} } \examples{ diff --git a/man/eccentricity.Rd b/man/eccentricity.Rd index 245971a6bfe..387c9950ccb 100644 --- a/man/eccentricity.Rd +++ b/man/eccentricity.Rd @@ -49,7 +49,7 @@ This implementation ignores vertex pairs that are in different components. Isolate vertices have eccentricity zero. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eccentricity_dijkstra}{\code{eccentricity_dijkstra()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eccentricity_dijkstra}{\code{eccentricity_dijkstra}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/edge.betweenness.Rd b/man/edge.betweenness.Rd index 7084de3a29f..c99e16eb871 100644 --- a/man/edge.betweenness.Rd +++ b/man/edge.betweenness.Rd @@ -35,7 +35,7 @@ betweenness. If negative, then there is no such limit.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/edge.betweenness.community.Rd b/man/edge.betweenness.community.Rd index 5cc2d41f5f1..fb773b18838 100644 --- a/man/edge.betweenness.community.Rd +++ b/man/edge.betweenness.community.Rd @@ -63,7 +63,7 @@ vector corresponding to the highest possible modularity score.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/edge.connectivity.Rd b/man/edge.connectivity.Rd index 398f50b98c9..124abb22c47 100644 --- a/man/edge.connectivity.Rd +++ b/man/edge.connectivity.Rd @@ -30,7 +30,7 @@ thanks Peter.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/edge.disjoint.paths.Rd b/man/edge.disjoint.paths.Rd index b8a84f74cc6..27ec7c6c540 100644 --- a/man/edge.disjoint.paths.Rd +++ b/man/edge.disjoint.paths.Rd @@ -30,7 +30,7 @@ thanks Peter.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/edge_attr.Rd b/man/edge_attr.Rd index 23877ff660a..1bbc5b13cc9 100644 --- a/man/edge_attr.Rd +++ b/man/edge_attr.Rd @@ -24,7 +24,7 @@ edge attributes if \code{name} is missing. Query edge attributes of a graph } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/edge_connectivity.Rd b/man/edge_connectivity.Rd index 2c920c2facc..9d95f5df505 100644 --- a/man/edge_connectivity.Rd +++ b/man/edge_connectivity.Rd @@ -82,7 +82,7 @@ included only for having more descriptive function names. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_disjoint_paths}{\code{edge_disjoint_paths()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_adhesion}{\code{adhesion()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_edge_connectivity}{\code{st_edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_connectivity}{\code{edge_connectivity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_edge_disjoint_paths}{\code{edge_disjoint_paths}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_adhesion}{\code{adhesion}} } \examples{ diff --git a/man/edge_density.Rd b/man/edge_density.Rd index f0ff20a804d..36c061211ec 100644 --- a/man/edge_density.Rd +++ b/man/edge_density.Rd @@ -29,7 +29,7 @@ does not check whether the graph has multi-edges and will return meaningless results for such graphs. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density}} } \examples{ diff --git a/man/ego.Rd b/man/ego.Rd index e6903bbf88d..2ded03f3109 100644 --- a/man/ego.Rd +++ b/man/ego.Rd @@ -117,7 +117,7 @@ the vertex, edge and graph attributes. all other vertices in its neighborhood. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_connect_neighborhood}{\code{connect_neighborhood()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_connect_neighborhood}{\code{connect_neighborhood}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/eigen_centrality.Rd b/man/eigen_centrality.Rd index 1f838d49edc..9e285fe2fab 100644 --- a/man/eigen_centrality.Rd +++ b/man/eigen_centrality.Rd @@ -97,7 +97,7 @@ From igraph version 0.5 this function uses ARPACK for the underlying computation, see \code{\link[=arpack]{arpack()}} for more about ARPACK in igraph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eigenvector_centrality}{\code{eigenvector_centrality()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eigenvector_centrality}{\code{eigenvector_centrality}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/embed_adjacency_matrix.Rd b/man/embed_adjacency_matrix.Rd index e23aa38f717..40237355f45 100644 --- a/man/embed_adjacency_matrix.Rd +++ b/man/embed_adjacency_matrix.Rd @@ -89,7 +89,7 @@ sqrt(D[no])}. (For undirected graphs \eqn{U=V}, so it is enough to keep one of them.) } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_adjacency_spectral_embedding}{\code{adjacency_spectral_embedding()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_adjacency_spectral_embedding}{\code{adjacency_spectral_embedding}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/embed_laplacian_matrix.Rd b/man/embed_laplacian_matrix.Rd index 186b23d07c1..637fa920cd2 100644 --- a/man/embed_laplacian_matrix.Rd +++ b/man/embed_laplacian_matrix.Rd @@ -95,7 +95,7 @@ They are essentially doing the same as \code{\link[=embed_adjacency_matrix]{embe but work on the Laplacian matrix, instead of the adjacency matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_laplacian_spectral_embedding}{\code{laplacian_spectral_embedding()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Embedding.html#igraph_laplacian_spectral_embedding}{\code{laplacian_spectral_embedding}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/ends.Rd b/man/ends.Rd index 0387709896b..d3997fb71e9 100644 --- a/man/ends.Rd +++ b/man/ends.Rd @@ -22,7 +22,7 @@ A two column matrix of vertex names or vertex ids. Incident vertices of some graph edges } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/erdos.renyi.game.Rd b/man/erdos.renyi.game.Rd index fc3f42efc98..018b1d078fb 100644 --- a/man/erdos.renyi.game.Rd +++ b/man/erdos.renyi.game.Rd @@ -41,7 +41,7 @@ Since igraph version 0.8.0, both \code{erdos.renyi.game()} and \code{random.graph.game()} is an (also deprecated) alias to this function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_erdos_renyi_game_gnp}{\code{erdos_renyi_game_gnp()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_erdos_renyi_game_gnm}{\code{erdos_renyi_game_gnm()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_erdos_renyi_game_gnp}{\code{erdos_renyi_game_gnp}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_erdos_renyi_game_gnm}{\code{erdos_renyi_game_gnm}} } \examples{ diff --git a/man/establishment.game.Rd b/man/establishment.game.Rd index 35c226542df..6156c90d772 100644 --- a/man/establishment.game.Rd +++ b/man/establishment.game.Rd @@ -35,7 +35,7 @@ types. These should be probabilities, i.e. numbers between zero and one.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_establishment_game}{\code{establishment_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_establishment_game}{\code{establishment_game}} } \keyword{internal} diff --git a/man/estimate_betweenness.Rd b/man/estimate_betweenness.Rd index b56c96035f9..230c5a9972a 100644 --- a/man/estimate_betweenness.Rd +++ b/man/estimate_betweenness.Rd @@ -35,7 +35,7 @@ so they are interpreted as distances.} Use \code{\link[=betweenness]{betweenness()}} with the \code{cutoff} argument instead. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_betweenness_cutoff}{\code{betweenness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_betweenness_cutoff}{\code{betweenness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/estimate_closeness.Rd b/man/estimate_closeness.Rd index 0b6fb83b1a4..0c35c428bbf 100644 --- a/man/estimate_closeness.Rd +++ b/man/estimate_closeness.Rd @@ -43,7 +43,7 @@ all reachable vertices.} Use \code{\link[=closeness]{closeness()}} with the \code{cutoff} argument instead. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_closeness_cutoff}{\code{closeness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_closeness_cutoff}{\code{closeness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/estimate_edge_betweenness.Rd b/man/estimate_edge_betweenness.Rd index b5ebe0531dd..7461016981a 100644 --- a/man/estimate_edge_betweenness.Rd +++ b/man/estimate_edge_betweenness.Rd @@ -34,7 +34,7 @@ so they are interpreted as distances.} Use \code{\link[=edge_betweenness]{edge_betweenness()}} with the \code{cutoff} argument instead. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_edge_betweenness_cutoff}{\code{edge_betweenness_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/evcent.Rd b/man/evcent.Rd index 838f58d6ca8..a6e0f6ed63a 100644 --- a/man/evcent.Rd +++ b/man/evcent.Rd @@ -43,7 +43,7 @@ weights spread the centrality better.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eigenvector_centrality}{\code{eigenvector_centrality()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_eigenvector_centrality}{\code{eigenvector_centrality}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/exportPajek.Rd b/man/exportPajek.Rd index ccb5ef9fb61..21f89720299 100644 --- a/man/exportPajek.Rd +++ b/man/exportPajek.Rd @@ -38,7 +38,7 @@ See details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_edgelist}{\code{write_graph_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_pajek}{\code{write_graph_pajek()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_graphml}{\code{write_graph_graphml()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_gml}{\code{write_graph_gml()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_dot}{\code{write_graph_dot()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_leda}{\code{write_graph_leda()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_edgelist}{\code{write_graph_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_pajek}{\code{write_graph_pajek}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_graphml}{\code{write_graph_graphml}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_gml}{\code{write_graph_gml}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_dot}{\code{write_graph_dot}}, \href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_write_graph_leda}{\code{write_graph_leda}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/farthest.nodes.Rd b/man/farthest.nodes.Rd index a9ce78a850c..87862471ed0 100644 --- a/man/farthest.nodes.Rd +++ b/man/farthest.nodes.Rd @@ -29,7 +29,7 @@ used by default.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/fastgreedy.community.Rd b/man/fastgreedy.community.Rd index 957bf210ba7..0b374043f3f 100644 --- a/man/fastgreedy.community.Rd +++ b/man/fastgreedy.community.Rd @@ -40,7 +40,7 @@ edge weight means a stronger connection for this function.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/feedback_arc_set.Rd b/man/feedback_arc_set.Rd index 9771c803583..d62f8170f6c 100644 --- a/man/feedback_arc_set.Rd +++ b/man/feedback_arc_set.Rd @@ -39,7 +39,7 @@ arc set ensures that the remaining graph is a forest (i.e. every connected component is a tree). } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_feedback_arc_set}{\code{feedback_arc_set()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_feedback_arc_set}{\code{feedback_arc_set}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/feedback_vertex_set.Rd b/man/feedback_vertex_set.Rd index 665554fc563..9d095a2b731 100644 --- a/man/feedback_vertex_set.Rd +++ b/man/feedback_vertex_set.Rd @@ -31,7 +31,7 @@ all cycles in the graph. Finding a \emph{minimum} feedback vertex set is an NP-complete problem, both on directed and undirected graphs. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_feedback_vertex_set}{\code{feedback_vertex_set()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_feedback_vertex_set}{\code{feedback_vertex_set}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/find_cycle.Rd b/man/find_cycle.Rd index bde1a9a54e3..7f795d0f4bd 100644 --- a/man/find_cycle.Rd +++ b/man/find_cycle.Rd @@ -29,7 +29,7 @@ Use \code{\link[=is_acyclic]{is_acyclic()}} to determine if a graph has cycles, a specific cycle. