From 3b6c2187772049a573b7f949d9cd26bc41793c6a Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Tue, 17 Feb 2026 10:28:18 +0000 Subject: [PATCH 01/10] Added contact for PRJNA670487: Sylvain Raffaele --- .../contacts/allContacts.xml | 24 +++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 8f7e022c..4c4d8324 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -15,6 +15,30 @@ + + sylvain.raffaele + Sylvain Raffaele + LIPME, INRAE, CNRS + sylvain.raffaele@inrae.fr +
28 chemin de borde rouge
+ Castanet tolosan + + 31320 + France + + + + stefan.kusch + Stefan Kusch + Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University + +
+ Aachen + + + Germany + + d.perets D. Perets From 204724425befa576f9627ceaf0de7080228d71ef Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Tue, 17 Feb 2026 11:55:12 +0000 Subject: [PATCH 02/10] Removed (First author) contact from allContacts.xml - Contact not referenced in PRJNA670487 presenter - Maintaining only sylvain.raffaele for this dataset --- .../xml/datasetPresenters/contacts/allContacts.xml | 11 ----------- 1 file changed, 11 deletions(-) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 4c4d8324..15b23841 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -27,17 +27,6 @@ France - - stefan.kusch - Stefan Kusch - Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University - -
- Aachen - - - Germany - d.perets From e3fbed4a0910cae3078597e189fd0da8a1fbec69 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Thu, 26 Feb 2026 14:44:37 +0000 Subject: [PATCH 03/10] Updated contact for PRJNA670487: Sylvain Raffaele --- Model/lib/xml/datasetPresenters/contacts/allContacts.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 15b23841..4d48ab13 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -18,9 +18,9 @@ sylvain.raffaele Sylvain Raffaele - LIPME, INRAE, CNRS + Laboratoire des Interactions Plantes Microorganismes Environnement (LIPME), INRAE, CNRS, Castanet Tolosan Cedex, France sylvain.raffaele@inrae.fr -
28 chemin de borde rouge
+
Castanet tolosan 31320 From 16495ff43932af3f72aa19e4c5ad230f13dc6d5e Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Fri, 6 Mar 2026 10:35:07 +0000 Subject: [PATCH 04/10] Add Silvia Restrepo contact for PRJNA323849 (FungiDB Rel. 71) --- .../contacts/allContacts.xml | 60 +++++++++++++++++++ 1 file changed, 60 insertions(+) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 4d48ab13..06335f9d 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -40774,4 +40774,64 @@ Academy of Sciences + + c.ruiz-roldan + Carmen Ruiz-Roldán + Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3) + ge2rurom@uco.es +
+ Córdoba + + E-14071 + Spain + + + + y.pareja-jaime + Yolanda Pareja-Jaime + Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3) + +
+ Córdoba + + E-14071 + Spain + + + + ja.gonzalez-reyes + José Antonio González-Reyes + Departamento de Biología Celular, Fisiología e Inmunología, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3) + +
+ Córdoba + + E-14071 + Spain + + + + mi.roncero + M. Isabel G. Roncero + Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3) + +
+ Córdoba + + E-14071 + Spain + + + + silvia.restrepo + Silvia Restrepo + Universidad de los Andes + srestrep@uniandes.edu.co +
+ Bogotá + + + Colombia + + From bd6a02517bf6e2d7fc268e456024272119f0acf9 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Thu, 19 Mar 2026 11:56:32 +0000 Subject: [PATCH 05/10] Add contacts for Alternaria brassicicola PRJNA156709 RNA-seq dataset. Added yangrae.cho (Yangrae Cho, University of Hawaii at Manoa) and akhil.srivastava (Akhil Srivastava, University of Hawaii at Manoa) to allContacts.xml. --- .../contacts/allContacts.xml | 24 +++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 06335f9d..79e70f86 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -40834,4 +40834,28 @@ Academy of Sciences Colombia + + yangrae.cho + Yangrae Cho + University of Hawaii at Manoa + yangrae@hawaii.edu +
+ Honolulu + Hawaii + + USA + + + + akhil.srivastava + Akhil Srivastava + University of Hawaii at Manoa + +
+ Honolulu + Hawaii + + USA + + From cc6bdbaed90aa57644137625fa1905ee66838669 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Mon, 23 Mar 2026 13:33:18 +0000 Subject: [PATCH 06/10] Add contacts for Blumeria graminis f.sp. hordei (PRJEB3069) RNA-seq dataset. - Added Pietro D. Spanu, Department of Life Sciences, Imperial College London, p.spanu@imperial.ac.uk to allContacts.xml. - Publications (PMCID): 21148392 --- .../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++ 1 file changed, 12 insertions(+) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 79e70f86..48acb993 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -40858,4 +40858,16 @@ Academy of Sciences USA + + pietro.spanu + Pietro D. Spanu + Department of Life Sciences, Imperial College London + p.spanu@imperial.ac.uk +
