Skip to content

Commit a8cd1ef

Browse files
committed
Sync with the source at c9c63c0
1 parent 07172bf commit a8cd1ef

40 files changed

+611
-1342
lines changed

.buildinfo

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
11
# Sphinx build info version 1
22
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
3-
config: f73060bf67b0b77e79ca59a9f3fa018f
3+
config: c17813fcf071fb533e206267f2a161fc
44
tags: 645f666f9bcd5a90fca523b33c5a78b7

NSFnugget.html

Lines changed: 15 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -3,8 +3,7 @@
33

44
<html xmlns="http://www.w3.org/1999/xhtml">
55
<head>
6-
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
7-
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
6+
<meta charset="utf-8" />
87
<title>Enabling new science in nanoscale structure characterization of complex materials &#8212; DiffPy documentation</title>
98
<link rel="stylesheet" href="_static/bootstrap-sphinx.css" type="text/css" />
109
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
@@ -13,10 +12,6 @@
1312
<script type="text/javascript" src="_static/underscore.js"></script>
1413
<script type="text/javascript" src="_static/doctools.js"></script>
1514
<script type="text/javascript" src="_static/language_data.js"></script>
16-
<script type="text/javascript" src="_static/js/jquery-1.11.0.min.js"></script>
17-
<script type="text/javascript" src="_static/js/jquery-fix.js"></script>
18-
<script type="text/javascript" src="_static/bootstrap-3.3.7/js/bootstrap.min.js"></script>
19-
<script type="text/javascript" src="_static/bootstrap-sphinx.js"></script>
2015
<link rel="shortcut icon" href="_static/diffpy_logo_header.ico"/>
2116
<link rel="search" title="Search" href="search.html" />
2217
<link rel="next" title="Acknowledgements" href="acknowledgements.html" />
@@ -25,6 +20,10 @@
2520
<meta http-equiv='X-UA-Compatible' content='IE=edge,chrome=1'>
2621
<meta name='viewport' content='width=device-width, initial-scale=1.0, maximum-scale=1'>
2722
<meta name="apple-mobile-web-app-capable" content="yes">
23+
<script type="text/javascript" src="_static/js/jquery-1.11.0.min.js "></script>
24+
<script type="text/javascript" src="_static/js/jquery-fix.js "></script>
25+
<script type="text/javascript" src="_static/bootstrap-3.3.7/js/bootstrap.min.js "></script>
26+
<script type="text/javascript" src="_static/bootstrap-sphinx.js "></script>
2827

2928
</head><body>
3029

@@ -91,7 +90,7 @@
9190

9291
<div class="container">
9392
<div class="row">
94-
<div class="col-md-12 content">
93+
<div class="body col-md-12 content" role="main">
9594

