Python package

test: add missing tests for get_filenames_in_commit with git_reference #3453

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Run time

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Job	Run time
detect_changes	6s
python-check (3.13, windows-latest)	34s
python-check (3.10, macos-latest)	31s
python-check (3.11, windows-latest)	33s
python-check (3.11, ubuntu-22.04)	32s
python-check (3.12, ubuntu-22.04)	32s
python-check (3.14, macos-latest)	43s
python-check (3.12, windows-latest)	34s
python-check (3.10, windows-latest)	35s
python-check (3.10, ubuntu-22.04)	27s
python-check (3.13, ubuntu-22.04)	31s
python-check (3.12, macos-latest)	46s
python-check (3.14, ubuntu-22.04)	29s
python-check (3.14, windows-latest)	33s
python-check (3.13, macos-latest)	34s
python-check (3.11, macos-latest)	43s
	8m 43s