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_find_cycle}{\code{find_cycle()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_find_cycle}{\code{find_cycle}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \examples{ diff --git a/man/fit_hrg.Rd b/man/fit_hrg.Rd index d2467ad4634..4ca8a935158 100644 --- a/man/fit_hrg.Rd +++ b/man/fit_hrg.Rd @@ -58,7 +58,7 @@ from a given HRG, if this is given in the \code{hrg()} argument and the \code{as.hclust()} provided in this package. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_fit}{\code{hrg_fit()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_fit}{\code{hrg_fit}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/forest.fire.game.Rd b/man/forest.fire.game.Rd index 730a969ef54..5bc146fb7c6 100644 --- a/man/forest.fire.game.Rd +++ b/man/forest.fire.game.Rd @@ -25,7 +25,7 @@ probability is calculated as \code{bw.factor*fw.prob}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_forest_fire_game}{\code{forest_fire_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_forest_fire_game}{\code{forest_fire_game}} } \keyword{internal} diff --git a/man/from_incidence_matrix.Rd b/man/from_incidence_matrix.Rd index 2f2294fc343..9ad245fb934 100644 --- a/man/from_incidence_matrix.Rd +++ b/man/from_incidence_matrix.Rd @@ -18,7 +18,7 @@ Some authors refer to the bipartite adjacency matrix as the this naming to avoid confusion with the edge-vertex incidence matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.adjacency.Rd b/man/get.adjacency.Rd index fcab543222c..f9f122468a9 100644 --- a/man/get.adjacency.Rd +++ b/man/get.adjacency.Rd @@ -53,7 +53,7 @@ matrices.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency}{\code{get_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_adjacency_sparse}{\code{get_adjacency_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.adjedgelist.Rd b/man/get.adjedgelist.Rd index c09b64002a1..88ff783d234 100644 --- a/man/get.adjedgelist.Rd +++ b/man/get.adjedgelist.Rd @@ -29,7 +29,7 @@ is not allowed for directed graphs and will be replaced with \code{"once"}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.adjlist.Rd b/man/get.adjlist.Rd index e35c005240f..30fdcb535a7 100644 --- a/man/get.adjlist.Rd +++ b/man/get.adjlist.Rd @@ -33,7 +33,7 @@ of each set of parallel edges.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/get.all.shortest.paths.Rd b/man/get.all.shortest.paths.Rd index 6805146d663..cf37658bbe3 100644 --- a/man/get.all.shortest.paths.Rd +++ b/man/get.all.shortest.paths.Rd @@ -44,7 +44,7 @@ of a path is the sum of the weights of its constituent edges.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths}{\code{get_all_shortest_paths()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths_dijkstra}{\code{get_all_shortest_paths_dijkstra()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths}{\code{get_all_shortest_paths}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_all_shortest_paths_dijkstra}{\code{get_all_shortest_paths_dijkstra}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.data.frame.Rd b/man/get.data.frame.Rd index 39ab6b425b1..a3a6214fad7 100644 --- a/man/get.data.frame.Rd +++ b/man/get.data.frame.Rd @@ -19,7 +19,7 @@ edges, or both. The default is \sQuote{edges}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/get.diameter.Rd b/man/get.diameter.Rd index 06560f3b4d6..b84cddc5874 100644 --- a/man/get.diameter.Rd +++ b/man/get.diameter.Rd @@ -29,7 +29,7 @@ used by default.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.edge.attribute.Rd b/man/get.edge.attribute.Rd index 2a8249a075d..0cdfc8d758e 100644 --- a/man/get.edge.attribute.Rd +++ b/man/get.edge.attribute.Rd @@ -22,7 +22,7 @@ for a subset of edges.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.edge.ids.Rd b/man/get.edge.ids.Rd index eaa81b44085..ad699c39ccc 100644 --- a/man/get.edge.ids.Rd +++ b/man/get.edge.ids.Rd @@ -30,7 +30,7 @@ returned for the non-existant edge(s).} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}} } \keyword{internal} diff --git a/man/get.edgelist.Rd b/man/get.edgelist.Rd index dd2da5d61ac..b32c423f810 100644 --- a/man/get.edgelist.Rd +++ b/man/get.edgelist.Rd @@ -20,7 +20,7 @@ vertex ids.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/get.incidence.Rd b/man/get.incidence.Rd index b4f40697fb6..8eefca9c436 100644 --- a/man/get.incidence.Rd +++ b/man/get.incidence.Rd @@ -36,7 +36,7 @@ created, you will need the \code{Matrix} package for this.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_get_biadjacency}{\code{get_biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.shortest.paths.Rd b/man/get.shortest.paths.Rd index 606cb1d1c09..53405aa2907 100644 --- a/man/get.shortest.paths.Rd +++ b/man/get.shortest.paths.Rd @@ -80,7 +80,7 @@ used, regardless of this argument.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \keyword{internal} diff --git a/man/get.stochastic.Rd b/man/get.stochastic.Rd index df4c0d29b32..038573400d7 100644 --- a/man/get.stochastic.Rd +++ b/man/get.stochastic.Rd @@ -26,7 +26,7 @@ sum up to one; otherwise it is the columns.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_stochastic}{\code{get_stochastic()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_stochastic_sparse}{\code{get_stochastic_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_stochastic}{\code{get_stochastic}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_stochastic_sparse}{\code{get_stochastic_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/get.vertex.attribute.Rd b/man/get.vertex.attribute.Rd index 77bad90850a..66146ded347 100644 --- a/man/get.vertex.attribute.Rd +++ b/man/get.vertex.attribute.Rd @@ -22,7 +22,7 @@ for these vertices.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/get_edge_ids.Rd b/man/get_edge_ids.Rd index 262d17f1bb9..a5e9731eea5 100644 --- a/man/get_edge_ids.Rd +++ b/man/get_edge_ids.Rd @@ -40,7 +40,7 @@ This function allows finding the edges of the graph, via their incident vertices. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}} } \examples{ diff --git a/man/girth.Rd b/man/girth.Rd index aa27e8ebb6e..b3d346834db 100644 --- a/man/girth.Rd +++ b/man/girth.Rd @@ -37,7 +37,7 @@ symposium on Theory of computing}, 1-10, 1977. The first implementation of this function was done by Keith Briggs, thanks Keith. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/global_efficiency.Rd b/man/global_efficiency.Rd index c3df23056cb..fb9347a856c 100644 --- a/man/global_efficiency.Rd +++ b/man/global_efficiency.Rd @@ -90,7 +90,7 @@ efficiency above. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_global_efficiency}{\code{global_efficiency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_efficiency}{\code{local_efficiency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_local_efficiency}{\code{average_local_efficiency()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_global_efficiency}{\code{global_efficiency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_efficiency}{\code{local_efficiency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_average_local_efficiency}{\code{average_local_efficiency}} } \examples{ diff --git a/man/gorder.Rd b/man/gorder.Rd index 805034f3a1b..b1e6d7593bb 100644 --- a/man/gorder.Rd +++ b/man/gorder.Rd @@ -19,7 +19,7 @@ Number of vertices, numeric scalar. \code{vcount()} and \code{gorder()} are aliases. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/graph.Rd b/man/graph.Rd index 9b48a955567..b3d2e2a0bd2 100644 --- a/man/graph.Rd +++ b/man/graph.Rd @@ -59,7 +59,7 @@ Do not give both of them.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.adhesion.Rd b/man/graph.adhesion.Rd index b5ef47f9a7e..8a960f28ec4 100644 --- a/man/graph.adhesion.Rd +++ b/man/graph.adhesion.Rd @@ -24,7 +24,7 @@ thanks Peter.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_adhesion}{\code{adhesion()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_adhesion}{\code{adhesion}} } \keyword{internal} diff --git a/man/graph.adjacency.Rd b/man/graph.adjacency.Rd index 0c91cc2d348..e6fa3e3bcfa 100644 --- a/man/graph.adjacency.Rd +++ b/man/graph.adjacency.Rd @@ -55,7 +55,7 @@ former is ignored.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjacency}{\code{adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_weighted_adjacency}{\code{weighted_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjacency}{\code{adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_weighted_adjacency}{\code{weighted_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.adjlist.Rd b/man/graph.adjlist.Rd index 8e2895891b2..f15986e4189 100644 --- a/man/graph.adjlist.Rd +++ b/man/graph.adjlist.Rd @@ -31,7 +31,7 @@ This argument is ignored if \code{mode} is \code{out} or \verb{in}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist}} } \keyword{internal} diff --git a/man/graph.atlas.Rd b/man/graph.atlas.Rd index 8d465cc1cad..98bf5f6772c 100644 --- a/man/graph.atlas.Rd +++ b/man/graph.atlas.Rd @@ -16,7 +16,7 @@ graph.atlas(n) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_atlas}{\code{atlas()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_atlas}{\code{atlas}} } \keyword{internal} diff --git a/man/graph.automorphisms.Rd b/man/graph.automorphisms.Rd index bf5a5676697..ebdb5772e47 100644 --- a/man/graph.automorphisms.Rd +++ b/man/graph.automorphisms.Rd @@ -44,7 +44,7 @@ first smallest maximally non-trivially connected non-singleton cell.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_count_automorphisms}{\code{count_automorphisms}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.bfs.Rd b/man/graph.bfs.Rd index 97ee8580ca9..c63ff68520d 100644 --- a/man/graph.bfs.Rd +++ b/man/graph.bfs.Rd @@ -75,7 +75,7 @@ from igraph 1.3.0; use \code{mode} instead.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.bipartite.Rd b/man/graph.bipartite.Rd index ce32bf3e77b..cb494e699d7 100644 --- a/man/graph.bipartite.Rd +++ b/man/graph.bipartite.Rd @@ -28,7 +28,7 @@ bipartite graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_create_bipartite}{\code{create_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_create_bipartite}{\code{create_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.complementer.Rd b/man/graph.complementer.Rd index 50b1be3a6fd..d44b6cd0534 100644 --- a/man/graph.complementer.Rd +++ b/man/graph.complementer.Rd @@ -18,7 +18,7 @@ graph.complementer(graph, loops = FALSE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_complementer}{\code{complementer()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_complementer}{\code{complementer}} } \keyword{internal} diff --git a/man/graph.compose.Rd b/man/graph.compose.Rd index 8cd2dd7d4fe..1d912274b9f 100644 --- a/man/graph.compose.Rd +++ b/man/graph.compose.Rd @@ -24,7 +24,7 @@ but not both graphs are named.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.coreness.Rd b/man/graph.coreness.Rd index 2c224282090..b79dc6cd4d1 100644 --- a/man/graph.coreness.Rd +++ b/man/graph.coreness.Rd @@ -21,7 +21,7 @@ argument is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_coreness}{\code{coreness()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_coreness}{\code{coreness}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.data.frame.Rd b/man/graph.data.frame.Rd index 7b87f3a650a..d049e2b0156 100644 --- a/man/graph.data.frame.Rd +++ b/man/graph.data.frame.Rd @@ -25,7 +25,7 @@ with \code{as.data.frame}, if not \code{NULL}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.de.bruijn.Rd b/man/graph.de.bruijn.Rd index 48f3160ed40..4028cca7f79 100644 --- a/man/graph.de.bruijn.Rd +++ b/man/graph.de.bruijn.Rd @@ -18,7 +18,7 @@ graph.de.bruijn(m, n) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_de_bruijn}{\code{de_bruijn()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_de_bruijn}{\code{de_bruijn}} } \keyword{internal} diff --git a/man/graph.density.Rd b/man/graph.density.Rd index 704159818f9..4bba0221a0a 100644 --- a/man/graph.density.Rd +++ b/man/graph.density.Rd @@ -21,7 +21,7 @@ the result will not be meaningful.