9695
<div class="section" id="enabling-new-science-in-nanoscale-structure-characterization-of-complex-materials">
9796
<h1>Enabling new science in nanoscale structure characterization of complex materials<a class="headerlink" href="#enabling-new-science-in-nanoscale-structure-characterization-of-complex-materials" title="Permalink to this headline"></a></h1>
@@ -108,7 +107,7 @@ <h1>Enabling new science in nanoscale structure characterization of complex mate
108107
neutron diffraction.</p>
109108
<div class="figure align-center" id="id3">
110109
<a class="reference internal image-reference" href="_images/PDFgui_screenshot_707.png"><img alt="_images/PDFgui_screenshot_707.png" src="_images/PDFgui_screenshot_707.png" style="width: 399.5px; height: 294.5px;" /></a>
111-
<p class="caption"><span class="caption-text">Screen-shot of PDFgui during a refinement of multiple data-sets</span></p>
110+
<p class="caption"><span class="caption-text">Screen-shot of PDFgui during a refinement of multiple data-sets</span><a class="headerlink" href="#id3" title="Permalink to this image"></a></p>
112111
</div>
113112
<p>The diffraction data are Fourier transformed to obtain the atomic pair distribution
114113
function (PDF) and analyzed by quantitatively fitting nanostructure models to the
@@ -118,20 +117,19 @@ <h1>Enabling new science in nanoscale structure characterization of complex mate
118117
refinements similar to those shown, allowing researchers to make scientific
119118
discoveries during data collection, at the beam-time, and not a-posteriori after
120119
the beamtime is over. PDFgui has numerous extensions
121-
that are described in more detail in <a class="footnote-reference" href="#id2" id="id1">[1]</a>. The beta version of PDFgui
120+
that are described in more detail in <a class="footnote-reference brackets" href="#id2" id="id1">1</a>. The beta version of PDFgui
122121
is now in public release, available for Windows, Linux and Mac OSX platforms,
123122
and in the first month has been downloaded 220 times. More information can be
124123
found at <a class="reference external" href="http://www.diffpy.org">http://www.diffpy.org</a>.</p>
125-
<table class="docutils footnote" frame="void" id="id2" rules="none">
126-
<colgroup><col class="label" /><col /></colgroup>
127-
<tbody valign="top">
128-
<tr><td class="label"><a class="fn-backref" href="#id1">[1]</a></td><td>C. L. Farrow, P. Juhás, J. W. Liu, D. Bryndin, E. S. Božin, J. Bloch,
124+
<dl class="footnote brackets">
125+
<dt class="label" id="id2"><span class="brackets"><a class="fn-backref" href="#id1">1</a></span></dt>
126+
<dd><p>C. L. Farrow, P. Juhás, J. W. Liu, D. Bryndin, E. S. Božin, J. Bloch,
129127
Th. Proffen and S. J. L. Billinge, <a class="reference external" href="http://iopscience.iop.org/0953-8984/19/33/335219/">PDFfit2 and PDFgui: computer
130128
programs for studying nanostructure in crystals</a>,
131-
<em>J.&nbsp;Phys.: Condens. Mat.</em> <strong>19</strong>, 335219 (2007)
132-
<a class="reference external" href="doc/pdfgui/Farrow-jpcm-2007.pdf"><img alt="downloadFarrowJpcm07" src="_images/pdficon_small.png" /></a></td></tr>
133-
</tbody>
134-
</table>
129+
<em>J. Phys.: Condens. Mat.</em> <strong>19</strong>, 335219 (2007)
130+
<a class="reference external" href="doc/pdfgui/Farrow-jpcm-2007.pdf"><img alt="downloadFarrowJpcm07" src="_images/pdficon_small.png" /></a></p>
131+
</dd>
132+
</dl>
135133
</div>
136134

137135

_static/ajax-loader.gif

-673 Bytes
Binary file not shown.

_static/basic.css

Lines changed: 88 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -231,6 +231,16 @@ a.headerlink {
231231
visibility: hidden;
232232
}
233233

234+
a.brackets:before,
235+
span.brackets > a:before{
236+
content: "[";
237+
}
238+
239+
a.brackets:after,
240+
span.brackets > a:after {
241+
content: "]";
242+
}
243+
234244
h1:hover > a.headerlink,
235245
h2:hover > a.headerlink,
236246
h3:hover > a.headerlink,
@@ -279,6 +289,12 @@ img.align-center, .figure.align-center, object.align-center {
279289
margin-right: auto;
280290
}
281291

292+
img.align-default, .figure.align-default {
293+
display: block;
294+
margin-left: auto;
295+
margin-right: auto;
296+
}
297+
282298
.align-left {
283299
text-align: left;
284300
}
@@ -287,6 +303,10 @@ img.align-center, .figure.align-center, object.align-center {
287303
text-align: center;
288304
}
289305

306+
.align-default {
307+
text-align: center;
308+
}
309+
290310
.align-right {
291311
text-align: right;
292312
}
@@ -358,6 +378,11 @@ table.align-center {
358378
margin-right: auto;
359379
}
360380

