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false python-versions = ">=3.10" groups = ["main"] +markers = "python_version == \"3.10\"" files = [ {file = "stevedore-5.8.0-py3-none-any.whl", hash = "sha256:88eede9e66ca80e34085b9174e2327da2c61ac91f24f70e41c3ad76e4bb4872b"}, {file = "stevedore-5.8.0.tar.gz", hash = "sha256:b49867b32ca3016e94100e68dbf26e72aa7b8708d0a3f73c08aeb220370ac715"}, ] +[[package]] +name = "stevedore" +version = "5.9.0" +description = "Manage dynamic plugins for Python applications" +optional = false +python-versions = ">=3.11" +groups = ["main"] +markers = "python_version >= \"3.11\"" +files = [ + {file = "stevedore-5.9.0-py3-none-any.whl", hash = "sha256:e520945d4c257700eddc1eb1d79df04b2ea578eef185e0e3fa5b442fc848d3f7"}, + {file = "stevedore-5.9.0.tar.gz", hash = "sha256:abbd0af7a38a8bbb1d6adea2e35b17609cf004eaac323e88a8d8963640dd2b3c"}, +] + [[package]] name = "structlog" version = "25.5.0" @@ -3887,14 +3904,14 @@ keyring = ["keyring (>=21.2.0)"] [[package]] name = "typer" -version = "0.26.7" +version = "0.26.8" description = "Typer, build great CLIs. Easy to code. Based on Python type hints." optional = false python-versions = ">=3.10" groups = ["main"] files = [ - {file = "typer-0.26.7-py3-none-any.whl", hash = "sha256:5c87cfbc5d34491c5346ebf49c23e18d56ccb863268d3a8d592b26087c2f5e58"}, - {file = "typer-0.26.7.tar.gz", hash = "sha256:e314a34c617e419c091b2830dda3ea1f257134ff593061a8f5b9717ab8dddb3a"}, + {file = "typer-0.26.8-py3-none-any.whl", hash = "sha256:3512ca79ac5c11113414b36e80281b872884477722440691c89d1112e321a49c"}, + {file = "typer-0.26.8.tar.gz", hash = "sha256:c244a6bd558886fe3f8780efb6bdd28bb9aff005a94eedebaa5cb32926fe2f7e"}, ] [package.dependencies] @@ -3917,14 +3934,14 @@ files = [ [[package]] name = "typing-extensions" -version = "4.15.0" +version = "4.16.0" description = "Backported and Experimental Type Hints for Python 3.9+" optional = false python-versions = ">=3.9" groups = ["main", "dev"] files = [ - {file = "typing_extensions-4.15.0-py3-none-any.whl", hash = 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"sha256:faf5b4a5366a72dc49cad48cdf21f52bdf63bdda995178e483ba247ff79089b9"}, + {file = "wcwidth-0.8.2-py3-none-any.whl", hash = "sha256:d63947694a0539a1d51e01eda7caf800c291020e6cdd7e28ad7b14dd33ad4f85"}, + {file = "wcwidth-0.8.2.tar.gz", hash = "sha256:91fbef97204b96a3d4d421609b80340b760cf33e26da123ff243d76b1fda8dda"}, ] [[package]] From 090b352e9207ceb6e517a4f0a19aa8e96eb3ba47 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Fri, 3 Jul 2026 13:43:14 +0200 Subject: [PATCH 02/21] Add git function to test uncommitted path changes --- exasol/toolbox/util/git.py | 13 +++++++++++++ test/unit/util/git_test.py | 39 ++++++++++++++++++++++++++++++++++++++ 2 files changed, 52 insertions(+) diff --git a/exasol/toolbox/util/git.py b/exasol/toolbox/util/git.py index 0322bc4bb..f7e20e8cc 100644 --- a/exasol/toolbox/util/git.py +++ b/exasol/toolbox/util/git.py @@ -51,3 +51,16 @@ def create_and_switch_to_branch(branch_name: str): @run_command def toplevel(): return ["git", "rev-parse", "--show-toplevel"] + + @staticmethod + def has_uncommitted_path_changes(paths: tuple[Path, ...]) -> bool: + """ + Return whether the given path or paths have uncommitted changes. + """ + command = ["git", "diff", "--quiet", "--", *map(str, paths)] + result = subprocess.run( + command, + capture_output=True, + cwd=Git.toplevel(), + ) # nosec: B603, B607 - fixed git command; repository root is trusted here + return result.returncode != 0 diff --git a/test/unit/util/git_test.py b/test/unit/util/git_test.py index 43bbca4a7..0cbf42bd7 100644 --- a/test/unit/util/git_test.py +++ b/test/unit/util/git_test.py @@ -1,3 +1,5 @@ +import subprocess + import pytest from packaging.version import Version @@ -34,3 +36,40 @@ def test_checkout(tmp_path, read_file_from_tag): Git.checkout(tag=tag, source=POETRY_LOCK, dest=dest) result = dest.read_text() assert result == read_file_from_tag + + @staticmethod + def test_has_uncommitted_path_changes(tmp_path, monkeypatch): + repo_path = tmp_path / "repo" + repo_path.mkdir() + monkeypatch.chdir(repo_path) + + subprocess.run(["git", "init"], check=True, capture_output=True) + subprocess.run( + ["git", "config", "user.email", "test@example.com"], + check=True, + capture_output=True, + ) + subprocess.run( + ["git", "config", "user.name", "Test User"], + check=True, + capture_output=True, + ) + + test_file = repo_path / "test.txt" + test_file.write_text("initial\n") + subprocess.run( + ["git", "add", "test.txt"], + check=True, + capture_output=True, + ) + subprocess.run( + ["git", "commit", "-m", "initial commit"], + check=True, + capture_output=True, + ) + + assert Git.has_uncommitted_path_changes((test_file,)) is False + + test_file.write_text("changed\n") + + assert Git.has_uncommitted_path_changes((test_file,)) is True From b84a3c13bb4f6fb9c9b329b073f589501ed57bdd Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 10:22:50 +0200 Subject: [PATCH 03/21] Add git function for add & commit --- exasol/toolbox/nox/_release.py | 30 +++++++++++------------- exasol/toolbox/util/git.py | 16 +++++++++++++ exasol/toolbox/util/release/changelog.py | 4 ++-- test/unit/util/git_test.py | 14 +++-------- 4 files changed, 35 insertions(+), 29 deletions(-) diff --git a/exasol/toolbox/nox/_release.py b/exasol/toolbox/nox/_release.py index a855cb7d3..64aa2993c 100644 --- a/exasol/toolbox/nox/_release.py +++ b/exasol/toolbox/nox/_release.py @@ -62,9 +62,14 @@ def _get_changelogs(version: Version) -> Changelog: ) -def _add_files_to_index(session: Session, files: list[Path]) -> None: - for file in files: - session.run("git", "add", f"{file}") +def _collect_release_files(session: Session, pm) -> tuple[Path, ...]: + return tuple( + path + for plugin_files in pm.hook.prepare_release_add_files( + session=session, config=PROJECT_CONFIG + ) + for path in plugin_files + ) class ReleaseError(Exception): @@ -120,9 +125,7 @@ def prepare_release(session: Session) -> None: if not args.no_branch and not args.no_add: Git.create_and_switch_to_branch(f"release/prepare-{new_version}") - changed_files = ( - _get_changelogs(version=new_version).prepare_release().get_changed_files() - ) + changelogs = _get_changelogs(version=new_version).prepare_release() pm = NoxTasks.plugin_manager(PROJECT_CONFIG) pm.hook.prepare_release_update_version( @@ -132,16 +135,11 @@ def prepare_release(session: Session) -> None: if args.no_add: return - changed_files += [ - PROJECT_CONFIG.root_path / PoetryFiles.pyproject_toml, - ] - results = pm.hook.prepare_release_add_files(session=session, config=PROJECT_CONFIG) - changed_files += [f for plugin_response in results for f in plugin_response] - _add_files_to_index( - session, - changed_files, - ) - session.run("git", "commit", "-m", f"Prepare release {new_version}") + version_files = (PROJECT_CONFIG.root_path / PoetryFiles.pyproject_toml,) + release_files = _collect_release_files(session=session, pm=pm) + changed_files = changelogs.get_changed_files() + release_files + version_files + Git.add(changed_files) + Git.commit(f"Prepare release {new_version}") if not args.no_pr: session.run( diff --git a/exasol/toolbox/util/git.py b/exasol/toolbox/util/git.py index f7e20e8cc..0f9ab96b4 100644 --- a/exasol/toolbox/util/git.py +++ b/exasol/toolbox/util/git.py @@ -64,3 +64,19 @@ def has_uncommitted_path_changes(paths: tuple[Path, ...]) -> bool: cwd=Git.toplevel(), ) # nosec: B603, B607 - fixed git command; repository root is trusted here return result.returncode != 0 + + @staticmethod + @run_command + def add(paths: tuple[Path, ...]): + """ + Stage the given path or paths. + """ + return ["git", "add", *map(str, paths)] + + @staticmethod + @run_command + def commit(message: str): + """ + Create a commit with the given message. + """ + return ["git", "commit", "--message", message] diff --git a/exasol/toolbox/util/release/changelog.py b/exasol/toolbox/util/release/changelog.py index bd3da6cff..6d65bb517 100644 --- a/exasol/toolbox/util/release/changelog.py +++ b/exasol/toolbox/util/release/changelog.py @@ -133,8 +133,8 @@ def _update_table_of_contents(self) -> None: self.changelog.write_text(updated_content_str) - def get_changed_files(self) -> list[Path]: - return [self.unreleased, self.versioned_changes, self.changelog] + def get_changed_files(self) -> tuple[Path, ...]: + return self.unreleased, self.versioned_changes, self.changelog def _resolved_vulnerabilities(self) -> Markdown | None: try: diff --git a/test/unit/util/git_test.py b/test/unit/util/git_test.py index 0cbf42bd7..c96182fcc 100644 --- a/test/unit/util/git_test.py +++ b/test/unit/util/git_test.py @@ -38,7 +38,7 @@ def test_checkout(tmp_path, read_file_from_tag): assert result == read_file_from_tag @staticmethod - def test_has_uncommitted_path_changes(tmp_path, monkeypatch): + def test_detects_working_tree_changes(tmp_path, monkeypatch): repo_path = tmp_path / "repo" repo_path.mkdir() monkeypatch.chdir(repo_path) @@ -57,16 +57,8 @@ def test_has_uncommitted_path_changes(tmp_path, monkeypatch): test_file = repo_path / "test.txt" test_file.write_text("initial\n") - subprocess.run( - ["git", "add", "test.txt"], - check=True, - capture_output=True, - ) - subprocess.run( - ["git", "commit", "-m", "initial commit"], - check=True, - capture_output=True, - ) + Git.add((test_file,)) + Git.commit("initial commit") assert Git.has_uncommitted_path_changes((test_file,)) is False From 0a89840c1fa3754dfead38a5c6dd23fe8d623928 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 10:50:30 +0200 Subject: [PATCH 04/21] Add report_json for more human readable performance --- exasol/toolbox/util/dependencies/audit.py | 15 +++++++++++++++ test/conftest.py | 10 ++++++++++ test/unit/util/dependencies/audit_test.py | 8 ++++++++ 3 files changed, 33 insertions(+) diff --git a/exasol/toolbox/util/dependencies/audit.py b/exasol/toolbox/util/dependencies/audit.py index 2bde320ae..8563f61b3 100644 --- a/exasol/toolbox/util/dependencies/audit.py +++ b/exasol/toolbox/util/dependencies/audit.py @@ -278,10 +278,25 @@ def load_from_pip_audit(cls, working_directory: Path) -> Vulnerabilities: @property def security_issue_dict(self) -> list[PipAuditEntry]: + """Return pip-audit-compatible entries for `tbx security cve convert`.""" return [ vulnerability.security_issue_entry for vulnerability in self.vulnerabilities ] + @property + def report_json(self) -> str: + """Return a compact JSON report.""" + summary = [ + { + "name": vulnerability.package.name, + "version": str(vulnerability.package.version), + "vulnerability": vulnerability.vulnerability_id, + "fix_versions": vulnerability.fix_versions, + } + for vulnerability in self.vulnerabilities + ] + return json.dumps(summary, indent=2) + def get_vulnerabilities(working_directory: Path) -> list[Vulnerability]: return Vulnerabilities.load_from_pip_audit( diff --git a/test/conftest.py b/test/conftest.py index dcb62102c..bb0c59878 100644 --- a/test/conftest.py +++ b/test/conftest.py @@ -58,6 +58,16 @@ def pip_audit_json(self) -> str: } ) + @property + def report_json(self) -> str: + report_json = { + "name": self.package_name, + "version": self.version, + "vulnerability": self.cve_id, + "fix_versions": [self.fix_version], + } + return json.dumps([report_json], indent=2) + @property def vulnerability(self) -> Vulnerability: return Vulnerability.from_audit_entry( diff --git a/test/unit/util/dependencies/audit_test.py b/test/unit/util/dependencies/audit_test.py index d41c3f998..4d99ec9b5 100644 --- a/test/unit/util/dependencies/audit_test.py +++ b/test/unit/util/dependencies/audit_test.py @@ -324,6 +324,14 @@ def test_security_issue_dict(sample_vulnerability): result = vulnerabilities.security_issue_dict assert result == [sample_vulnerability.security_issue_entry] + @staticmethod + def test_report_json(sample_vulnerability): + vulnerabilities = Vulnerabilities( + vulnerabilities=[sample_vulnerability.vulnerability] + ) + result = vulnerabilities.report_json + assert result == sample_vulnerability.report_json + @pytest.mark.parametrize( "prefix,expected", From 1c661be29dc18f37491488b3745a4f02db745858 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:23:22 +0200 Subject: [PATCH 05/21] Add DependencyUpdater --- .../util/dependencies/update_dependencies.py | 55 ++++++++++ .../dependencies/update_dependencies_test.py | 100 ++++++++++++++++++ 2 files changed, 155 insertions(+) create mode 100644 exasol/toolbox/util/dependencies/update_dependencies.py create mode 100644 test/unit/util/dependencies/update_dependencies_test.py diff --git a/exasol/toolbox/util/dependencies/update_dependencies.py b/exasol/toolbox/util/dependencies/update_dependencies.py new file mode 100644 index 000000000..938e6f337 --- /dev/null +++ b/exasol/toolbox/util/dependencies/update_dependencies.py @@ -0,0 +1,55 @@ +from __future__ import annotations + +import subprocess # nosec: B404 - risk of subprocess is accepted +from pathlib import Path + +from pydantic import ( + BaseModel, + ConfigDict, + computed_field, +) + +from exasol.toolbox.util.dependencies.audit import Vulnerabilities +from exasol.toolbox.util.dependencies.shared_models import PoetryFiles +from exasol.toolbox.util.git import Git + + +class DependencyUpdater(BaseModel): + model_config = ConfigDict(frozen=True, arbitrary_types_allowed=True) + + root_path: Path + + @computed_field # type: ignore[misc] + @property + def poetry_lock_path(self) -> Path: + return self.root_path / PoetryFiles.poetry_lock + + def _get_report_json(self) -> str: + vulnerabilities = Vulnerabilities.load_from_pip_audit(self.root_path) + return vulnerabilities.report_json + + def _run_poetry_update(self) -> None: + subprocess.run( # nosec: B603 - fixed poetry command is trusted here + ["poetry", "update"], + cwd=self.root_path, + check=True, + ) + + def update_vulnerable_dependencies(self) -> str | None: + """ + Check for vulnerable dependencies, and if present, attempt to update dependencies. + """ + initial_report = self._get_report_json() + print(initial_report) + if initial_report == "[]": + return None + + self._run_poetry_update() + post_update_report = self._get_report_json() + print(post_update_report) + + if Git.has_uncommitted_path_changes((self.poetry_lock_path,)): + Git.add((self.poetry_lock_path,)) + Git.commit("Updated poetry.lock") + + return post_update_report diff --git a/test/unit/util/dependencies/update_dependencies_test.py b/test/unit/util/dependencies/update_dependencies_test.py new file mode 100644 index 000000000..b5e5c0ed1 --- /dev/null +++ b/test/unit/util/dependencies/update_dependencies_test.py @@ -0,0 +1,100 @@ +from unittest import mock + +import pytest + +from exasol.toolbox.util.dependencies import update_dependencies +from exasol.toolbox.util.dependencies.audit import Vulnerabilities + + +@pytest.fixture +def mock_load_from_pip_audit(monkeypatch): + load_from_pip_audit = mock.Mock() + monkeypatch.setattr( + update_dependencies.Vulnerabilities, + "load_from_pip_audit", + load_from_pip_audit, + ) + return load_from_pip_audit + + +@pytest.fixture +def mock_subprocess_run(monkeypatch): + run = mock.Mock() + monkeypatch.setattr(update_dependencies.subprocess, "run", run) + return run + + +def set_git_commands(monkeypatch, has_uncommitted_path_changes: bool): + monkeypatch.setattr( + update_dependencies.Git, + "has_uncommitted_path_changes", + mock.Mock(return_value=has_uncommitted_path_changes), + ) + monkeypatch.setattr(update_dependencies.Git, "add", mock.Mock()) + monkeypatch.setattr(update_dependencies.Git, "commit", mock.Mock()) + + +class TestUpdateVulnerableDependencies: + @staticmethod + def test_when_no_vulnerabilities_exits_early( + monkeypatch, mock_load_from_pip_audit, mock_subprocess_run, tmp_path, capsys + ): + mock_load_from_pip_audit.side_effect = [Vulnerabilities(vulnerabilities=[])] + + updater = update_dependencies.DependencyUpdater(root_path=tmp_path) + result = updater.update_vulnerable_dependencies() + + assert capsys.readouterr().out == "[]\n" + mock_subprocess_run.assert_not_called() + assert result is None + + @staticmethod + def test_when_poetry_lock_is_not_updated( + monkeypatch, + mock_load_from_pip_audit, + mock_subprocess_run, + sample_vulnerability, + tmp_path, + ): + mock_load_from_pip_audit.side_effect = [ + # Simulating the `poetry update` does not resolve the situation + Vulnerabilities(vulnerabilities=[sample_vulnerability.vulnerability]), + ] * 2 + set_git_commands(monkeypatch, has_uncommitted_path_changes=False) + mock_subprocess_run.return_value = mock.Mock(returncode=0) + + updater = update_dependencies.DependencyUpdater(root_path=tmp_path) + result = updater.update_vulnerable_dependencies() + + mock_subprocess_run.assert_called_once_with( + ["poetry", "update"], cwd=tmp_path, check=True + ) + update_dependencies.Git.add.assert_not_called() + update_dependencies.Git.commit.assert_not_called() + assert result == sample_vulnerability.report_json + + @staticmethod + def test_when_poetry_lock_is_updated( + monkeypatch, + mock_load_from_pip_audit, + mock_subprocess_run, + sample_vulnerability, + tmp_path, + ): + mock_load_from_pip_audit.side_effect = [ + # Simulating the `poetry update` resolves the vulnerabilities + Vulnerabilities(vulnerabilities=[sample_vulnerability.vulnerability]), + Vulnerabilities(vulnerabilities=[]), + ] + set_git_commands(monkeypatch, has_uncommitted_path_changes=True) + mock_subprocess_run.return_value = mock.Mock(returncode=0) + + updater = update_dependencies.DependencyUpdater(root_path=tmp_path) + result = updater.update_vulnerable_dependencies() + + assert mock_subprocess_run.call_args_list == [ + mock.call(["poetry", "update"], cwd=tmp_path, check=True), + ] + update_dependencies.Git.add.assert_called_once_with((updater.poetry_lock_path,)) + update_dependencies.Git.commit.assert_called_once_with("Updated poetry.lock") + assert result == "[]" From 96f22f5920b6cdbe86c9adf111cd1f136816f104 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:32:51 +0200 Subject: [PATCH 06/21] Add vulnerabilities:update nox session --- exasol/toolbox/nox/_dependencies.py | 27 +++++++++++++- test/unit/nox/_dependencies_test.py | 57 ++++++++++++++++++++++------- 2 files changed, 68 insertions(+), 16 deletions(-) diff --git a/exasol/toolbox/nox/_dependencies.py b/exasol/toolbox/nox/_dependencies.py index c6c64401e..bd887fdc3 100644 --- a/exasol/toolbox/nox/_dependencies.py +++ b/exasol/toolbox/nox/_dependencies.py @@ -18,6 +18,7 @@ ) from exasol.toolbox.util.dependencies.poetry_dependencies import get_dependencies from exasol.toolbox.util.dependencies.track_vulnerabilities import DependenciesAudit +from exasol.toolbox.util.dependencies.update_dependencies import DependencyUpdater from noxconfig import PROJECT_CONFIG @@ -35,9 +36,10 @@ def dependency_licenses(session: Session) -> None: @nox.session(name="dependency:audit", python=False) def audit(session: Session) -> None: """Report known vulnerabilities.""" - try: - vulnerabilities = Vulnerabilities.load_from_pip_audit(working_directory=Path()) + vulnerabilities = Vulnerabilities.load_from_pip_audit( + working_directory=PROJECT_CONFIG.root_path + ) except PipAuditException as e: session.error(e.returncode, e.stdout, e.stderr) @@ -45,6 +47,27 @@ def audit(session: Session) -> None: print(json.dumps(security_issue_dict, indent=2)) +@nox.session(name="vulnerabilities:update", python=False) +def update_vulnerabilities(session: Session) -> None: + """ + Update vulnerabilities, and save the JSON of remaining vulnerabilities to + `VULNERABILITIES_UPDATE_REPORT_PATH` if it is set in the environment. + """ + try: + dependency_updater = DependencyUpdater(root_path=PROJECT_CONFIG.root_path) + report_json = dependency_updater.update_vulnerable_dependencies() + except PipAuditException as e: + session.error(e.returncode, e.stdout, e.stderr) + + report_path = session.env.get("VULNERABILITIES_UPDATE_REPORT_PATH", None) + if report_json is None or report_path is None: + return + + report_path = Path(report_path) + report_path.parent.mkdir(parents=True, exist_ok=True) + report_path.write_text(report_json + "\n", encoding="utf-8") + + @nox.session(name="vulnerabilities:resolved", python=False) def report_resolved_vulnerabilities(session: Session) -> None: """Report resolved vulnerabilities in dependencies.""" diff --git a/test/unit/nox/_dependencies_test.py b/test/unit/nox/_dependencies_test.py index b3525a7ec..efb1470eb 100644 --- a/test/unit/nox/_dependencies_test.py +++ b/test/unit/nox/_dependencies_test.py @@ -5,22 +5,51 @@ def test_audit(monkeypatch, nox_session, sample_vulnerability, capsys): - monkeypatch.setattr(_dependencies, "Vulnerabilities", Mock()) - _dependencies.Vulnerabilities.load_from_pip_audit.return_value = Vulnerabilities( - vulnerabilities=[sample_vulnerability.vulnerability] + monkeypatch.setattr( + _dependencies.Vulnerabilities, + "load_from_pip_audit", + Mock( + return_value=Vulnerabilities( + vulnerabilities=[sample_vulnerability.vulnerability] + ) + ), ) _dependencies.audit(nox_session) assert capsys.readouterr().out == sample_vulnerability.nox_dependencies_audit -def test_report_resolved_vulnerabilities( - monkeypatch, nox_session, capsys, sample_vulnerability -): - monkeypatch.setattr( - _dependencies, - "get_vulnerabilities_from_latest_tag", - Mock(return_value=[sample_vulnerability.vulnerability]), - ) - monkeypatch.setattr(_dependencies, "get_vulnerabilities", Mock(return_value=[])) - _dependencies.report_resolved_vulnerabilities(nox_session) - assert "| jinja2 | CVE-2025-27516 | 3.1.5 | 3.1.6 |" in capsys.readouterr().out +class TestUpdateVulnerabilities: + @staticmethod + def test_writes_report_when_path_is_set(monkeypatch, nox_session, tmp_path): + delegate = Mock(return_value="[]") + monkeypatch.setattr( + _dependencies.DependencyUpdater, + "update_vulnerable_dependencies", + delegate, + ) + report_path = tmp_path / "vulnerabilities.json" + nox_session.env["VULNERABILITIES_UPDATE_REPORT_PATH"] = str(report_path) + + _dependencies.update_vulnerabilities(nox_session) + + assert delegate.call_count == 1 + assert report_path.read_text() == "[]\n" + + @staticmethod + def test_does_not_write_report_when_path_is_unset( + monkeypatch, nox_session, tmp_path + ): + delegate = Mock(return_value="[]") + monkeypatch.setattr( + _dependencies.DependencyUpdater, + "update_vulnerable_dependencies", + delegate, + ) + + write_text = Mock() + monkeypatch.setattr(tmp_path.