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density}} } \keyword{internal} diff --git a/man/graph.dfs.Rd b/man/graph.dfs.Rd index 332e2674268..1be52dd5f07 100644 --- a/man/graph.dfs.Rd +++ b/man/graph.dfs.Rd @@ -67,7 +67,7 @@ algorithm. See details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.disjoint.union.Rd b/man/graph.disjoint.union.Rd index 860eec15e51..334e22011a5 100644 --- a/man/graph.disjoint.union.Rd +++ b/man/graph.disjoint.union.Rd @@ -16,7 +16,7 @@ graph.disjoint.union(...) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.diversity.Rd b/man/graph.diversity.Rd index db8b87a013b..357aad02218 100644 --- a/man/graph.diversity.Rd +++ b/man/graph.diversity.Rd @@ -22,7 +22,7 @@ that this measure is not defined for unweighted graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_diversity}{\code{diversity()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_diversity}{\code{diversity}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.edgelist.Rd b/man/graph.edgelist.Rd index d1b9690ed6f..363b801a9db 100644 --- a/man/graph.edgelist.Rd +++ b/man/graph.edgelist.Rd @@ -18,7 +18,7 @@ graph.edgelist(el, directed = TRUE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}} } \keyword{internal} diff --git a/man/graph.empty.Rd b/man/graph.empty.Rd index 651e243fd38..5ebf330c526 100644 --- a/man/graph.empty.Rd +++ b/man/graph.empty.Rd @@ -18,7 +18,7 @@ graph.empty(n = 0, directed = TRUE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}} } \keyword{internal} diff --git a/man/graph.extended.chordal.ring.Rd b/man/graph.extended.chordal.ring.Rd index 6d1b0a83a04..14c2de1d743 100644 --- a/man/graph.extended.chordal.ring.Rd +++ b/man/graph.extended.chordal.ring.Rd @@ -21,7 +21,7 @@ details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_extended_chordal_ring}{\code{extended_chordal_ring()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_extended_chordal_ring}{\code{extended_chordal_ring}} } \keyword{internal} diff --git a/man/graph.famous.Rd b/man/graph.famous.Rd index 9469016b8e1..6606e3bd78f 100644 --- a/man/graph.famous.Rd +++ b/man/graph.famous.Rd @@ -59,7 +59,7 @@ Do not give both of them.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.formula.Rd b/man/graph.formula.Rd index 024b15a5574..b73f9311b05 100644 --- a/man/graph.formula.Rd +++ b/man/graph.formula.Rd @@ -22,7 +22,7 @@ multiple edges are removed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}} } \keyword{internal} diff --git a/man/graph.full.Rd b/man/graph.full.Rd index 078a76cdf0c..8f4c3759fb3 100644 --- a/man/graph.full.Rd +++ b/man/graph.full.Rd @@ -20,7 +20,7 @@ graph.full(n, directed = FALSE, loops = FALSE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_full}{\code{full()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_full}{\code{full}} } \keyword{internal} diff --git a/man/graph.full.bipartite.Rd b/man/graph.full.bipartite.Rd index 2bc9cd007f5..73c4c4e2899 100644 --- a/man/graph.full.bipartite.Rd +++ b/man/graph.full.bipartite.Rd @@ -26,7 +26,7 @@ ignored for undirected graphs.x} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_full_bipartite}{\code{full_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_full_bipartite}{\code{full_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.full.citation.Rd b/man/graph.full.citation.Rd index 8f95b2d5c42..928facb2918 100644 --- a/man/graph.full.citation.Rd +++ b/man/graph.full.citation.Rd @@ -18,7 +18,7 @@ graph.full.citation(n, directed = TRUE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_full_citation}{\code{full_citation()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_full_citation}{\code{full_citation}} } \keyword{internal} diff --git a/man/graph.graphdb.Rd b/man/graph.graphdb.Rd index 7dc2debef6b..81581b9db30 100644 --- a/man/graph.graphdb.Rd +++ b/man/graph.graphdb.Rd @@ -54,7 +54,7 @@ suffix is added to the filename.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_read_graph_graphdb}{\code{read_graph_graphdb()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_read_graph_graphdb}{\code{read_graph_graphdb}} } \keyword{internal} diff --git a/man/graph.incidence.Rd b/man/graph.incidence.Rd index 7f61c4c7d6c..b1ecefe9659 100644 --- a/man/graph.incidence.Rd +++ b/man/graph.incidence.Rd @@ -54,7 +54,7 @@ type) will be added.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.isocreate.Rd b/man/graph.isocreate.Rd index 9b7f60d48e8..61d76eb88fc 100644 --- a/man/graph.isocreate.Rd +++ b/man/graph.isocreate.Rd @@ -20,7 +20,7 @@ graph.isocreate(size, number, directed = TRUE) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_create}{\code{isoclass_create()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_create}{\code{isoclass_create}} } \keyword{internal} diff --git a/man/graph.kautz.Rd b/man/graph.kautz.Rd index 519ae844cce..1f5401cf383 100644 --- a/man/graph.kautz.Rd +++ b/man/graph.kautz.Rd @@ -18,7 +18,7 @@ graph.kautz(m, n) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_kautz}{\code{kautz()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_kautz}{\code{kautz}} } \keyword{internal} diff --git a/man/graph.knn.Rd b/man/graph.knn.Rd index 2b4a24c3631..9d524997029 100644 --- a/man/graph.knn.Rd +++ b/man/graph.knn.Rd @@ -43,7 +43,7 @@ Weights are are used to calculate a weighted degree (also called consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_avg_nearest_neighbor_degree}{\code{avg_nearest_neighbor_degree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_avg_nearest_neighbor_degree}{\code{avg_nearest_neighbor_degree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.laplacian.Rd b/man/graph.laplacian.Rd index 933197d4e2c..483e40a6c4a 100644 --- a/man/graph.laplacian.Rd +++ b/man/graph.laplacian.Rd @@ -32,7 +32,7 @@ matrix. The \code{Matrix} package is required for sparse matrices.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian}{\code{get_laplacian()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian_sparse}{\code{get_laplacian_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian}{\code{get_laplacian}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian_sparse}{\code{get_laplacian_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.lattice.Rd b/man/graph.lattice.Rd index 790d06dbdc0..2b3666182f6 100644 --- a/man/graph.lattice.Rd +++ b/man/graph.lattice.Rd @@ -45,7 +45,7 @@ be extended to boolean vector with dimvector length.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_square_lattice}{\code{square_lattice()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_square_lattice}{\code{square_lattice}} } \keyword{internal} diff --git a/man/graph.lcf.Rd b/man/graph.lcf.Rd index 009308639bc..804742c9c91 100644 --- a/man/graph.lcf.Rd +++ b/man/graph.lcf.Rd @@ -21,7 +21,7 @@ it is set to \code{len(shifts) * repeats}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lcf_vector}{\code{lcf_vector()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lcf_vector}{\code{lcf_vector}} } \keyword{internal} diff --git a/man/graph.maxflow.Rd b/man/graph.maxflow.Rd index 76ad32907b7..2ccccf6acd5 100644 --- a/man/graph.maxflow.Rd +++ b/man/graph.maxflow.Rd @@ -24,7 +24,7 @@ Note that the \code{weight} edge attribute is not used by this function.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_maxflow}{\code{maxflow()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_maxflow}{\code{maxflow}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \keyword{internal} diff --git a/man/graph.mincut.Rd b/man/graph.mincut.Rd index dfe55e7f3da..13541439cbb 100644 --- a/man/graph.mincut.Rd +++ b/man/graph.mincut.Rd @@ -33,7 +33,7 @@ partitions are also returned.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_mincut}{\code{mincut()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_mincut_value}{\code{mincut_value()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_mincut}{\code{st_mincut()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_mincut_value}{\code{st_mincut_value()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_mincut}{\code{mincut}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_mincut_value}{\code{mincut_value}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_mincut}{\code{st_mincut}}, \href{https://igraph.org/c/html/0.10.17/igraph-Flows.html#igraph_st_mincut_value}{\code{st_mincut_value}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \keyword{internal} diff --git a/man/graph.motifs.Rd b/man/graph.motifs.Rd index e6220422fba..26e9ee1b01b 100644 --- a/man/graph.motifs.Rd +++ b/man/graph.motifs.Rd @@ -24,7 +24,7 @@ If \verb{rep(0, size))}, the default, no cuts are made.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu}{\code{motifs_randesu()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_callback}{\code{motifs_randesu_callback_closure()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu}{\code{motifs_randesu}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_callback}{\code{motifs_randesu_callback_closure()}} } \keyword{internal} diff --git a/man/graph.motifs.est.Rd b/man/graph.motifs.est.Rd index 70f150e91d1..d75e379a4ac 100644 --- a/man/graph.motifs.est.Rd +++ b/man/graph.motifs.est.Rd @@ -37,7 +37,7 @@ starting point for finding motifs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_estimate}{\code{motifs_randesu_estimate()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_estimate}{\code{motifs_randesu_estimate}} } \keyword{internal} diff --git a/man/graph.motifs.no.Rd b/man/graph.motifs.no.Rd index 35d4dbd3b8c..8293f9b4ceb 100644 --- a/man/graph.motifs.no.Rd +++ b/man/graph.motifs.no.Rd @@ -23,7 +23,7 @@ If \code{NULL}, the default, no cuts are made.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_no}{\code{motifs_randesu_no()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Motifs.html#igraph_motifs_randesu_no}{\code{motifs_randesu_no}} } \keyword{internal} diff --git a/man/graph.neighborhood.Rd b/man/graph.neighborhood.Rd index 3a52ea1951c..d533ec9e1cb 100644 --- a/man/graph.neighborhood.Rd +++ b/man/graph.neighborhood.Rd @@ -37,7 +37,7 @@ argument is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/graph.ring.Rd b/man/graph.ring.Rd index 153380f6475..2c7a84f1942 100644 --- a/man/graph.ring.Rd +++ b/man/graph.ring.Rd @@ -25,7 +25,7 @@ vertex has one child.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_ring}{\code{ring()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_ring}{\code{ring}} } \keyword{internal} diff --git a/man/graph.star.Rd b/man/graph.star.Rd index 40d33ca94b6..ca2d6a55dd2 100644 --- a/man/graph.star.Rd +++ b/man/graph.star.Rd @@ -24,7 +24,7 @@ are undirected.