From 3b6c2187772049a573b7f949d9cd26bc41793c6a Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 10:28:18 +0000
Subject: [PATCH 1/7] Added contact for PRJNA670487: Sylvain Raffaele
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 8f7e022c..4c4d8324 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -15,6 +15,30 @@
+
+ sylvain.raffaele
+ Sylvain Raffaele
+ LIPME, INRAE, CNRS
+ sylvain.raffaele@inrae.fr
+ 28 chemin de borde rouge
+ Castanet tolosan
+
+ 31320
+ France
+
+
+
+ stefan.kusch
+ Stefan Kusch
+ Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
+
+
+ Aachen
+
+
+ Germany
+
+
d.perets
D. Perets
From 204724425befa576f9627ceaf0de7080228d71ef Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 11:55:12 +0000
Subject: [PATCH 2/7] Removed (First author) contact from allContacts.xml -
Contact not referenced in PRJNA670487 presenter - Maintaining only
sylvain.raffaele for this dataset
---
.../xml/datasetPresenters/contacts/allContacts.xml | 11 -----------
1 file changed, 11 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4c4d8324..15b23841 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -27,17 +27,6 @@
France
-
- stefan.kusch
- Stefan Kusch
- Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
-
-
- Aachen
-
-
- Germany
-
d.perets
From e3fbed4a0910cae3078597e189fd0da8a1fbec69 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 26 Feb 2026 14:44:37 +0000
Subject: [PATCH 3/7] Updated contact for PRJNA670487: Sylvain Raffaele
---
Model/lib/xml/datasetPresenters/contacts/allContacts.xml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 15b23841..4d48ab13 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -18,9 +18,9 @@
sylvain.raffaele
Sylvain Raffaele
- LIPME, INRAE, CNRS
+ Laboratoire des Interactions Plantes Microorganismes Environnement (LIPME), INRAE, CNRS, Castanet Tolosan Cedex, France
sylvain.raffaele@inrae.fr
- 28 chemin de borde rouge
+
Castanet tolosan
31320
From 16495ff43932af3f72aa19e4c5ad230f13dc6d5e Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Fri, 6 Mar 2026 10:35:07 +0000
Subject: [PATCH 4/7] Add Silvia Restrepo contact for PRJNA323849 (FungiDB Rel.
71)
---
.../contacts/allContacts.xml | 60 +++++++++++++++++++
1 file changed, 60 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4d48ab13..06335f9d 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40774,4 +40774,64 @@ Academy of Sciences
+
+ c.ruiz-roldan
+ Carmen Ruiz-Roldán
+ Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3)
+ ge2rurom@uco.es
+
+ Córdoba
+
+ E-14071
+ Spain
+
+
+
+ y.pareja-jaime
+ Yolanda Pareja-Jaime
+ Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3)
+
+
+ Córdoba
+
+ E-14071
+ Spain
+
+
+
+ ja.gonzalez-reyes
+ José Antonio González-Reyes
+ Departamento de Biología Celular, Fisiología e Inmunología, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3)
+
+
+ Córdoba
+
+ E-14071
+ Spain
+
+
+
+ mi.roncero
+ M. Isabel G. Roncero
+ Departamento de Genética, Universidad de Córdoba, Campus de Excelencia Agroalimentario (ceiA3)
+
+
+ Córdoba
+
+ E-14071
+ Spain
+
+
+
+ silvia.restrepo
+ Silvia Restrepo
+ Universidad de los Andes
+ srestrep@uniandes.edu.co
+
+ Bogotá
+
+
+ Colombia
+
+
From bd6a02517bf6e2d7fc268e456024272119f0acf9 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 19 Mar 2026 11:56:32 +0000
Subject: [PATCH 5/7] Add contacts for Alternaria brassicicola PRJNA156709
RNA-seq dataset. Added yangrae.cho (Yangrae Cho, University of Hawaii at
Manoa) and akhil.srivastava (Akhil Srivastava, University of Hawaii at Manoa)
to allContacts.xml.
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 06335f9d..79e70f86 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40834,4 +40834,28 @@ Academy of Sciences
Colombia
+
+ yangrae.cho
+ Yangrae Cho
+ University of Hawaii at Manoa
+ yangrae@hawaii.edu
+
+ Honolulu
+ Hawaii
+
+ USA
+
+
+
+ akhil.srivastava
+ Akhil Srivastava
+ University of Hawaii at Manoa
+
+
+ Honolulu
+ Hawaii
+
+ USA
+
+
From cc6bdbaed90aa57644137625fa1905ee66838669 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 23 Mar 2026 13:33:18 +0000
Subject: [PATCH 6/7] Add contacts for Blumeria graminis f.sp. hordei
(PRJEB3069) RNA-seq dataset. - Added Pietro D. Spanu, Department of Life
Sciences, Imperial College London, p.spanu@imperial.ac.uk to allContacts.xml.
- Publications (PMCID): 21148392
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 79e70f86..48acb993 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40858,4 +40858,16 @@ Academy of Sciences
USA
+
+ pietro.spanu
+ Pietro D. Spanu
+ Department of Life Sciences, Imperial College London
+ p.spanu@imperial.ac.uk
+
+ London
+
+
+ UK
+
+
From 389823b50fe1fd38ab2eff76bde13ff503eef123 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 23 Mar 2026 14:44:11 +0000
Subject: [PATCH 7/7] Add contacts for Blumeria graminis isolates (PRJNA296894)
RNA-seq dataset. - Added contact fabrizio.menardo for PRJNA296894 Fabrizio
Menardo, Department of Plant and Microbial Biology, University of Zurich
fabrizio.menardo@uzh.ch - Added Pietro D. Spanu, Department of Life Sciences,
Imperial College London, p.spanu@imperial.ac.uk to allContacts.xml. -
Publications (PMCID): 29441081, 26752267
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 48acb993..2890455f 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40870,4 +40870,16 @@ Academy of Sciences
UK
+
+ fabrizio.menardo
+ Fabrizio Menardo
+ Department of Plant and Microbial Biology, University of Zurich
+ fabrizio.menardo@uzh.ch
+
+ Zurich
+
+
+ Switzerland
+
+