__class__, "write_text", write_text, raising=False) + + _dependencies.update_vulnerabilities(nox_session) + + assert delegate.call_count == 1 + write_text.assert_not_called() From 3117cdc6c06d44840232981fc632b356df87d9cc Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:42:48 +0200 Subject: [PATCH 07/21] Update workflow and documentation; exclude templates from pre-commit hook --- .github/workflows/dependency-update.yml | 69 +++++++++---------- .pre-commit-config.yaml | 1 + doc/changes/unreleased.md | 12 +++- .../features/github_workflows/index.rst | 19 ++--- .../features/managing_dependencies/index.rst | 7 +- .../github/workflows/dependency-update.yml | 69 +++++++++---------- 6 files changed, 91 insertions(+), 86 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index 2945c41ee..f3d5f4747 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -15,6 +15,8 @@ jobs: permissions: contents: write pull-requests: write + env: + VULNERABILITIES_UPDATE_REPORT_PATH: ${{ runner.temp }}/vulnerabilities.json steps: - name: Check out Repository @@ -40,74 +42,65 @@ jobs: python-version: "3.10" poetry-version: "2.3.0" - - name: Audit Dependencies - id: audit-dependencies - run: | - set -o pipefail - poetry self add poetry-plugin-export - # Pipeline purpose: - # - `2>&1`: merge stdout and stderr into one stream. - # - `tee /dev/stderr`: mirror the combined output back to stderr so it stays visible in the logs. - # - `sed -n '/^\[/,$p'`: keep only the JSON payload and write it to vulnerabilities.json. - # With `set -o pipefail`, any failure in the pipeline still fails this step and turns the workflow red. - poetry run -- nox -s dependency:audit 2>&1 | tee /dev/stderr | sed -n '/^\[/,$p' > vulnerabilities.json - LENGTH=$(jq 'length' vulnerabilities.json) - echo "count=$LENGTH" >> "$GITHUB_OUTPUT" - - - name: Update Dependencies - id: update-dependencies - if: steps.audit-dependencies.outputs.count > 0 - run: poetry update - - - name: Check for poetry.lock Changes - id: check-for-poetry-lock-changes - if: steps.audit-dependencies.outputs.count > 0 - run: | - if git diff --quiet -- poetry.lock; then - echo "changed=false" >> "$GITHUB_OUTPUT" - else - echo "changed=true" >> "$GITHUB_OUTPUT" - fi - - name: Configure git id: configure-git - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' run: | git config --global user.email "opensource@exasol.com" git config --global user.name "Automatic Dependency Updater" - name: Create branch id: create-branch - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' run: | branch_name="dependency-update/$(date "+%Y-%m-%d")" echo "Creating branch $branch_name" git switch -C "$branch_name" - - name: Commit Changes & Push + - name: Record current commit + id: record-current-commit + run: | + echo "head_sha=$(git rev-parse HEAD)" >> "$GITHUB_OUTPUT" + + - name: Update Dependencies + id: update-dependencies + run: | + poetry self add poetry-plugin-export + poetry run -- nox -s vulnerabilities:update + + - name: Check for New Commit + id: check-for-new-commit + run: | + if [ "$(git rev-parse HEAD)" = "${{ steps.record-current-commit.outputs.head_sha }}" ]; then + echo "changed=false" >> "$GITHUB_OUTPUT" + else + echo "changed=true" >> "$GITHUB_OUTPUT" + fi + + - name: Push Changes id: publish-branch - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' + if: steps.check-for-new-commit.outputs.changed == 'true' run: | branch_name=$(git rev-parse --abbrev-ref HEAD) - git add poetry.lock - git commit --message "Updated poetry.lock" git push --set-upstream origin "$branch_name" - name: Create Pull Request id: create-pr - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' + if: steps.check-for-new-commit.outputs.changed == 'true' env: GH_TOKEN: ${{ github.token }} run: | BASE_BRANCH=$(gh repo view --json defaultBranchRef -q .defaultBranchRef.name) + DEPENDENCY_UPDATE_REPORT="$(cat "$VULNERABILITIES_UPDATE_REPORT_PATH")" PR_BODY="Automated dependency update for \`poetry.lock\`. This PR was created by the workflow \`dependency-update.yml\` + Remaining vulnerable dependencies after the automated update: + \`\`\`json + ${DEPENDENCY_UPDATE_REPORT} + \`\`\` + Please perform the following actions on a locally checked out branch: - [ ] Execute \`poetry run -- nox -s workflow:generate -- all\` - - [ ] Use \`poetry run -- nox -s dependency:audit\` to check for vulnerabilities requiring manual action - - [ ] Update file \`doc/changes/unreleased.md\` " PR_URL=$(gh pr create \ diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 9da14ce57..33c14a841 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -35,6 +35,7 @@ repos: rev: v5.0.0 hooks: - id: check-yaml + exclude: ^exasol/toolbox/templates/github/workflows/ stages: [ pre-commit ] - id: end-of-file-fixer stages: [ pre-commit ] diff --git a/doc/changes/unreleased.md b/doc/changes/unreleased.md index 8292212a9..3442e0cee 100644 --- a/doc/changes/unreleased.md +++ b/doc/changes/unreleased.md @@ -2,7 +2,17 @@ ## Summary +This minor release adds automated vulnerability updates through Nox session +`vulnerabilities:update` and improves the dependency update workflow +so it can publish the post-update vulnerability summary. It also includes a few +workflow-related bug fixes and documentation updates. + ## Bug * #909: Updated `cd.yml` workflow so that `cd-extension.yml` workflow depends on `build-and-publish`. This ensures that the custom release workflow only runs when the PyPi release was successful. -* #910: Add `gh-pages.yml` to be ignored when `has_documentation=False` in the `PROJECT_CONFIG` +* #910: Added `gh-pages.yml` to be ignored when `has_documentation=False` in the `PROJECT_CONFIG` + +## Feature + +* #898: Created Nox session `vulnerabilities:update` to automatically resolve + vulnerable dependencies and report the result for the dependency update workflow diff --git a/doc/user_guide/features/github_workflows/index.rst b/doc/user_guide/features/github_workflows/index.rst index 0247b7547..529476026 100644 --- a/doc/user_guide/features/github_workflows/index.rst +++ b/doc/user_guide/features/github_workflows/index.rst @@ -39,11 +39,11 @@ Workflows The PTB allows for two categories of workflows: #. those maintained by the PTB, which can be modified using the :ref:`workflow_patcher`. #. custom workflows, which are project-owned. - -Custom workflows can optionally be + +Custom workflows can optionally be * seeded by the PTB, i.e. PTB generates an initial version but ignores future changes. * extend PTB-provided workflows, i.e. ending in `-extension.yml` - + Besides that, you can also create individual workflow files which are ignored by the PTB. Maintained by the PTB @@ -311,14 +311,17 @@ checks for known vulnerabilities and tries to fix them by updating dependencies. :start-at: on: :end-at: workflow_dispatch: -The workflow first audits dependencies for known vulnerabilities: +The workflow runs a dedicated ``vulnerabilities:update`` nox session that audits the +current dependency set and attempts to resolve any detected vulnerabilities: * If no vulnerabilities are detected, then no update is needed. -* If vulnerabilities are detected, it updates the dependencies using ``poetry update``. +* If vulnerabilities are detected, the session updates the dependencies and + records the outcome for the pull request. - * If the ``poetry.lock`` is unchanged, then no further action is taken. - * If the ``poetry.lock`` is changed, then it creates a branch, stages the commit, - creates a pull request, and sends a Slack notification. + * If the update makes no effective change, then no further action is taken. + * If the update changes the dependency state, then the workflow pushes the + resulting commit, includes the post-update summary in the PR description, + opens a pull request, and sends a Slack notification. Afterwards, users need to perform some manual steps which are described in the PR description. diff --git a/doc/user_guide/features/managing_dependencies/index.rst b/doc/user_guide/features/managing_dependencies/index.rst index 2502d6920..88bc0fd67 100644 --- a/doc/user_guide/features/managing_dependencies/index.rst +++ b/doc/user_guide/features/managing_dependencies/index.rst @@ -19,12 +19,17 @@ Managing Dependencies and Vulnerabilities - ``report.yml`` - Uses ``pip-licenses`` to return packages with their licenses. * - ``dependency:audit`` - - ``dependency-update.yml`` + - No - Uses ``pip-audit`` to report active vulnerabilities in our dependencies. * - ``vulnerabilities:resolved`` - No - Uses ``pip-audit`` to report known vulnerabilities in dependencies that have been resolved in comparison to the last release. + * - ``vulnerabilities:update`` + - ``dependency-update.yml`` + - Uses ``pip-audit`` to update dependencies and commit ``poetry.lock`` when + vulnerabilities are found. It also