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Remove parameters not needed #650

@ypriverol

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@ypriverol

Description of feature

The following parameters are not really needed because they are in the SDRF:

  • acquisition_method
  • labelling_type ?
  • enzyme
  • fragment_mass_tolerance
  • fragment_mass_tolerance_unit
  • precursor_mass_tolerance
  • precursor_mass_tolerance_unit
  • fixed_mods
  • variable_mods

@daichengxin @jpfeuffer @timosachsenberg As SDRF becomes easier and more common to annotate, all these parameters can be inferred from the SDRF. I myself have never used any of them. Can you think in others @daichengxin @jpfeuffer. I think we can remove them for the next release. Making sure that they are not present, we throw an error that they need to be specified in the SDRF.

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