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_star}{\code{star()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_star}{\code{star}} } \keyword{internal} diff --git a/man/graph.strength.Rd b/man/graph.strength.Rd index d4cc8e6242d..ec67e002223 100644 --- a/man/graph.strength.Rd +++ b/man/graph.strength.Rd @@ -36,7 +36,7 @@ attribute, then this is used by default. If the graph does not have a consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_strength}{\code{strength}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph.tree.Rd b/man/graph.tree.Rd index 754ef310199..a853055ffd2 100644 --- a/man/graph.tree.Rd +++ b/man/graph.tree.Rd @@ -25,7 +25,7 @@ graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_kary_tree}{\code{kary_tree()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_kary_tree}{\code{kary_tree}} } \keyword{internal} diff --git a/man/graph.union.Rd b/man/graph.union.Rd index 63d7e5f96d4..688bced241d 100644 --- a/man/graph.union.Rd +++ b/man/graph.union.Rd @@ -22,7 +22,7 @@ graphs are named.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph_.Rd b/man/graph_.Rd index 91136d98fc5..07b0c5a3028 100644 --- a/man/graph_.Rd +++ b/man/graph_.Rd @@ -16,7 +16,7 @@ This is a generic function to convert R objects to igraph graphs. TODO } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_center.Rd b/man/graph_center.Rd index 811691bdb93..75f9ac8c1bf 100644 --- a/man/graph_center.Rd +++ b/man/graph_center.Rd @@ -33,7 +33,7 @@ The vertex IDs of the central vertices. The center of a graph is the set of its vertices with minimal eccentricity. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_graph_center_dijkstra}{\code{graph_center_dijkstra()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_graph_center_dijkstra}{\code{graph_center_dijkstra}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_from_adj_list.Rd b/man/graph_from_adj_list.Rd index 50799d87960..293d3315546 100644 --- a/man/graph_from_adj_list.Rd +++ b/man/graph_from_adj_list.Rd @@ -45,7 +45,7 @@ The idea is that you convert your graph to an adjacency list by create again an igraph graph by calling \code{graph_from_adj_list()}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist}} } \examples{ diff --git a/man/graph_from_adjacency_matrix.Rd b/man/graph_from_adjacency_matrix.Rd index 44138010bfb..9b1c3d543c4 100644 --- a/man/graph_from_adjacency_matrix.Rd +++ b/man/graph_from_adjacency_matrix.Rd @@ -141,7 +141,7 @@ gives the edge weights. } } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjacency}{\code{adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_weighted_adjacency}{\code{weighted_adjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjacency}{\code{adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_weighted_adjacency}{\code{weighted_adjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_from_atlas.Rd b/man/graph_from_atlas.Rd index b0da21ad9a0..a193e0a1a46 100644 --- a/man/graph_from_atlas.Rd +++ b/man/graph_from_atlas.Rd @@ -32,7 +32,7 @@ automorphisms. } } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_atlas}{\code{atlas()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_atlas}{\code{atlas}} } \examples{ diff --git a/man/graph_from_biadjacency_matrix.Rd b/man/graph_from_biadjacency_matrix.Rd index 03bdb69fc30..33176fb1a82 100644 --- a/man/graph_from_biadjacency_matrix.Rd +++ b/man/graph_from_biadjacency_matrix.Rd @@ -72,7 +72,7 @@ Some authors refer to the bipartite adjacency matrix as the this naming to avoid confusion with the edge-vertex incidence matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_from_data_frame.Rd b/man/graph_from_data_frame.Rd index a2ba4f92877..de434a60caf 100644 --- a/man/graph_from_data_frame.Rd +++ b/man/graph_from_data_frame.Rd @@ -95,7 +95,7 @@ touched. In other words, vertex names (=the first column) cannot be \code{NA}, but other vertex attributes can. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_add_vertices}{\code{add_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_from_edgelist.Rd b/man/graph_from_edgelist.Rd index d51df54d96c..97e584ef676 100644 --- a/man/graph_from_edgelist.Rd +++ b/man/graph_from_edgelist.Rd @@ -28,7 +28,7 @@ names and a vertex id will be assigned to each name, and also a \code{name} vertex attribute will be added. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}} } \examples{ diff --git a/man/graph_from_graphdb.Rd b/man/graph_from_graphdb.Rd index da8579f9d11..6284740bc45 100644 --- a/man/graph_from_graphdb.Rd +++ b/man/graph_from_graphdb.Rd @@ -72,7 +72,7 @@ its old version at for the actual format of a graph database file and other information. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_read_graph_graphdb}{\code{read_graph_graphdb()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Foreign.html#igraph_read_graph_graphdb}{\code{read_graph_graphdb}} } \references{ diff --git a/man/graph_from_graphnel.Rd b/man/graph_from_graphnel.Rd index b61aaf7f6fb..0cd589a8c4d 100644 --- a/man/graph_from_graphnel.Rd +++ b/man/graph_from_graphnel.Rd @@ -39,7 +39,7 @@ attributes of the multiple edges are lost: they are all replaced by the attributes of the first of the multiple edges. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/graph_from_incidence_matrix.Rd b/man/graph_from_incidence_matrix.Rd index cc40a0d7df5..d2c7a243da4 100644 --- a/man/graph_from_incidence_matrix.Rd +++ b/man/graph_from_incidence_matrix.Rd @@ -18,7 +18,7 @@ Some authors refer to the bipartite adjacency matrix as the this naming to avoid confusion with the edge-vertex incidence matrix. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_biadjacency}{\code{biadjacency}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graph_from_isomorphism_class.Rd b/man/graph_from_isomorphism_class.Rd index 1f072e599c0..cbbe7527fb7 100644 --- a/man/graph_from_isomorphism_class.Rd +++ b/man/graph_from_isomorphism_class.Rd @@ -25,7 +25,7 @@ isomorphism class. Currently it can handle directed graphs with 3 or 4 vertices and undirected graphd with 3 to 6 vertices. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_create}{\code{isoclass_create()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_create}{\code{isoclass_create}} } \seealso{ diff --git a/man/graph_from_lcf.Rd b/man/graph_from_lcf.Rd index 94fd3d0e74a..72cbaf4ac44 100644 --- a/man/graph_from_lcf.Rd +++ b/man/graph_from_lcf.Rd @@ -28,7 +28,7 @@ be performed. See \url{https://mathworld.wolfram.com/LCFNotation.html} for details. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lcf_vector}{\code{lcf_vector()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lcf_vector}{\code{lcf_vector}} } \examples{ diff --git a/man/graph_from_literal.Rd b/man/graph_from_literal.Rd index a9efc4fd688..d02eb458fe0 100644 --- a/man/graph_from_literal.Rd +++ b/man/graph_from_literal.Rd @@ -92,7 +92,7 @@ You can include any character in the vertex names this way, even See more examples below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_create}{\code{create}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_famous}{\code{famous}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}} } \examples{ diff --git a/man/graphlet_basis.Rd b/man/graphlet_basis.Rd index 27ad65fc01b..5397bf9df8e 100644 --- a/man/graphlet_basis.Rd +++ b/man/graphlet_basis.Rd @@ -76,7 +76,7 @@ the algorithm, and they are useful if the user wishes to perform them individually: \code{graphlet_basis()} and \code{graphlet_proj()}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_candidate_basis}{\code{graphlets_candidate_basis()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_project}{\code{graphlets_project()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets}{\code{graphlets()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_candidate_basis}{\code{graphlets_candidate_basis}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_project}{\code{graphlets_project}}, \href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets}{\code{graphlets}} } \examples{ diff --git a/man/graphlets.candidate.basis.Rd b/man/graphlets.candidate.basis.Rd index b72de6dc592..a162708f8d5 100644 --- a/man/graphlets.candidate.basis.Rd +++ b/man/graphlets.candidate.basis.Rd @@ -21,7 +21,7 @@ attribute is used.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_candidate_basis}{\code{graphlets_candidate_basis()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_candidate_basis}{\code{graphlets_candidate_basis}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/graphlets.project.Rd b/man/graphlets.project.Rd index ddedfe4af57..f3154d7df1a 100644 --- a/man/graphlets.project.Rd +++ b/man/graphlets.project.Rd @@ -34,7 +34,7 @@ projection.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_project}{\code{graphlets_project()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Graphlets.html#igraph_graphlets_project}{\code{graphlets_project}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/greedy_vertex_coloring.Rd b/man/greedy_vertex_coloring.Rd index 767ec078d27..5dc46267139 100644 --- a/man/greedy_vertex_coloring.Rd +++ b/man/greedy_vertex_coloring.Rd @@ -34,7 +34,7 @@ obtained this way is not necessarily minimum but it can be calculated in linear time. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Coloring.html#igraph_vertex_coloring_greedy}{\code{vertex_coloring_greedy()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Coloring.html#igraph_vertex_coloring_greedy}{\code{vertex_coloring_greedy}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/grg.game.Rd b/man/grg.game.Rd index bb1f0e76d49..1ceb791d1c4 100644 --- a/man/grg.game.Rd +++ b/man/grg.game.Rd @@ -24,7 +24,7 @@ as vertex attributes called \sQuote{\code{x}} and \sQuote{\code{y}}.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/growing.random.game.Rd b/man/growing.random.game.Rd index 1f10b90f700..cfa4de23d25 100644 --- a/man/growing.random.game.Rd +++ b/man/growing.random.game.Rd @@ -23,7 +23,7 @@ each time step the added edges are originating from the new vertex.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_growing_random_game}{\code{growing_random_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_growing_random_game}{\code{growing_random_game}} } \keyword{internal} diff --git a/man/gsize.Rd b/man/gsize.Rd index 788c7f2f2ab..740ca8df015 100644 --- a/man/gsize.Rd +++ b/man/gsize.Rd @@ -19,7 +19,7 @@ Numeric scalar, the number of edges. \code{ecount()} and \code{gsize()} are aliases. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/handle_vertex_type_arg.Rd b/man/handle_vertex_type_arg.Rd index 2dd4a885078..59f7c73a596 100644 --- a/man/handle_vertex_type_arg.Rd +++ b/man/handle_vertex_type_arg.Rd @@ -28,7 +28,7 @@ vertex types. Non-logical vertex type vectors are coerced into logical vectors after printing a warning. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \author{ diff --git a/man/harmonic_centrality.Rd b/man/harmonic_centrality.Rd index 4d22bbe160d..04f5ac60980 100644 --- a/man/harmonic_centrality.Rd +++ b/man/harmonic_centrality.Rd @@ -53,7 +53,7 @@ to speed up the calculation. If \code{cutoff} is negative (which is the default), then the function calculates the exact harmonic centrality scores. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_harmonic_centrality_cutoff}{\code{harmonic_centrality_cutoff()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_harmonic_centrality_cutoff}{\code{harmonic_centrality_cutoff}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/has.multiple.Rd b/man/has.multiple.Rd index 318966fa07e..b2faacc86d9 100644 --- a/man/has.multiple.Rd +++ b/man/has.multiple.Rd @@ -16,7 +16,7 @@ has.multiple(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple}} } \keyword{internal} diff --git a/man/has_eulerian_path.Rd b/man/has_eulerian_path.Rd index 816d3b92e97..f21107e1ffe 100644 --- a/man/has_eulerian_path.Rd +++ b/man/has_eulerian_path.Rd @@ -52,7 +52,7 @@ a result. \code{eulerian_cycle()} returns a possible Eulerian cycle, described with its edge and vertex sequence, or throws an error if no such cycle exists. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_is_eulerian}{\code{is_eulerian()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_eulerian_path}{\code{eulerian_path()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_eulerian_cycle}{\code{eulerian_cycle()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_is_eulerian}{\code{is_eulerian}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_eulerian_path}{\code{eulerian_path}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_eulerian_cycle}{\code{eulerian_cycle}} } \examples{ diff --git a/man/head_of.Rd b/man/head_of.Rd index 034d42873a1..a122faf0fb3 100644 --- a/man/head_of.Rd +++ b/man/head_of.Rd @@ -20,7 +20,7 @@ For undirected graphs, head and tail is not defined. In this case \code{tail_of()} returns the other end(s) of the edge(s). } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \seealso{ diff --git a/man/hits_scores.Rd b/man/hits_scores.Rd index d79bed8177c..d042451c764 100644 --- a/man/hits_scores.Rd +++ b/man/hits_scores.Rd @@ -61,7 +61,7 @@ For undirected matrices the adjacency matrix is symmetric and the hub scores are the same as authority scores. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/hrg.Rd b/man/hrg.Rd index 83a6541de5e..0b88a3a995a 100644 --- a/man/hrg.Rd +++ b/man/hrg.Rd @@ -22,7 +22,7 @@ vertices. The \code{prob} argument contains the HRG probability labels for each vertex; these are ignored for leaf vertices. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_create}{\code{hrg_create()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_create}{\code{hrg_create}} } \seealso{ diff --git a/man/hrg.consensus.Rd b/man/hrg.consensus.Rd index 1b38683cbc5..79927259d4c 100644 --- a/man/hrg.consensus.Rd +++ b/man/hrg.consensus.Rd @@ -27,7 +27,7 @@ missing edge prediction.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_consensus}{\code{hrg_consensus()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_consensus}{\code{hrg_consensus}} } \keyword{internal} diff --git a/man/hrg.create.Rd b/man/hrg.create.Rd index f94ce67eecc..10c7a685820 100644 --- a/man/hrg.create.Rd +++ b/man/hrg.create.Rd @@ -19,7 +19,7 @@ vertex ids.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_create}{\code{hrg_create()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_create}{\code{hrg_create}} } \keyword{internal} diff --git a/man/hrg.dendrogram.Rd b/man/hrg.dendrogram.Rd index 75c18c76c22..ace3a136f17 100644 --- a/man/hrg.dendrogram.Rd +++ b/man/hrg.dendrogram.Rd @@ -16,7 +16,7 @@ hrg.dendrogram(hrg) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_from_hrg_dendrogram}{\code{from_hrg_dendrogram()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_from_hrg_dendrogram}{\code{from_hrg_dendrogram}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/hrg.fit.Rd b/man/hrg.fit.Rd index 688a2628ce9..09557d4f691 100644 --- a/man/hrg.fit.Rd +++ b/man/hrg.fit.Rd @@ -27,7 +27,7 @@ MCMC procedure is performed until convergence.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_fit}{\code{hrg_fit()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_fit}{\code{hrg_fit}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/hrg.game.Rd b/man/hrg.game.Rd index c2c70f5960a..8da697ba84a 100644 --- a/man/hrg.game.Rd +++ b/man/hrg.game.Rd @@ -16,7 +16,7 @@ hrg.game(hrg) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_game}{\code{hrg_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_game}{\code{hrg_game}} } \keyword{internal} diff --git a/man/hrg.predict.Rd b/man/hrg.predict.Rd index 6ec3fdb1dc9..ce2091d5b4c 100644 --- a/man/hrg.predict.Rd +++ b/man/hrg.predict.Rd @@ -37,7 +37,7 @@ number for a more accurate prediction.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_predict}{\code{hrg_predict()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_hrg_predict}{\code{hrg_predict}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/hrg_tree.Rd b/man/hrg_tree.Rd index 2404b4982bf..fe8272e6616 100644 --- a/man/hrg_tree.Rd +++ b/man/hrg_tree.Rd @@ -17,7 +17,7 @@ An igraph graph with a vertex attribute called \code{"probability"}. random graph model. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_from_hrg_dendrogram}{\code{from_hrg_dendrogram()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-HRG.html#igraph_from_hrg_dendrogram}{\code{from_hrg_dendrogram}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \seealso{ diff --git a/man/hub.score.Rd b/man/hub.score.Rd index b95ec832ae2..f1424f40b3f 100644 --- a/man/hub.score.Rd +++ b/man/hub.score.Rd @@ -30,7 +30,7 @@ selected by the surfer.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/hub_score.Rd b/man/hub_score.Rd index 7fa27ff88e2..aee91cab229 100644 --- a/man/hub_score.Rd +++ b/man/hub_score.Rd @@ -37,7 +37,7 @@ Kleinberg's authority centrality scores. Kleinberg's hub centrality scores. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_hub_and_authority_scores}{\code{hub_and_authority_scores}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \seealso{ diff --git a/man/igraph.from.graphNEL.Rd b/man/igraph.from.graphNEL.Rd index d60e9cc6e32..5ab7dab9ee7 100644 --- a/man/igraph.from.graphNEL.Rd +++ b/man/igraph.from.graphNEL.Rd @@ -28,7 +28,7 @@ whenever possible, before adding them to the igraph graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_adjlist}{\code{adjlist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/igraph.sample.Rd b/man/igraph.sample.Rd index 11dbb5cb1c3..62762fe58e2 100644 --- a/man/igraph.sample.Rd +++ b/man/igraph.sample.Rd @@ -20,7 +20,7 @@ igraph.sample(low, high, length) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_random_sample}{\code{random_sample()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_random_sample}{\code{random_sample}} } \keyword{internal} diff --git a/man/igraph.to.graphNEL.Rd b/man/igraph.to.graphNEL.Rd index 6ed6c0a0347..3e5f1725659 100644 --- a/man/igraph.to.graphNEL.Rd +++ b/man/igraph.to.graphNEL.Rd @@ -16,7 +16,7 @@ igraph.to.graphNEL(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_has_multiple}{\code{has_multiple}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/igraph.version.Rd b/man/igraph.version.Rd index ddd5bcd1b09..80666c00d4b 100644 --- a/man/igraph.version.Rd +++ b/man/igraph.version.Rd @@ -13,7 +13,7 @@ igraph.version() consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_version}{\code{version()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_version}{\code{version}} } \keyword{internal} diff --git a/man/igraph_version.Rd b/man/igraph_version.Rd index cf8ed8559aa..f67ebca093e 100644 --- a/man/igraph_version.Rd +++ b/man/igraph_version.Rd @@ -15,7 +15,7 @@ Returns the R package version, prints the R package version and C library version. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_version}{\code{version()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Nongraph.html#igraph_version}{\code{version}} } \examples{ diff --git a/man/incident.Rd b/man/incident.Rd index 70847942dac..d357cbe25dc 100644 --- a/man/incident.Rd +++ b/man/incident.Rd @@ -23,7 +23,7 @@ the input vertex. Incident edges of a vertex in a graph } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_incident}{\code{incident()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_incident}{\code{incident}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}} } \examples{ diff --git a/man/incident_edges.Rd b/man/incident_edges.Rd index 8743233333f..17e2e189f33 100644 --- a/man/incident_edges.Rd +++ b/man/incident_edges.Rd @@ -23,7 +23,7 @@ This function is similar to \code{\link[=incident]{incident()}}, but it queries multiple vertices at once. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/independence.number.Rd b/man/independence.number.Rd index 2fe69fcef73..630708f31b2 100644 --- a/man/independence.number.Rd +++ b/man/independence.number.Rd @@ -16,7 +16,7 @@ independence.number(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_independence_number}{\code{independence_number()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_independence_number}{\code{independence_number}} } \keyword{internal} diff --git a/man/independent.vertex.sets.Rd b/man/independent.vertex.sets.Rd index 742b5d11683..25f2b0d202e 100644 --- a/man/independent.vertex.sets.Rd +++ b/man/independent.vertex.sets.Rd @@ -22,7 +22,7 @@ vertex sets to find. \code{NULL} means no limit.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/induced.subgraph.Rd b/man/induced.subgraph.Rd index 78e14f9f85c..159742a9ebc 100644 --- a/man/induced.subgraph.Rd +++ b/man/induced.subgraph.Rd @@ -32,7 +32,7 @@ result graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/infomap.community.Rd b/man/infomap.community.Rd index ab495bde6d1..c9594c11d84 100644 --- a/man/infomap.community.Rd +++ b/man/infomap.community.Rd @@ -41,7 +41,7 @@ of the detected community structure.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_infomap}{\code{community_infomap()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_infomap}{\code{community_infomap}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/inside-square-error.Rd b/man/inside-square-error.Rd index eadd774876c..9c0e8444480 100644 --- a/man/inside-square-error.Rd +++ b/man/inside-square-error.Rd @@ -34,7 +34,7 @@ Functions to be used only with \verb{[.igraph.es} and \verb{[.igraph.vs} See \code{\link[igraph]{[.igraph.vs}} and \code{\link[igraph]{[.igraph.es}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/interconnected.islands.game.Rd b/man/interconnected.islands.game.Rd index 77498be227a..0b637b3dab2 100644 --- a/man/interconnected.islands.game.Rd +++ b/man/interconnected.islands.game.Rd @@ -23,7 +23,7 @@ island.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_simple_interconnected_islands_game}{\code{simple_interconnected_islands_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_simple_interconnected_islands_game}{\code{simple_interconnected_islands_game}} } \keyword{internal} diff --git a/man/intersection.igraph.Rd b/man/intersection.igraph.Rd index 6de4ea851cc..4e088e4dd2f 100644 --- a/man/intersection.igraph.Rd +++ b/man/intersection.igraph.Rd @@ -48,7 +48,7 @@ An error is generated if some input graphs are directed and others are undirected. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_permute_vertices}{\code{permute_vertices}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/invalidate_cache.Rd b/man/invalidate_cache.Rd index 23a368a6bd4..8aa27472a5c 100644 --- a/man/invalidate_cache.Rd +++ b/man/invalidate_cache.Rd @@ -27,7 +27,7 @@ invalid cache entry is when the result of a cached function (such as this function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_invalidate_cache}{\code{invalidate_cache()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_invalidate_cache}{\code{invalidate_cache}} } \examples{ diff --git a/man/is.connected.Rd b/man/is.connected.Rd index 3450acb5dbb..69da64751ff 100644 --- a/man/is.connected.Rd +++ b/man/is.connected.Rd @@ -20,7 +20,7 @@ connected components to search. It is ignored for undirected graphs.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_connected}{\code{is_connected()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_connected}{\code{is_connected}} } \keyword{internal} diff --git a/man/is.dag.Rd b/man/is.dag.Rd index 9d93f1bf013..aa2f76ea770 100644 --- a/man/is.dag.Rd +++ b/man/is.dag.Rd @@ -17,7 +17,7 @@ is.dag(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_dag}{\code{is_dag()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_dag}{\code{is_dag}} } \keyword{internal} diff --git a/man/is.degree.sequence.Rd b/man/is.degree.sequence.Rd index 2d240fcdc0e..fde63eb66d3 100644 --- a/man/is.degree.sequence.Rd +++ b/man/is.degree.sequence.Rd @@ -20,7 +20,7 @@ should be \code{NULL}. For directed graphs it specifies the in-degrees.