produces a concise JSON summary for + the pull request description. * - ``workflow:audit`` - ``checks.yml`` - Uses ``zizmor`` to audit GitHub actions and workflows for security issues diff --git a/exasol/toolbox/templates/github/workflows/dependency-update.yml b/exasol/toolbox/templates/github/workflows/dependency-update.yml index 7febd11b0..f30e2edc1 100644 --- a/exasol/toolbox/templates/github/workflows/dependency-update.yml +++ b/exasol/toolbox/templates/github/workflows/dependency-update.yml @@ -14,6 +14,8 @@ jobs: permissions: contents: write pull-requests: write + env: + VULNERABILITIES_UPDATE_REPORT_PATH: ${{ runner.temp }}/vulnerabilities.json steps: - name: Check out Repository @@ -39,74 +41,65 @@ jobs: python-version: "(( minimum_python_version ))" poetry-version: "(( dependency_manager_version ))" - - name: Audit Dependencies - id: audit-dependencies - run: | - set -o pipefail - poetry self add poetry-plugin-export - # Pipeline purpose: - # - `2>&1`: merge stdout and stderr into one stream. - # - `tee /dev/stderr`: mirror the combined output back to stderr so it stays visible in the logs. - # - `sed -n '/^\[/,$p'`: keep only the JSON payload and write it to vulnerabilities.json. - # With `set -o pipefail`, any failure in the pipeline still fails this step and turns the workflow red. - poetry run -- nox -s dependency:audit 2>&1 | tee /dev/stderr | sed -n '/^\[/,$p' > vulnerabilities.json - LENGTH=$(jq 'length' vulnerabilities.json) - echo "count=$LENGTH" >> "$GITHUB_OUTPUT" - - - name: Update Dependencies - id: update-dependencies - if: steps.audit-dependencies.outputs.count > 0 - run: poetry update - - - name: Check for poetry.lock Changes - id: check-for-poetry-lock-changes - if: steps.audit-dependencies.outputs.count > 0 - run: | - if git diff --quiet -- poetry.lock; then - echo "changed=false" >> "$GITHUB_OUTPUT" - else - echo "changed=true" >> "$GITHUB_OUTPUT" - fi - - name: Configure git id: configure-git - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' run: | git config --global user.email "opensource@exasol.com" git config --global user.name "Automatic Dependency Updater" - name: Create branch id: create-branch - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' run: | branch_name="dependency-update/$(date "+%Y-%m-%d")" echo "Creating branch $branch_name" git switch -C "$branch_name" - - name: Commit Changes & Push + - name: Record current commit + id: record-current-commit + run: | + echo "head_sha=$(git rev-parse HEAD)" >> "$GITHUB_OUTPUT" + + - name: Update Dependencies + id: update-dependencies + run: | + poetry self add poetry-plugin-export + poetry run -- nox -s vulnerabilities:update + + - name: Check for New Commit + id: check-for-new-commit + run: | + if [ "$(git rev-parse HEAD)" = "${{ steps.record-current-commit.outputs.head_sha }}" ]; then + echo "changed=false" >> "$GITHUB_OUTPUT" + else + echo "changed=true" >> "$GITHUB_OUTPUT" + fi + + - name: Push Changes id: publish-branch - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' + if: steps.check-for-new-commit.outputs.changed == 'true' run: | branch_name=$(git rev-parse --abbrev-ref HEAD) - git add poetry.lock - git commit --message "Updated poetry.lock" git push --set-upstream origin "$branch_name" - name: Create Pull Request id: create-pr - if: steps.check-for-poetry-lock-changes.outputs.changed == 'true' + if: steps.check-for-new-commit.outputs.changed == 'true' env: GH_TOKEN: ${{ github.token }} run: | BASE_BRANCH=$(gh repo view --json defaultBranchRef -q .defaultBranchRef.name) + DEPENDENCY_UPDATE_REPORT="$(cat "$VULNERABILITIES_UPDATE_REPORT_PATH")" PR_BODY="Automated dependency update for \`poetry.lock\`. This PR was created by the workflow \`dependency-update.yml\` + Remaining vulnerable dependencies after the automated update: + \`\`\`json + ${DEPENDENCY_UPDATE_REPORT} + \`\`\` + Please perform the following actions on a locally checked out branch: - [ ] Execute \`poetry run -- nox -s workflow:generate -- all\` - - [ ] Use \`poetry run -- nox -s dependency:audit\` to check for vulnerabilities requiring manual action - - [ ] Update file \`doc/changes/unreleased.md\` " PR_URL=$(gh pr create \ From 3be69341c1eaa67ae3c0743ab0b7b456f25ed6da Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:44:43 +0200 Subject: [PATCH 08/21] Fix type warnings --- exasol/toolbox/nox/_dependencies.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/exasol/toolbox/nox/_dependencies.py b/exasol/toolbox/nox/_dependencies.py index bd887fdc3..15a52c51d 100644 --- a/exasol/toolbox/nox/_dependencies.py +++ b/exasol/toolbox/nox/_dependencies.py @@ -59,11 +59,11 @@ def update_vulnerabilities(session: Session) -> None: except PipAuditException as e: session.error(e.returncode, e.stdout, e.stderr) - report_path = session.env.get("VULNERABILITIES_UPDATE_REPORT_PATH", None) - if report_json is None or report_path is None: + report_path_str = session.env.get("VULNERABILITIES_UPDATE_REPORT_PATH", None) + if report_json is None or report_path_str is None: return - report_path = Path(report_path) + report_path = Path(report_path_str) report_path.parent.mkdir(parents=True, exist_ok=True) report_path.write_text(report_json + "\n", encoding="utf-8") From bee9702755030814b580245e8b90ac468504c83c Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:49:48 +0200 Subject: [PATCH 09/21] Fix workflow:audit --- .github/workflows/dependency-update.yml | 4 +++- .../toolbox/templates/github/workflows/dependency-update.yml | 4 +++- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index f3d5f4747..c3ad116ed 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -68,8 +68,10 @@ jobs: - name: Check for New Commit id: check-for-new-commit + env: + PRE_UPDATE_HEAD_SHA: ${{ steps.record-current-commit.outputs.head_sha }} run: | - if [ "$(git rev-parse HEAD)" = "${{ steps.record-current-commit.outputs.head_sha }}" ]; then + if [ "$(git rev-parse HEAD)" = "$PRE_UPDATE_HEAD_SHA" ]; then echo "changed=false" >> "$GITHUB_OUTPUT" else echo "changed=true" >> "$GITHUB_OUTPUT" diff --git a/exasol/toolbox/templates/github/workflows/dependency-update.yml b/exasol/toolbox/templates/github/workflows/dependency-update.yml index f30e2edc1..93447a91c 100644 --- a/exasol/toolbox/templates/github/workflows/dependency-update.yml +++ b/exasol/toolbox/templates/github/workflows/dependency-update.yml @@ -67,8 +67,10 @@ jobs: - name: Check for New Commit id: check-for-new-commit + env: + PRE_UPDATE_HEAD_SHA: ${{ steps.record-current-commit.outputs.head_sha }} run: | - if [ "$(git rev-parse HEAD)" = "${{ steps.record-current-commit.outputs.head_sha }}" ]; then + if [ "$(git rev-parse HEAD)" = "$PRE_UPDATE_HEAD_SHA" ]; then echo "changed=false" >> "$GITHUB_OUTPUT" else echo "changed=true" >> "$GITHUB_OUTPUT" From 273a896b530fb7898b5a101ad43bb81a7765ff19 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 11:53:11 +0200 Subject: [PATCH 10/21] Fix wip with runner temp directory - can just do cwd as github --- .github/workflows/dependency-update.yml | 4 ++-- .../toolbox/templates/github/workflows/dependency-update.yml | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index c3ad116ed..c6ebbe7f6 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -15,8 +15,6 @@ jobs: permissions: contents: write pull-requests: write - env: - VULNERABILITIES_UPDATE_REPORT_PATH: ${{ runner.temp }}/vulnerabilities.json steps: - name: Check out Repository @@ -62,6 +60,8 @@ jobs: - name: Update Dependencies id: update-dependencies + env: + VULNERABILITIES_UPDATE_REPORT_PATH: vulnerabilities.json run: | poetry self add poetry-plugin-export poetry run -- nox -s vulnerabilities:update diff --git a/exasol/toolbox/templates/github/workflows/dependency-update.yml b/exasol/toolbox/templates/github/workflows/dependency-update.yml index 93447a91c..91a6922cc 100644 --- a/exasol/toolbox/templates/github/workflows/dependency-update.yml +++ b/exasol/toolbox/templates/github/workflows/dependency-update.yml @@ -14,8 +14,6 @@ jobs: permissions: contents: write pull-requests: write - env: - VULNERABILITIES_UPDATE_REPORT_PATH: ${{ runner.temp }}/vulnerabilities.json steps: - name: Check out Repository @@ -61,6 +59,8 @@ jobs: - name: Update Dependencies id: update-dependencies + env: + VULNERABILITIES_UPDATE_REPORT_PATH: vulnerabilities.json run: | poetry self add poetry-plugin-export poetry run -- nox -s vulnerabilities:update From ca3eb619bba03a65dbb8adc35d8882e9310a6e00 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 12:07:22 +0200 Subject: [PATCH 11/21] Resolve bandit warning --- exasol/toolbox/util/dependencies/update_dependencies.