381+
table.align-default {
382+
margin-left: auto;
383+
margin-right: auto;
384+
}
385+
361386
table caption span.caption-number {
362387
font-style: italic;
363388
}
@@ -391,6 +416,16 @@ table.citation td {
391416
border-bottom: none;
392417
}
393418

419+
th > p:first-child,
420+
td > p:first-child {
421+
margin-top: 0px;
422+
}
423+
424+
th > p:last-child,
425+
td > p:last-child {
426+
margin-bottom: 0px;
427+
}
428+
394429
/* -- figures --------------------------------------------------------------- */
395430

396431
div.figure {
@@ -460,11 +495,57 @@ ol.upperroman {
460495
list-style: upper-roman;
461496
}
462497

498+
li > p:first-child {
499+
margin-top: 0px;
500+
}
501+
502+
li > p:last-child {
503+
margin-bottom: 0px;
504+
}
505+
506+
dl.footnote > dt,
507+
dl.citation > dt {
508+
float: left;
509+
}
510+
511+
dl.footnote > dd,
512+
dl.citation > dd {
513+
margin-bottom: 0em;
514+
}
515+
516+
dl.footnote > dd:after,
517+
dl.citation > dd:after {
518+
content: "";
519+
clear: both;
520+
}
521+
522+
dl.field-list {
523+
display: flex;
524+
flex-wrap: wrap;
525+
}
526+
527+
dl.field-list > dt {
528+
flex-basis: 20%;
529+
font-weight: bold;
530+
word-break: break-word;
531+
}
532+
533+
dl.field-list > dt:after {
534+
content: ":";
535+
}
536+
537+
dl.field-list > dd {
538+
flex-basis: 70%;
539+
padding-left: 1em;
540+
margin-left: 0em;
541+
margin-bottom: 0em;
542+
}
543+
463544
dl {
464545
margin-bottom: 15px;
465546
}
466547

467-
dd p {
548+
dd > p:first-child {
468549
margin-top: 0px;
469550
}
470551

@@ -537,6 +618,12 @@ dl.glossary dt {
537618
font-style: oblique;
538619
}
539620

621+
.classifier:before {
622+
font-style: normal;
623+
margin: 0.5em;
624+
content: ":";
625+
}
626+
540627
abbr, acronym {
541628
border-bottom: dotted 1px;
542629
cursor: help;

_static/comment-bright.png

-756 Bytes
Binary file not shown.

_static/comment-close.png

-829 Bytes
Binary file not shown.

_static/comment.png

-641 Bytes
Binary file not shown.

_static/diffpy-styles.css

Lines changed: 1 addition & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -1,5 +1 @@
1-
/* Turn off italics for internal references */
2-
3-
a.reference.internal em {
4-
font-style: normal;
5-
}
1+
/* Add CSS style overrides here */

_static/doctools.js

Lines changed: 2 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -87,14 +87,13 @@ jQuery.fn.highlightText = function(text, className) {
8787
node.nextSibling));
8888
node.nodeValue = val.substr(0, pos);
8989
if (isInSVG) {
90-
var bbox = span.getBBox();
9190
var rect = document.createElementNS("http://www.w3.org/2000/svg", "rect");
92-
rect.x.baseVal.value = bbox.x;
91+
var bbox = node.parentElement.getBBox();
92+
rect.x.baseVal.value = bbox.x;
9393
rect.y.baseVal.value = bbox.y;
9494
rect.width.baseVal.value = bbox.width;
9595
rect.height.baseVal.value = bbox.height;
9696
rect.setAttribute('class', className);
97-
var parentOfText = node.parentNode.parentNode;
9897
addItems.push({
9998
"parent": node.parentNode,
10099
"target": rect});

_static/documentation_options.js

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -6,5 +6,5 @@ var DOCUMENTATION_OPTIONS = {
66
FILE_SUFFIX: '.html',
77
HAS_SOURCE: false,
88
SOURCELINK_SUFFIX: '.txt',
9-
NAVIGATION_WITH_KEYS: false,
9+
NAVIGATION_WITH_KEYS: false
1010
};

0 commit comments

Comments
 (0)