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical}} } \keyword{internal} diff --git a/man/is.directed.Rd b/man/is.directed.Rd index f33093a86e3..d92e2a02373 100644 --- a/man/is.directed.Rd +++ b/man/is.directed.Rd @@ -16,7 +16,7 @@ is.directed(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}} } \keyword{internal} diff --git a/man/is.graphical.degree.sequence.Rd b/man/is.graphical.degree.sequence.Rd index 99f3a6dc875..92ac7ed1943 100644 --- a/man/is.graphical.degree.sequence.Rd +++ b/man/is.graphical.degree.sequence.Rd @@ -31,7 +31,7 @@ allowed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical}} } \keyword{internal} diff --git a/man/is.loop.Rd b/man/is.loop.Rd index afbc31e9cc2..b5f3326d910 100644 --- a/man/is.loop.Rd +++ b/man/is.loop.Rd @@ -19,7 +19,7 @@ all edges in the graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_loop}{\code{is_loop()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_loop}{\code{is_loop}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/is.matching.Rd b/man/is.matching.Rd index 56ac7bbb9f8..8f480468457 100644 --- a/man/is.matching.Rd +++ b/man/is.matching.Rd @@ -24,7 +24,7 @@ are taken from the \sQuote{\code{type}} vertex attribute, if present.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_matching}{\code{is_matching()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_matching}{\code{is_matching}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/is.maximal.matching.Rd b/man/is.maximal.matching.Rd index f798591241c..2dcea519899 100644 --- a/man/is.maximal.matching.Rd +++ b/man/is.maximal.matching.Rd @@ -24,7 +24,7 @@ are taken from the \sQuote{\code{type}} vertex attribute, if present.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_maximal_matching}{\code{is_maximal_matching()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_maximal_matching}{\code{is_maximal_matching}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/is.minimal.separator.Rd b/man/is.minimal.separator.Rd index 4a908c16420..a0c1c0db17e 100644 --- a/man/is.minimal.separator.Rd +++ b/man/is.minimal.separator.Rd @@ -20,7 +20,7 @@ separator.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_minimal_separator}{\code{is_minimal_separator()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_minimal_separator}{\code{is_minimal_separator}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/is.multiple.Rd b/man/is.multiple.Rd index 267db47fedc..1bba76f3404 100644 --- a/man/is.multiple.Rd +++ b/man/is.multiple.Rd @@ -19,7 +19,7 @@ all edges in the graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_multiple}{\code{is_multiple()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_multiple}{\code{is_multiple}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/is.mutual.Rd b/man/is.mutual.Rd index 9ac882179fb..d3b90bdb533 100644 --- a/man/is.mutual.Rd +++ b/man/is.mutual.Rd @@ -21,7 +21,7 @@ includes all edges in the order of their ids.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_mutual}{\code{is_mutual()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_mutual}{\code{is_mutual}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/is.separator.Rd b/man/is.separator.Rd index e648783c03b..bcad7249876 100644 --- a/man/is.separator.Rd +++ b/man/is.separator.Rd @@ -20,7 +20,7 @@ separator.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_separator}{\code{is_separator()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_separator}{\code{is_separator}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/is.simple.Rd b/man/is.simple.Rd index 5bd42e09c41..12ae05e68aa 100644 --- a/man/is.simple.Rd +++ b/man/is.simple.Rd @@ -16,7 +16,7 @@ is.simple(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_simple}{\code{is_simple()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_simple}{\code{is_simple}} } \keyword{internal} diff --git a/man/is_acyclic.Rd b/man/is_acyclic.Rd index 3047826947f..04d2e169e95 100644 --- a/man/is_acyclic.Rd +++ b/man/is_acyclic.Rd @@ -20,7 +20,7 @@ This function looks for directed cycles in directed graphs and undirected cycles in undirected graphs. Use \code{\link[=find_cycle]{find_cycle()}} to return a specific cycle. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_is_acyclic}{\code{is_acyclic()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cycles.html#igraph_is_acyclic}{\code{is_acyclic}} } \examples{ diff --git a/man/is_biconnected.Rd b/man/is_biconnected.Rd index c4d204d9272..17666b9c7f8 100644 --- a/man/is_biconnected.Rd +++ b/man/is_biconnected.Rd @@ -27,7 +27,7 @@ Note that some authors do not consider the graph consisting of two connected vertices as biconnected, however, igraph does. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_biconnected}{\code{is_biconnected()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_biconnected}{\code{is_biconnected}} } \examples{ diff --git a/man/is_complete.Rd b/man/is_complete.Rd index d88087d181c..9fcd4565022 100644 --- a/man/is_complete.Rd +++ b/man/is_complete.Rd @@ -18,7 +18,7 @@ directed pairs of vertices. igraph considers both the singleton graph and the null graph complete. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_complete}{\code{is_complete()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_complete}{\code{is_complete}} } \examples{ diff --git a/man/is_dag.Rd b/man/is_dag.Rd index 29586af7b7a..cfa0bc79491 100644 --- a/man/is_dag.Rd +++ b/man/is_dag.Rd @@ -22,7 +22,7 @@ graph. the graph is a DAG. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_dag}{\code{is_dag()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_dag}{\code{is_dag}} } \examples{ diff --git a/man/is_degseq.Rd b/man/is_degseq.Rd index 2ec9c9d028b..b1ac7d12241 100644 --- a/man/is_degseq.Rd +++ b/man/is_degseq.Rd @@ -26,7 +26,7 @@ degree vectors are equal and whether their sums are also equal. These are known sufficient and necessary conditions for a degree sequence to be valid. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical}} } \examples{ diff --git a/man/is_directed.Rd b/man/is_directed.Rd index 023bcdc1ad5..b1ee8a5093d 100644 --- a/man/is_directed.Rd +++ b/man/is_directed.Rd @@ -16,7 +16,7 @@ Logical scalar, whether the graph is directed. Check whether a graph is directed } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}} } \examples{ diff --git a/man/is_forest.Rd b/man/is_forest.Rd index f61f1f52aeb..b7afc98fb23 100644 --- a/man/is_forest.Rd +++ b/man/is_forest.Rd @@ -45,7 +45,7 @@ By convention, the null graph (i.e. the graph with no vertices) is considered to be a forest. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/is_graphical.Rd b/man/is_graphical.Rd index 180f2abf2f7..bc69820fb6d 100644 --- a/man/is_graphical.Rd +++ b/man/is_graphical.Rd @@ -37,7 +37,7 @@ can perform the check also when self-loops, multi-edges, or both are allowed in the graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_graphical}{\code{is_graphical}} } \examples{ diff --git a/man/is_min_separator.Rd b/man/is_min_separator.Rd index 9dc9d42d758..cb39bd6e0f7 100644 --- a/man/is_min_separator.Rd +++ b/man/is_min_separator.Rd @@ -26,7 +26,7 @@ vertex separator. A minimal vertex separator is a vertex separator, such that none of its proper subsets are a vertex separator. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_minimal_separator}{\code{is_minimal_separator()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_minimal_separator}{\code{is_minimal_separator}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/is_separator.Rd b/man/is_separator.Rd index 4e5f7d08894..598fb6b9fc5 100644 --- a/man/is_separator.Rd +++ b/man/is_separator.Rd @@ -26,7 +26,7 @@ in the graph such that all paths between \eqn{u} and \eqn{v} pass through some vertices in \eqn{S}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_separator}{\code{is_separator()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Separators.html#igraph_is_separator}{\code{is_separator}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/is_tree.Rd b/man/is_tree.Rd index eb0f4655cdb..7ea2baf0e5c 100644 --- a/man/is_tree.Rd +++ b/man/is_tree.Rd @@ -45,7 +45,7 @@ By convention, the null graph (i.e. the graph with no vertices) is considered not to be a tree. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_tree}{\code{is_tree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_tree}{\code{is_tree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/isomorphic.Rd b/man/isomorphic.Rd index 0f24f9f2739..880ab90fbfb 100644 --- a/man/isomorphic.Rd +++ b/man/isomorphic.Rd @@ -94,7 +94,7 @@ Character constant, the heuristics to use in the BLISS algorithm for \code{graph } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic}{\code{isomorphic()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic_bliss}{\code{isomorphic_bliss()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic_vf2}{\code{isomorphic_vf2()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic}{\code{isomorphic}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic_bliss}{\code{isomorphic_bliss}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isomorphic_vf2}{\code{isomorphic_vf2}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/isomorphism_class.Rd b/man/isomorphism_class.Rd index 4c2d40d4973..d9880a4e2e9 100644 --- a/man/isomorphism_class.Rd +++ b/man/isomorphism_class.Rd @@ -25,7 +25,7 @@ isomorphism class. Currently it can handle directed graphs with 3 or 4 vertices and undirected graphs with 3 to 6 vertices. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_subgraph}{\code{isoclass_subgraph()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass}{\code{isoclass()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass_subgraph}{\code{isoclass_subgraph}}, \href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_isoclass}{\code{isoclass}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/isomorphisms.Rd b/man/isomorphisms.Rd index 797cf898034..2c4c3188400 100644 --- a/man/isomorphisms.Rd +++ b/man/isomorphisms.Rd @@ -40,7 +40,7 @@ returns \code{NULL} invisibly. Calculate all isomorphic mappings between the vertices of two graphs } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_get_isomorphisms_vf2}{\code{get_isomorphisms_vf2()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Isomorphism.html#igraph_get_isomorphisms_vf2}{\code{get_isomorphisms_vf2}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \seealso{ diff --git a/man/ivs.Rd b/man/ivs.Rd index 36134a508e6..b010352277a 100644 --- a/man/ivs.Rd +++ b/man/ivs.Rd @@ -73,7 +73,7 @@ reference below. \code{is_ivs()} tests if no pairs within a vertex set are connected. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_independent_vertex_sets}{\code{largest_independent_vertex_sets()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_maximal_independent_vertex_sets}{\code{maximal_independent_vertex_sets()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_independence_number}{\code{independence_number()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_independent_vertex_set}{\code{is_independent_vertex_set()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_independent_vertex_sets}{\code{largest_independent_vertex_sets}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_maximal_independent_vertex_sets}{\code{maximal_independent_vertex_sets}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_independence_number}{\code{independence_number}}, \href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_is_independent_vertex_set}{\code{is_independent_vertex_set}} } \examples{ diff --git a/man/k.regular.game.Rd b/man/k.regular.game.Rd index d814216743c..28bcdf0aee6 100644 --- a/man/k.regular.game.Rd +++ b/man/k.regular.game.Rd @@ -24,7 +24,7 @@ out-degree and in-degree in a directed graph.