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/exasol/toolbox/util/dependencies/update_dependencies.py b/exasol/toolbox/util/dependencies/update_dependencies.py index 938e6f337..b2e903c25 100644 --- a/exasol/toolbox/util/dependencies/update_dependencies.py +++ b/exasol/toolbox/util/dependencies/update_dependencies.py @@ -29,7 +29,7 @@ def _get_report_json(self) -> str: return vulnerabilities.report_json def _run_poetry_update(self) -> None: - subprocess.run( # nosec: B603 - fixed poetry command is trusted here + subprocess.run( # nosec: B603, B607 - trusted fixed poetry command path ["poetry", "update"], cwd=self.root_path, check=True, From 17e649c2f2a845576224417c229e20e0a8a5aeab Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 12:10:31 +0200 Subject: [PATCH 12/21] Tighten wording --- doc/changes/unreleased.md | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/doc/changes/unreleased.md b/doc/changes/unreleased.md index 3442e0cee..c1832fb48 100644 --- a/doc/changes/unreleased.md +++ b/doc/changes/unreleased.md @@ -3,9 +3,8 @@ ## Summary This minor release adds automated vulnerability updates through Nox session -`vulnerabilities:update` and improves the dependency update workflow -so it can publish the post-update vulnerability summary. It also includes a few -workflow-related bug fixes and documentation updates. +`vulnerabilities:update` and improves the `dependency-update.yml`. It also includes a +few workflow-related bug fixes and documentation updates. ## Bug From 383ccb98741e11f667e0e0838494c235729b710d Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 13:39:56 +0200 Subject: [PATCH 13/21] Update CLI and dependency-update.yml after testing --- .github/workflows/dependency-update.yml | 6 ++---- exasol/toolbox/nox/_dependencies.py | 21 ++++++++++++++----- .../github/workflows/dependency-update.yml | 6 ++---- test/unit/nox/_dependencies_test.py | 14 +++++++++---- 4 files changed, 30 insertions(+), 17 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index c6ebbe7f6..771519540 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -60,11 +60,9 @@ jobs: - name: Update Dependencies id: update-dependencies - env: - VULNERABILITIES_UPDATE_REPORT_PATH: vulnerabilities.json run: | poetry self add poetry-plugin-export - poetry run -- nox -s vulnerabilities:update + poetry run -- nox -s vulnerabilities:update -- vulnerabilities.json - name: Check for New Commit id: check-for-new-commit @@ -91,7 +89,7 @@ jobs: GH_TOKEN: ${{ github.token }} run: | BASE_BRANCH=$(gh repo view --json defaultBranchRef -q .defaultBranchRef.name) - DEPENDENCY_UPDATE_REPORT="$(cat "$VULNERABILITIES_UPDATE_REPORT_PATH")" + DEPENDENCY_UPDATE_REPORT="$(cat vulnerabilities.json)" PR_BODY="Automated dependency update for \`poetry.lock\`. This PR was created by the workflow \`dependency-update.yml\` diff --git a/exasol/toolbox/nox/_dependencies.py b/exasol/toolbox/nox/_dependencies.py index 15a52c51d..4dc81bf12 100644 --- a/exasol/toolbox/nox/_dependencies.py +++ b/exasol/toolbox/nox/_dependencies.py @@ -1,5 +1,6 @@ from __future__ import annotations +import argparse import json from pathlib import Path @@ -50,20 +51,30 @@ def audit(session: Session) -> None: @nox.session(name="vulnerabilities:update", python=False) def update_vulnerabilities(session: Session) -> None: """ - Update vulnerabilities, and save the JSON of remaining vulnerabilities to - `VULNERABILITIES_UPDATE_REPORT_PATH` if it is set in the environment. + Update vulnerabilities and optionally save the JSON of remaining vulnerabilities + to a file provided on the command line. """ + parser = argparse.ArgumentParser( + prog="nox -s vulnerabilities:update", + description="Update vulnerable dependencies and optionally write a report file.", + ) + parser.add_argument( + "report_path", + nargs="?", + help="Optional path for the JSON report of remaining vulnerabilities.", + ) + args = parser.parse_args(session.posargs) + try: dependency_updater = DependencyUpdater(root_path=PROJECT_CONFIG.root_path) report_json = dependency_updater.update_vulnerable_dependencies() except PipAuditException as e: session.error(e.returncode, e.stdout, e.stderr) - report_path_str = session.env.get("VULNERABILITIES_UPDATE_REPORT_PATH", None) - if report_json is None or report_path_str is None: + if report_json is None or args.report_path is None: return - report_path = Path(report_path_str) + report_path = Path(args.report_path) report_path.parent.mkdir(parents=True, exist_ok=True) report_path.write_text(report_json + "\n", encoding="utf-8") diff --git a/exasol/toolbox/templates/github/workflows/dependency-update.yml b/exasol/toolbox/templates/github/workflows/dependency-update.yml index 91a6922cc..8719d7964 100644 --- a/exasol/toolbox/templates/github/workflows/dependency-update.yml +++ b/exasol/toolbox/templates/github/workflows/dependency-update.yml @@ -59,11 +59,9 @@ jobs: - name: Update Dependencies id: update-dependencies - env: - VULNERABILITIES_UPDATE_REPORT_PATH: vulnerabilities.json run: | poetry self add poetry-plugin-export - poetry run -- nox -s vulnerabilities:update + poetry run -- nox -s vulnerabilities:update -- vulnerabilities.json - name: Check for New Commit id: check-for-new-commit @@ -90,7 +88,7 @@ jobs: GH_TOKEN: ${{ github.token }} run: | BASE_BRANCH=$(gh repo view --json defaultBranchRef -q .defaultBranchRef.name) - DEPENDENCY_UPDATE_REPORT="$(cat "$VULNERABILITIES_UPDATE_REPORT_PATH")" + DEPENDENCY_UPDATE_REPORT="$(cat vulnerabilities.json)" PR_BODY="Automated dependency update for \`poetry.lock\`. This PR was created by the workflow \`dependency-update.yml\` diff --git a/test/unit/nox/_dependencies_test.py b/test/unit/nox/_dependencies_test.py index efb1470eb..34c1cd5a1 100644 --- a/test/unit/nox/_dependencies_test.py +++ b/test/unit/nox/_dependencies_test.py @@ -1,5 +1,8 @@ +from pathlib import Path from unittest.mock import Mock +import pytest + from exasol.toolbox.nox import _dependencies from exasol.toolbox.util.dependencies.audit import Vulnerabilities @@ -20,7 +23,12 @@ def test_audit(monkeypatch, nox_session, sample_vulnerability, capsys): class TestUpdateVulnerabilities: @staticmethod - def test_writes_report_when_path_is_set(monkeypatch, nox_session, tmp_path): + @pytest.mark.parametrize( + "nox_session_runner_posargs", [["vulnerabilities.json"]], indirect=True + ) + def test_writes_report_when_path_is_provided( + monkeypatch, nox_session, tmp_path, nox_session_runner_posargs + ): delegate = Mock(return_value="[]") monkeypatch.setattr( _dependencies.DependencyUpdater, @@ -28,7 +36,6 @@ def test_writes_report_when_path_is_set(monkeypatch, nox_session, tmp_path): delegate, ) report_path = tmp_path / "vulnerabilities.json" - nox_session.env["VULNERABILITIES_UPDATE_REPORT_PATH"] = str(report_path) _dependencies.update_vulnerabilities(nox_session) @@ -45,9 +52,8 @@ def test_does_not_write_report_when_path_is_unset( "update_vulnerable_dependencies", delegate, ) - write_text = Mock() - monkeypatch.setattr(tmp_path.