+ London + + + UK + + From 389823b50fe1fd38ab2eff76bde13ff503eef123 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Mon, 23 Mar 2026 14:44:11 +0000 Subject: [PATCH 07/10] Add contacts for Blumeria graminis isolates (PRJNA296894) RNA-seq dataset. - Added contact fabrizio.menardo for PRJNA296894 Fabrizio Menardo, Department of Plant and Microbial Biology, University of Zurich fabrizio.menardo@uzh.ch - Added Pietro D. Spanu, Department of Life Sciences, Imperial College London, p.spanu@imperial.ac.uk to allContacts.xml. - Publications (PMCID): 29441081, 26752267 --- .../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++ 1 file changed, 12 insertions(+) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 48acb993..2890455f 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -40870,4 +40870,16 @@ Academy of Sciences UK + + fabrizio.menardo + Fabrizio Menardo + Department of Plant and Microbial Biology, University of Zurich + fabrizio.menardo@uzh.ch +
+ Zurich + + + Switzerland + + From 5a447a8c3f85868941a91f645dbc1af5ec3a5ca5 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Tue, 24 Mar 2026 11:08:40 +0000 Subject: [PATCH 08/10] Add contacts for Blumeria graminis isolates (PRJNA427159) host specialization RNA-seq dataset. - Added contact Beat Keller (bkeller@botinst.uzh.ch) for PRJNA427159, Department of Plant and Microbial Biology, University of Zurich - Publications (PMCID): 29441081, 26752267 --- .../contacts/allContacts.xml | 42 +++++++++++++++++-- 1 file changed, 39 insertions(+), 3 deletions(-) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 2890455f..040f4d3f 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -3022,10 +3022,10 @@ Bentley, Perth, Western Australia 6102, Australia Department of Plant and Microbial Biology, University of Zurich, Switzerland bkeller@botinst.uzh.ch
- + Zurich - - + 8008 + Switzerland @@ -40882,4 +40882,40 @@ Academy of Sciences Switzerland + + coraline.praz + Coraline R. Praz + Department of Plant and Microbial Biology, University of Zürich + coraline.praz@botinst.uzh.ch +
+ Zurich + + + Switzerland + + + + salim.bourras + Salim Bourras + Department of Plant and Microbial Biology, University of Zürich + +
+ Zurich + + + Switzerland + + + + marion.muller + Marion C. Müller + Department of Plant and Microbial Biology, University of Zürich + +
+ Zurich + + + Switzerland + + From 8909aa5ba636a67a56d1a332c0a9839f7bf3a2cd Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Wed, 25 Mar 2026 14:49:27 +0000 Subject: [PATCH 09/10] Add HAAS contact for PRJNA1031822 RNA-seq dataset. - Contact: Hubei Academy of Agricultural Sciences (HAAS) - Used for: B. graminis f. sp. tritici infection time course RNA-seq dataset --- .../datasetPresenters/contacts/allContacts.xml | 16 +++++++++++----- 1 file changed, 11 insertions(+), 5 deletions(-) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 040f4d3f..7a33f28b 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -1,17 +1,19 @@ - - - - - +<<<<<<< Updated upstream TODO Please add Contact Info PlaceHolder +======= + haas + Hubei Academy of Agricultural Sciences (HAAS) + Hubei Academy of Agricultural Sciences (HAAS) +>>>>>>> Stashed changes
+<<<<<<< Updated upstream @@ -40918,4 +40920,8 @@ Academy of Sciences Switzerland +======= + China + +>>>>>>> Stashed changes From d68008f44c66d01d3a5cce66214c487411beefe6 Mon Sep 17 00:00:00 2001 From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com> Date: Thu, 26 Mar 2026 17:04:55 +0000 Subject: [PATCH 10/10] Add contacts for Botrytis cinerea (PRJNA896582) RNA-seq dataset. - Added contact Xiaoyi Shan (shanxy80@tsinghua.edu.cn) for PRJNA896582 - Publications (PMCID): 41022737 --- .../datasetPresenters/contacts/allContacts.xml | 18 +++++++++++------- 1 file changed, 11 insertions(+), 7 deletions(-) diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml index 7a33f28b..b8c69c0e 100644 --- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml +++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml @@ -3,11 +3,6 @@ TODO Please add Contact Info PlaceHolder -======= - haas - Hubei Academy of Agricultural Sciences (HAAS) - Hubei Academy of Agricultural Sciences (HAAS) ->>>>>>> Stashed changes
@@ -40920,8 +40915,17 @@ Academy of Sciences Switzerland -======= + + + xiaoyi.shan + Xiaoyi Shan + Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences + +
+ Shanghai + + China ->>>>>>> Stashed changes +