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_k_regular_game}{\code{k_regular_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_k_regular_game}{\code{k_regular_game}} } \keyword{internal} diff --git a/man/k_shortest_paths.Rd b/man/k_shortest_paths.Rd index ba84b3b8d62..99f0877ef26 100644 --- a/man/k_shortest_paths.Rd +++ b/man/k_shortest_paths.Rd @@ -56,7 +56,7 @@ vertex in order of increasing length. Currently this function uses Yen's algorithm. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_k_shortest_paths}{\code{get_k_shortest_paths()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_k_shortest_paths}{\code{get_k_shortest_paths}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \references{ diff --git a/man/knn.Rd b/man/knn.Rd index 1edee8f85f5..fe6b38de6b9 100644 --- a/man/knn.Rd +++ b/man/knn.Rd @@ -68,7 +68,7 @@ as indicated by \code{mode}. \eqn{w_{uv}}{w_uv} denotes the weighted adjacency m and \eqn{k_v}{k_v} is the neighbors' degree, specified by \code{neighbor_degree_mode}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_avg_nearest_neighbor_degree}{\code{avg_nearest_neighbor_degree()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_avg_nearest_neighbor_degree}{\code{avg_nearest_neighbor_degree}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/label.propagation.community.Rd b/man/label.propagation.community.Rd index f1c9f64e7d6..6cfeb5e1d4b 100644 --- a/man/label.propagation.community.Rd +++ b/man/label.propagation.community.Rd @@ -51,7 +51,7 @@ will be ignored. Also note that vertices without labels cannot be fixed.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_label_propagation}{\code{community_label_propagation()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Community.html#igraph_community_label_propagation}{\code{community_label_propagation}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/laplacian_matrix.Rd b/man/laplacian_matrix.Rd index 3b78256487e..0f0bff0cb1f 100644 --- a/man/laplacian_matrix.Rd +++ b/man/laplacian_matrix.Rd @@ -66,7 +66,7 @@ The Laplacian matrix \eqn{L} is defined in terms of the adjacency matrix } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian}{\code{get_laplacian()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian_sparse}{\code{get_laplacian_sparse()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian}{\code{get_laplacian}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_laplacian_sparse}{\code{get_laplacian_sparse}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/largest.cliques.Rd b/man/largest.cliques.Rd index bd5f6f9644c..bc60ba7d5b5 100644 --- a/man/largest.cliques.Rd +++ b/man/largest.cliques.Rd @@ -16,7 +16,7 @@ largest.cliques(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_cliques}{\code{largest_cliques()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_cliques}{\code{largest_cliques}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/largest.independent.vertex.sets.Rd b/man/largest.independent.vertex.sets.Rd index 8287b1a7dbb..bb5faebbc5e 100644 --- a/man/largest.independent.vertex.sets.Rd +++ b/man/largest.independent.vertex.sets.Rd @@ -16,7 +16,7 @@ largest.independent.vertex.sets(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_independent_vertex_sets}{\code{largest_independent_vertex_sets()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Cliques.html#igraph_largest_independent_vertex_sets}{\code{largest_independent_vertex_sets}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/lastcit.game.Rd b/man/lastcit.game.Rd index af171384131..e36accdb5f8 100644 --- a/man/lastcit.game.Rd +++ b/man/lastcit.game.Rd @@ -32,7 +32,7 @@ probabilities for the different vertex types.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lastcit_game}{\code{lastcit_game()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_lastcit_game}{\code{lastcit_game}} } \keyword{internal} diff --git a/man/layout.auto.Rd b/man/layout.auto.Rd index ff8c13953de..2bb5d5b7ae4 100644 --- a/man/layout.auto.Rd +++ b/man/layout.auto.Rd @@ -22,7 +22,7 @@ the real layout function. For \code{nicely()} all argument are passed to consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout.bipartite.Rd b/man/layout.bipartite.Rd index a1d9c50972e..409a34dc18d 100644 --- a/man/layout.bipartite.Rd +++ b/man/layout.bipartite.Rd @@ -31,7 +31,7 @@ you have too many edge crossings, increase this.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_bipartite}{\code{layout_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_bipartite}{\code{layout_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \keyword{internal} diff --git a/man/layout.davidson.harel.Rd b/man/layout.davidson.harel.Rd index 28416461c12..566d202c1b3 100644 --- a/man/layout.davidson.harel.Rd +++ b/man/layout.davidson.harel.Rd @@ -53,7 +53,7 @@ the energy function.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_davidson_harel}{\code{layout_davidson_harel()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_davidson_harel}{\code{layout_davidson_harel}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density}} } \keyword{internal} diff --git a/man/layout.drl.Rd b/man/layout.drl.Rd index 5a235fd94e0..f1e8ac163ab 100644 --- a/man/layout.drl.Rd +++ b/man/layout.drl.Rd @@ -45,7 +45,7 @@ significantly longer to compute.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout.fruchterman.reingold.grid.Rd b/man/layout.fruchterman.reingold.grid.Rd index c9bd2d65c89..67ff048132e 100644 --- a/man/layout.fruchterman.reingold.grid.Rd +++ b/man/layout.fruchterman.reingold.grid.Rd @@ -20,7 +20,7 @@ Layout coordinates, a two column matrix. Now it calls the Fruchterman-Reingold layout \code{\link[=layout_with_fr]{layout_with_fr()}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout.gem.Rd b/man/layout.gem.Rd index 56e0bd64b58..5c01ebb365b 100644 --- a/man/layout.gem.Rd +++ b/man/layout.gem.Rd @@ -42,7 +42,7 @@ default is the square root of the number of vertices.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_gem}{\code{layout_gem()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_gem}{\code{layout_gem}} } \keyword{internal} diff --git a/man/layout.grid.Rd b/man/layout.grid.Rd index 8982c9a8241..fecf358ab45 100644 --- a/man/layout.grid.Rd +++ b/man/layout.grid.Rd @@ -27,7 +27,7 @@ determinted automatically.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid}{\code{layout_grid()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid_3d}{\code{layout_grid_3d()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid}{\code{layout_grid}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid_3d}{\code{layout_grid_3d}} } \keyword{internal} diff --git a/man/layout.mds.Rd b/man/layout.mds.Rd index e147b15695a..11b86842d1d 100644 --- a/man/layout.mds.Rd +++ b/man/layout.mds.Rd @@ -27,7 +27,7 @@ solving the eigenproblem} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_mds}{\code{layout_mds()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_mds}{\code{layout_mds}} } \keyword{internal} diff --git a/man/layout.spring.Rd b/man/layout.spring.Rd index b876cffadcd..71e8dc6579c 100644 --- a/man/layout.spring.Rd +++ b/man/layout.spring.Rd @@ -20,7 +20,7 @@ Layout coordinates, a two column matrix. Now it calls the Fruchterman-Reingold layout \code{\link[=layout_with_fr]{layout_with_fr()}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout.star.Rd b/man/layout.star.Rd index 30fb682726b..126e7eeb00f 100644 --- a/man/layout.star.Rd +++ b/man/layout.star.Rd @@ -22,7 +22,7 @@ The default ordering is given by the vertex ids.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_star}{\code{layout_star()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_star}{\code{layout_star}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle}} } \keyword{internal} diff --git a/man/layout.sugiyama.Rd b/man/layout.sugiyama.Rd index fd4c396502b..c73e688eb65 100644 --- a/man/layout.sugiyama.Rd +++ b/man/layout.sugiyama.Rd @@ -50,7 +50,7 @@ them.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sugiyama}{\code{layout_sugiyama()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sugiyama}{\code{layout_sugiyama}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout.svd.Rd b/man/layout.svd.Rd index 08f44ed6d11..60ed3c6c4a3 100644 --- a/man/layout.svd.Rd +++ b/man/layout.svd.Rd @@ -20,7 +20,7 @@ Layout coordinates, a two column matrix. Now it calls the Fruchterman-Reingold layout \code{\link[=layout_with_fr]{layout_with_fr()}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/layout_as_bipartite.Rd b/man/layout_as_bipartite.Rd index 93196d3f435..b3895e766e9 100644 --- a/man/layout_as_bipartite.Rd +++ b/man/layout_as_bipartite.Rd @@ -44,7 +44,7 @@ edge crossings, using the Sugiyama algorithm (see \code{\link[=layout_with_sugiyama]{layout_with_sugiyama()}}). } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_bipartite}{\code{layout_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_bipartite}{\code{layout_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/layout_as_star.Rd b/man/layout_as_star.Rd index df82c10d561..5b9a86bfef1 100644 --- a/man/layout_as_star.Rd +++ b/man/layout_as_star.Rd @@ -33,7 +33,7 @@ It is possible to choose the vertex that will be in the center, and the order of the vertices can be also given. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_star}{\code{layout_star()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_star}{\code{layout_star}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle}} } \examples{ diff --git a/man/layout_as_tree.Rd b/man/layout_as_tree.Rd index 4437d5c136a..b7a4827dec7 100644 --- a/man/layout_as_tree.Rd +++ b/man/layout_as_tree.Rd @@ -64,7 +64,7 @@ If the given graph is not a tree, a breadth-first search is executed first to obtain a possible spanning tree. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/layout_in_circle.Rd b/man/layout_in_circle.Rd index 7c3b29e2906..6814db1e8ab 100644 --- a/man/layout_in_circle.Rd +++ b/man/layout_in_circle.Rd @@ -29,7 +29,7 @@ If you want to order the vertices differently, then permute them using the \code{\link[=permute]{permute()}} function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_circle}{\code{layout_circle}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/layout_nicely.Rd b/man/layout_nicely.Rd index 311274d87c1..f862ddced96 100644 --- a/man/layout_nicely.Rd +++ b/man/layout_nicely.Rd @@ -59,7 +59,7 @@ forward the weights to these functions and issue a warning about this. You can use \code{weights = NA} to silence the warning. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_align}{\code{layout_align}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_is_forest}{\code{is_forest}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \seealso{ diff --git a/man/layout_on_grid.Rd b/man/layout_on_grid.Rd index 885cb76fa80..95aa250d6d2 100644 --- a/man/layout_on_grid.Rd +++ b/man/layout_on_grid.Rd @@ -38,7 +38,7 @@ other. If you want to change the order of the vertices, then see the \code{\link[=permute]{permute()}} function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid}{\code{layout_grid()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid_3d}{\code{layout_grid_3d()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid}{\code{layout_grid}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_grid_3d}{\code{layout_grid_3d}} } \examples{ diff --git a/man/layout_on_sphere.Rd b/man/layout_on_sphere.Rd index 12a8817278f..a88afe7cf8e 100644 --- a/man/layout_on_sphere.Rd +++ b/man/layout_on_sphere.Rd @@ -30,7 +30,7 @@ If you want to order the vertices differently, then permute them using the \code{\link[=permute]{permute()}} function. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sphere}{\code{layout_sphere()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sphere}{\code{layout_sphere}} } \seealso{ diff --git a/man/layout_randomly.Rd b/man/layout_randomly.Rd index c9252dd82bd..241eced6ccb 100644 --- a/man/layout_randomly.Rd +++ b/man/layout_randomly.Rd @@ -30,7 +30,7 @@ is probably a useless layout, but it can use as a starting point for other layout generators. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_random}{\code{layout_random()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_random_3d}{\code{layout_random_3d()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_random}{\code{layout_random}}, \href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_random_3d}{\code{layout_random_3d}} } \seealso{ diff --git a/man/layout_with_dh.Rd b/man/layout_with_dh.Rd index d6c6ec15c61..f1d1ad2ebd9 100644 --- a/man/layout_with_dh.Rd +++ b/man/layout_with_dh.Rd @@ -85,7 +85,7 @@ possible. The only major difference is that coordinates are explicitly kept within the bounds of the rectangle of the layout. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_davidson_harel}{\code{layout_davidson_harel()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_davidson_harel}{\code{layout_davidson_harel}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_density}{\code{density}} } \examples{ diff --git a/man/layout_with_drl.Rd b/man/layout_with_drl.Rd index 16781d7ede3..caa273d7821 100644 --- a/man/layout_with_drl.Rd +++ b/man/layout_with_drl.Rd @@ -145,7 +145,7 @@ There are five pre-defined parameter settings as well, these are called \code{drl_defaults$final}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/layout_with_fr.Rd b/man/layout_with_fr.Rd index 70f8316f4b5..bbc35e6bd1c 100644 --- a/man/layout_with_fr.Rd +++ b/man/layout_with_fr.Rd @@ -96,7 +96,7 @@ See the referenced paper below for the details of the algorithm. This function was rewritten from scratch in igraph version 0.8.0. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/layout_with_gem.Rd b/man/layout_with_gem.Rd index 495e83b2206..ca96f7db974 100644 --- a/man/layout_with_gem.Rd +++ b/man/layout_with_gem.Rd @@ -51,7 +51,7 @@ Place vertices on the plane using the GEM force-directed layout algorithm. See the referenced paper below for the details of the algorithm. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_gem}{\code{layout_gem()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_gem}{\code{layout_gem}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/layout_with_kk.Rd b/man/layout_with_kk.Rd index 7bd47c2b2b1..559a04bf322 100644 --- a/man/layout_with_kk.Rd +++ b/man/layout_with_kk.Rd @@ -95,7 +95,7 @@ This function was rewritten from scratch in igraph version 0.8.0 and it follows truthfully the original publication by Kamada and Kawai now. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/layout_with_lgl.Rd b/man/layout_with_lgl.Rd index e2086d39154..d336fcc48e1 100644 --- a/man/layout_with_lgl.Rd +++ b/man/layout_with_lgl.Rd @@ -56,7 +56,7 @@ generator of the Large Graph Layout software (\url{https://lgl.sourceforge.net/}). } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \seealso{ diff --git a/man/layout_with_mds.Rd b/man/layout_with_mds.Rd index dfc38c0402f..fe0513f3b59 100644 --- a/man/layout_with_mds.Rd +++ b/man/layout_with_mds.Rd @@ -49,7 +49,7 @@ This function generates the layout separately for each graph component and then merges them via \code{\link[=merge_coords]{merge_coords()}}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_mds}{\code{layout_mds()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_mds}{\code{layout_mds}} } \examples{ diff --git a/man/layout_with_sugiyama.Rd b/man/layout_with_sugiyama.Rd index 588fe651787..87b5fe8b611 100644 --- a/man/layout_with_sugiyama.Rd +++ b/man/layout_with_sugiyama.Rd @@ -92,7 +92,7 @@ the dummy nodes. For more details, see the reference below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sugiyama}{\code{layout_sugiyama()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Layout.html#igraph_layout_sugiyama}{\code{layout_sugiyama}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_get_edgelist}{\code{get_edgelist}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_is_directed}{\code{is_directed}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/leading.eigenvector.community.Rd b/man/leading.eigenvector.community.Rd index 45c9881f8f2..ed059d87f20 100644 --- a/man/leading.eigenvector.community.Rd +++ b/man/leading.eigenvector.community.Rd @@ -50,7 +50,7 @@ the modularity matrix. See details below.} consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \keyword{internal} diff --git a/man/line.graph.Rd b/man/line.graph.Rd index e4bf1142c52..5a239e0f226 100644 --- a/man/line.graph.Rd +++ b/man/line.graph.Rd @@ -16,7 +16,7 @@ line.graph(graph) consistent API. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_linegraph}{\code{linegraph()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_linegraph}{\code{linegraph}} } \keyword{internal} diff --git a/man/local_scan.Rd b/man/local_scan.Rd index 290f27b0551..683b17a75a6 100644 --- a/man/local_scan.Rd +++ b/man/local_scan.Rd @@ -84,7 +84,7 @@ information, and applying \code{FUN} on these neighborhoods in \code{graph.them}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_0}{\code{local_scan_0()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_0_them}{\code{local_scan_0_them()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_1_ecount}{\code{local_scan_1_ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_1_ecount_them}{\code{local_scan_1_ecount_them()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_k_ecount}{\code{local_scan_k_ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_k_ecount_them}{\code{local_scan_k_ecount_them()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_neighborhood_ecount}{\code{local_scan_neighborhood_ecount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_0}{\code{local_scan_0}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_0_them}{\code{local_scan_0_them}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_1_ecount}{\code{local_scan_1_ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_1_ecount_them}{\code{local_scan_1_ecount_them}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_k_ecount}{\code{local_scan_k_ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_k_ecount_them}{\code{local_scan_k_ecount_them}}, \href{https://igraph.org/c/html/0.10.17/igraph-Structural.html#igraph_local_scan_neighborhood_ecount}{\code{local_scan_neighborhood_ecount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_induced_subgraph}{\code{induced_subgraph}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/make_.Rd b/man/make_.Rd index 9a6d9536a2d..50c7ccabbf8 100644 --- a/man/make_.Rd +++ b/man/make_.Rd @@ -31,7 +31,7 @@ to the newly created graphs. See the examples and the various constructor modifiers below. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Operators.html#igraph_simplify}{\code{simplify}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_edges}{\code{edges}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_get_eids}{\code{get_eids}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_ecount}{\code{ecount}} } \examples{ diff --git a/man/make_bipartite_graph.Rd b/man/make_bipartite_graph.Rd index 64680704683..ad7ec485c0f 100644 --- a/man/make_bipartite_graph.Rd +++ b/man/make_bipartite_graph.Rd @@ -47,7 +47,7 @@ vertex names; in this case, \code{types} must be a named vector that specifies the type for each vertex name that occurs in \code{edges}. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_create_bipartite}{\code{create_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_create_bipartite}{\code{create_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/make_chordal_ring.Rd b/man/make_chordal_ring.Rd index c69ae1dc651..ae716aacfbe 100644 --- a/man/make_chordal_ring.Rd +++ b/man/make_chordal_ring.Rd @@ -34,7 +34,7 @@ of total nodes. See also Kotsis, G: Interconnection Topologies for Parallel Processing Systems, PARS Mitteilungen 11, 1-6, 1993. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_extended_chordal_ring}{\code{extended_chordal_ring()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_extended_chordal_ring}{\code{extended_chordal_ring}} } \examples{ diff --git a/man/make_circulant.Rd b/man/make_circulant.Rd index 1f404e150b6..3954bf90c82 100644 --- a/man/make_circulant.Rd +++ b/man/make_circulant.Rd @@ -29,7 +29,7 @@ The function can generate either directed or undirected graphs. It does not generate multi-edges or self-loops. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_circulant}{\code{circulant()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_circulant}{\code{circulant}} } \examples{ diff --git a/man/make_de_bruijn_graph.Rd b/man/make_de_bruijn_graph.Rd index 4af4910b84f..f327b6c5512 100644 --- a/man/make_de_bruijn_graph.Rd +++ b/man/make_de_bruijn_graph.Rd @@ -36,7 +36,7 @@ De Bruijn graphs have some interesting properties, please see another source, e.g. Wikipedia for details. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_de_bruijn}{\code{de_bruijn()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_de_bruijn}{\code{de_bruijn}} } \examples{ diff --git a/man/make_empty_graph.Rd b/man/make_empty_graph.Rd index 4f4752289ab..5e943824fd5 100644 --- a/man/make_empty_graph.Rd +++ b/man/make_empty_graph.Rd @@ -21,7 +21,7 @@ An igraph graph. A graph with no edges } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_empty}{\code{empty}} } \examples{ diff --git a/man/make_from_prufer.Rd b/man/make_from_prufer.Rd index 2264959805e..8af6600d38b 100644 --- a/man/make_from_prufer.Rd +++ b/man/make_from_prufer.Rd @@ -27,7 +27,7 @@ the vertex that it was connected to to the sequence. Repeat until there are only two vertices in the remaining graph. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_from_prufer}{\code{from_prufer()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Generators.html#igraph_from_prufer}{\code{from_prufer}} } \examples{ diff --git a/man/make_full_bipartite_graph.Rd b/man/make_full_bipartite_graph.Rd index 2accad21ed9..023bb923066 100644 --- a/man/make_full_bipartite_graph.Rd +++ b/man/make_full_bipartite_graph.Rd @@ -40,7 +40,7 @@ this is boolean and \code{FALSE} for the vertices of the first kind and \code{TRUE} for vertices of the second kind. } \section{Related documentation in the C library}{ -\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_full_bipartite}{\code{full_bipartite()}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount()}} +\href{https://igraph.org/c/html/0.10.17/igraph-Bipartite.html#igraph_full_bipartite}{\code{full_bipartite}}, \href{https://igraph.org/c/html/0.10.17/igraph-Basic.html#igraph_vcount}{\code{vcount}} } \examples{ diff --git a/man/make_full_citation_graph.Rd b/man/make_full_citation_graph.Rd index 927baf40719..ccfcac17a15 100644 --- a/man/make_full_citation_graph.Rd +++ b/man/make_full_citation_graph.Rd @@ -23,7 +23,7 @@ directed graph, where every \code{i->j} edge is present if and only if \eqn{j