__class__, "write_text", write_text, raising=False) + monkeypatch.setattr(Path, "write_text", write_text, raising=False) _dependencies.update_vulnerabilities(nox_session) From 82d2ecda255cd11046b030976c0106f8e94a6b53 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 13:43:23 +0200 Subject: [PATCH 14/21] Apply reviewer fix for whitespace --- doc/changes/unreleased.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/doc/changes/unreleased.md b/doc/changes/unreleased.md index c1832fb48..39fd96704 100644 --- a/doc/changes/unreleased.md +++ b/doc/changes/unreleased.md @@ -4,7 +4,7 @@ This minor release adds automated vulnerability updates through Nox session `vulnerabilities:update` and improves the `dependency-update.yml`. It also includes a -few workflow-related bug fixes and documentation updates. +few workflow-related bug fixes and documentation updates. ## Bug From b00995e6e089d4e2b989c53eaab6994f99163c7b Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Mon, 6 Jul 2026 14:23:46 +0200 Subject: [PATCH 15/21] Move print decision to caller --- exasol/toolbox/nox/_dependencies.py | 13 +++++-- .../util/dependencies/update_dependencies.py | 9 ++--- test/unit/nox/_dependencies_test.py | 36 +++++++++++-------- .../dependencies/update_dependencies_test.py | 8 ++--- 4 files changed, 39 insertions(+), 27 deletions(-) diff --git a/exasol/toolbox/nox/_dependencies.py b/exasol/toolbox/nox/_dependencies.py index 4dc81bf12..e40472788 100644 --- a/exasol/toolbox/nox/_dependencies.py +++ b/exasol/toolbox/nox/_dependencies.py @@ -23,6 +23,14 @@ from noxconfig import PROJECT_CONFIG +def _format_update_vulnerabilities_message(was_updated: bool, report_json: str) -> str: + if not was_updated: + return "No vulnerable dependencies were found." + if report_json == "[]": + return "No vulnerable dependencies remain after updating." + return report_json + + @nox.session(name="dependency:licenses", python=False) def dependency_licenses(session: Session) -> None: """Report licenses for all dependencies.""" @@ -67,11 +75,12 @@ def update_vulnerabilities(session: Session) -> None: try: dependency_updater = DependencyUpdater(root_path=PROJECT_CONFIG.root_path) - report_json = dependency_updater.update_vulnerable_dependencies() + was_updated, report_json = dependency_updater.update_vulnerable_dependencies() except PipAuditException as e: session.error(e.returncode, e.stdout, e.stderr) - if report_json is None or args.report_path is None: + if args.report_path is None: + print(_format_update_vulnerabilities_message(was_updated, report_json)) return report_path = Path(args.report_path) diff --git a/exasol/toolbox/util/dependencies/update_dependencies.py b/exasol/toolbox/util/dependencies/update_dependencies.py index b2e903c25..f08e953f1 100644 --- a/exasol/toolbox/util/dependencies/update_dependencies.py +++ b/exasol/toolbox/util/dependencies/update_dependencies.py @@ -35,21 +35,18 @@ def _run_poetry_update(self) -> None: check=True, ) - def update_vulnerable_dependencies(self) -> str | None: + def update_vulnerable_dependencies(self) -> tuple[bool, str]: """ Check for vulnerable dependencies, and if present, attempt to update dependencies. """ initial_report = self._get_report_json() - print(initial_report) if initial_report == "[]": - return None + return False, initial_report self._run_poetry_update() - post_update_report = self._get_report_json() - print(post_update_report) if Git.has_uncommitted_path_changes((self.poetry_lock_path,)): Git.add((self.poetry_lock_path,)) Git.commit("Updated poetry.lock") - return post_update_report + return True, self._get_report_json() diff --git a/test/unit/nox/_dependencies_test.py b/test/unit/nox/_dependencies_test.py index 34c1cd5a1..631da7060 100644 --- a/test/unit/nox/_dependencies_test.py +++ b/test/unit/nox/_dependencies_test.py @@ -1,4 +1,3 @@ -from pathlib import Path from unittest.mock import Mock import pytest @@ -7,6 +6,21 @@ from exasol.toolbox.util.dependencies.audit import Vulnerabilities +@pytest.mark.parametrize( + ("was_updated", "report_json", "expected"), + [ + (False, "[]", "No vulnerable dependencies were found."), + (True, "[]", "No vulnerable dependencies remain after updating."), + (True, '{"a": 1}', '{"a": 1}'), + ], +) +def test_format_update_vulnerabilities_message(was_updated, report_json, expected): + assert ( + _dependencies._format_update_vulnerabilities_message(was_updated, report_json) + == expected + ) + + def test_audit(monkeypatch, nox_session, sample_vulnerability, capsys): monkeypatch.setattr( _dependencies.Vulnerabilities, @@ -23,19 +37,15 @@ def test_audit(monkeypatch, nox_session, sample_vulnerability, capsys): class TestUpdateVulnerabilities: @staticmethod - @pytest.mark.parametrize( - "nox_session_runner_posargs", [["vulnerabilities.json"]], indirect=True - ) - def test_writes_report_when_path_is_provided( - monkeypatch, nox_session, tmp_path, nox_session_runner_posargs - ): - delegate = Mock(return_value="[]") + def test_writes_report_when_path_is_provided(monkeypatch, nox_session, tmp_path): + delegate = Mock(return_value=(True, "[]")) monkeypatch.setattr( _dependencies.DependencyUpdater, "update_vulnerable_dependencies", delegate, ) report_path = tmp_path / "vulnerabilities.json" + nox_session._runner.posargs = [str(report_path)] _dependencies.update_vulnerabilities(nox_session) @@ -43,19 +53,15 @@ def test_writes_report_when_path_is_provided( assert report_path.read_text() == "[]\n" @staticmethod - def test_does_not_write_report_when_path_is_unset( - monkeypatch, nox_session, tmp_path - ): - delegate = Mock(return_value="[]") + def test_does_not_write_report_when_path_is_unset(monkeypatch, nox_session, capsys): + delegate = Mock(return_value=(False, "[]")) monkeypatch.setattr( _dependencies.DependencyUpdater, "update_vulnerable_dependencies", delegate, ) - write_text = Mock() - monkeypatch.setattr(Path, "write_text", write_text, raising=False) _dependencies.update_vulnerabilities(nox_session) assert delegate.call_count == 1 - write_text.assert_not_called() + assert capsys.readouterr().out == "No vulnerable dependencies were found.\n" diff --git a/test/unit/util/dependencies/update_dependencies_test.py b/test/unit/util/dependencies/update_dependencies_test.py index b5e5c0ed1..f26d69626 100644 --- a/test/unit/util/dependencies/update_dependencies_test.py +++ b/test/unit/util/dependencies/update_dependencies_test.py @@ -44,9 +44,9 @@ def test_when_no_vulnerabilities_exits_early( updater = update_dependencies.DependencyUpdater(root_path=tmp_path) result = updater.update_vulnerable_dependencies() - assert capsys.readouterr().out == "[]\n" + assert capsys.readouterr().out == "" mock_subprocess_run.assert_not_called() - assert result is None + assert result == (False, "[]") @staticmethod def test_when_poetry_lock_is_not_updated( @@ -71,7 +71,7 @@ def test_when_poetry_lock_is_not_updated( ) update_dependencies.Git.add.assert_not_called() update_dependencies.Git.commit.assert_not_called() - assert result == sample_vulnerability.report_json + assert result == (True, sample_vulnerability.report_json) @staticmethod def test_when_poetry_lock_is_updated( @@ -97,4 +97,4 @@ def test_when_poetry_lock_is_updated( ] update_dependencies.Git.add.assert_called_once_with((updater.poetry_lock_path,)) update_dependencies.Git.commit.assert_called_once_with("Updated poetry.lock") - assert result == "[]" + assert result == (True, "[]") From 3af800eb1b38c36625342f30e84a725164c5bed2 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Tue, 7 Jul 2026 09:21:46 +0200 Subject: [PATCH 16/21] Remove task - as CI has workflow:check --- .github/workflows/dependency-update.yml | 3 --- .../toolbox/templates/github/workflows/dependency-update.yml | 3 --- 2 files changed, 6 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index 771519540..319cb91e6 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -98,9 +98,6 @@ jobs: \`\`\`json ${DEPENDENCY_UPDATE_REPORT} \`\`\` - - Please perform the following actions on a locally checked out branch: - - [ ] Execute \`poetry run -- nox -s workflow:generate -- all\` " PR_URL=$(gh pr create \ diff --git a/exasol/toolbox/templates/github/workflows/dependency-update.yml b/exasol/toolbox/templates/github/workflows/dependency-update.yml index 8719d7964..deef1548f 100644 --- a/exasol/toolbox/templates/github/workflows/dependency-update.yml +++ b/exasol/toolbox/templates/github/workflows/dependency-update.yml @@ -97,9 +97,6 @@ jobs: \`\`\`json ${DEPENDENCY_UPDATE_REPORT} \`\`\` - - Please perform the following actions on a locally checked out branch: - - [ ] Execute \`poetry run -- nox -s workflow:generate -- all\` " PR_URL=$(gh pr create \ From 6becaa02d731acba6b60919133aaed979d981812 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Tue, 7 Jul 2026 09:34:15 +0200 Subject: [PATCH 17/21] Ensure created file is in the root_path to prevent other files from being modified --- exasol/toolbox/nox/_dependencies.py | 11 +++++---- exasol/toolbox/nox/_shared.py | 16 +++++++++++++ test/unit/nox/_dependencies_test.py | 13 ++++++++--- test/unit/nox/_shared_test.py | 36 +++++++++++++++++++++++++++++ 4 files changed, 69 insertions(+), 7 deletions(-) diff --git a/exasol/toolbox/nox/_dependencies.py b/exasol/toolbox/nox/_dependencies.py index e40472788..8948814c1 100644 --- a/exasol/toolbox/nox/_dependencies.py +++ b/exasol/toolbox/nox/_dependencies.py @@ -7,6 +7,7 @@ import nox from nox import Session +from exasol.toolbox.nox._shared import validate_path_within_root from exasol.toolbox.util.dependencies.audit import ( PipAuditException, Vulnerabilities, @@ -67,9 +68,9 @@ def update_vulnerabilities(session: Session) -> None: description="Update vulnerable dependencies and optionally write a report file.", ) parser.add_argument( - "report_path", + "report_filename", nargs="?", - help="Optional path for the JSON report of remaining vulnerabilities.", + help="Optional filename for the JSON report of remaining vulnerabilities.", ) args = parser.parse_args(session.posargs) @@ -79,11 +80,13 @@ def update_vulnerabilities(session: Session) -> None: except PipAuditException as e: session.error(e.returncode, e.stdout, e.stderr) - if args.report_path is None: + if args.report_filename is None: print(_format_update_vulnerabilities_message(was_updated, report_json)) return - report_path = Path(args.report_path) + report_path = validate_path_within_root( + PROJECT_CONFIG.root_path / args.report_filename + ) report_path.parent.mkdir(parents=True, exist_ok=True) report_path.write_text(report_json + "\n", encoding="utf-8") diff --git a/exasol/toolbox/nox/_shared.py b/exasol/toolbox/nox/_shared.py index 7b3319a07..c897e990d 100644 --- a/exasol/toolbox/nox/_shared.py +++ b/exasol/toolbox/nox/_shared.py @@ -39,6 +39,22 @@ def exclude(path: Path): return [f"{path}" for path in files if not exclude(path)] +def validate_path_within_root(path: Path) -> Path: + """ + Resolve a path and ensure its parent directory stays inside the project root. + """ + resolved_path = path.resolve(strict=False) + resolved_root = PROJECT_CONFIG.root_path.resolve(strict=False) + + if not resolved_path.parent.is_relative_to(resolved_root): + raise ValueError( + f"path must be located inside the project root: {resolved_root}. " + f"Got: {resolved_path}" + ) + + return resolved_path + + def _context_parser() -> argparse.ArgumentParser: parser = argparse.ArgumentParser( formatter_class=argparse.ArgumentDefaultsHelpFormatter diff --git a/test/unit/nox/_dependencies_test.py b/test/unit/nox/_dependencies_test.py index 631da7060..2980902d4 100644 --- a/test/unit/nox/_dependencies_test.py +++ b/test/unit/nox/_dependencies_test.py @@ -3,6 +3,7 @@ import pytest from exasol.toolbox.nox import _dependencies +from exasol.toolbox.nox import _shared as nox_shared from exasol.toolbox.util.dependencies.audit import Vulnerabilities @@ -37,16 +38,22 @@ def test_audit(monkeypatch, nox_session, sample_vulnerability, capsys): class TestUpdateVulnerabilities: @staticmethod - def test_writes_report_when_path_is_provided(monkeypatch, nox_session, tmp_path): + def test_writes_report_when_path_is_provided( + monkeypatch, nox_session, tmp_path, test_project_config_factory + ): delegate = Mock(return_value=(True, "[]")) + project_config = test_project_config_factory() monkeypatch.setattr( _dependencies.DependencyUpdater, "update_vulnerable_dependencies", delegate, ) - report_path = tmp_path / "vulnerabilities.json" - nox_session._runner.posargs = [str(report_path)] + report_filename = "vulnerabilities.json" + report_path = tmp_path / report_filename + nox_session._runner.posargs = [report_filename] + monkeypatch.setattr(_dependencies, "PROJECT_CONFIG", project_config) + monkeypatch.setattr(nox_shared, "PROJECT_CONFIG", project_config) _dependencies.update_vulnerabilities(nox_session) assert delegate.call_count == 1 diff --git a/test/unit/nox/_shared_test.py b/test/unit/nox/_shared_test.py index 55083fc6d..fe1c17faa 100644 --- a/test/unit/nox/_shared_test.py +++ b/test/unit/nox/_shared_test.py @@ -7,6 +7,7 @@ _integration_test_context, _unit_test_context, get_filtered_python_files, + validate_path_within_root, ) @@ -125,3 +126,38 @@ def test_integration_test_context_uses_minimum_exasol_version( assert context["coverage"] is False assert context["db_version"] == "8.29.13" + + +class TestValidatePathWithinRoot: + @staticmethod + @pytest.mark.parametrize( + "candidate_path", + [ + Path("reports/vulnerabilities.json"), + Path("reports/subdir/output.json"), + ], + ) + def test_accepts_paths_inside_root(test_project_config_factory, candidate_path): + config = test_project_config_factory() + + with patch("exasol.toolbox.nox._shared.PROJECT_CONFIG", config): + actual = validate_path_within_root(config.root_path / candidate_path) + + assert actual == (config.root_path / candidate_path).resolve(strict=False) + + @staticmethod + @pytest.mark.parametrize( + "candidate_path", + [ + Path("../vulnerabilities.json"), + Path(".."), + ], + ) + def test_rejects_paths_outside_root(test_project_config_factory, candidate_path): + config = test_project_config_factory() + + with patch("exasol.toolbox.nox._shared.PROJECT_CONFIG", config): + with pytest.raises( + ValueError, match="path must be located inside the project root" + ): + validate_path_within_root(config.root_path / candidate_path) From 7a9813de9915e86ccfa80e51242751cacd5d5579 Mon Sep 17 00:00:00 2001 From: Ariel Schulz Date: Tue, 7 Jul 2026 09:38:24 +0200 Subject: [PATCH 18/21] Remove branch guard --- .github/workflows/dependency-update.yml | 9 --------- 1 file changed, 9 deletions(-) diff --git a/.github/workflows/dependency-update.yml b/.github/workflows/dependency-update.yml index 319cb91e6..734ac9848 100644 --- a/.github/workflows/dependency-update.yml +++ b/.github/workflows/dependency-update.yml @@ -24,15 +24,6 @@ jobs: persist-credentials: true fetch-depth: 0 - - name: Fail if not running on the default branch - id: check-branch - if: github.ref != format('refs/heads/{0}', github.event.repository.default_branch) - env: - CURRENT_BRANCH: ${{ github.ref }} - run: | - echo "Not running on the default branch. 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= "d5b9f6c384f458a52c76f52f52bebe200e6220ddcb7356e7d1eb6fe8022f5162" +content-hash = "a0c2776376a043679e656b301d640e4b13835be4910ee122da54fd8ef37ed85f" diff --git a/pyproject.toml b/pyproject.toml index 5e597ce38..88f120e1d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -45,7 +45,7 @@ dependencies = [ "pydantic>=2.11.5,<3", "pylint>=2.15.4", "pysonar>=1.0.1.1548,<2", - "pytest>=7.2.2,<9", + "pytest>=7.2.2,<10", "pyupgrade>=2.38.2,<4.0.0", "ruamel-yaml (>=0.18.0,<=0.18.16)", "ruff>=0.14.5,<0.15",