vsclust/NAMESPACE at master · computproteomics/vsclust · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(print,fclust)
export(ClustComp)
export(PrepareForVSClust)
export(PrepareSEForVSClust)
export(SignAnalysis)
export(SignAnalysisPaired)
export(SwitchOrder)
export(averageCond)
export(calcBHI)
export(cvalidate.xiebeni)
export(determine_fuzz)
export(enrichSTRING_API)
export(estimClust.plot)
export(estimClustNum)
export(mfuzz.plot)
export(optimalClustNum)
export(pcaWithVar)
export(runClustWrapper)
export(runFuncEnrich)
export(runVSClustApp)
export(vsclust_algorithm)
import(DOSE)
import(grDevices)
import(graphics)
import(httr)
import(limma)
import(parallel)
import(stats)
importFrom(MultiAssayExperiment,assay)
importFrom(MultiAssayExperiment,assays)
importFrom(MultiAssayExperiment,colData)
importFrom(MultiAssayExperiment,sampleMap)
importFrom(clusterProfiler,compareCluster)
importFrom(grDevices,rainbow)
importFrom(grDevices,recordPlot)
importFrom(matrixStats,rowMaxs)
importFrom(matrixStats,rowSds)
importFrom(qvalue,qvalue)
importFrom(shiny,getDefaultReactiveDomain)
importFrom(shiny,incProgress)
importFrom(shiny,isRunning)
importFrom(shiny,need)
importFrom(shiny,validate)
useDynLib(vsclust, .registration = TRUE)