From 3b6c2187772049a573b7f949d9cd26bc41793c6a Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 10:28:18 +0000
Subject: [PATCH 1/7] Added contact for PRJNA670487: Sylvain Raffaele
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 8f7e022c..4c4d8324 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -15,6 +15,30 @@
+
+ sylvain.raffaele
+ Sylvain Raffaele
+ LIPME, INRAE, CNRS
+ sylvain.raffaele@inrae.fr
+ 28 chemin de borde rouge
+ Castanet tolosan
+
+ 31320
+ France
+
+
+
+ stefan.kusch
+ Stefan Kusch
+ Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
+
+
+ Aachen
+
+
+ Germany
+
+
d.perets
D. Perets
From 204724425befa576f9627ceaf0de7080228d71ef Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 11:55:12 +0000
Subject: [PATCH 2/7] Removed (First author) contact from allContacts.xml -
Contact not referenced in PRJNA670487 presenter - Maintaining only
sylvain.raffaele for this dataset
---
.../xml/datasetPresenters/contacts/allContacts.xml | 11 -----------
1 file changed, 11 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4c4d8324..15b23841 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -27,17 +27,6 @@
France
-
- stefan.kusch
- Stefan Kusch
- Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
-
-
- Aachen
-
-
- Germany
-
d.perets
From e3fbed4a0910cae3078597e189fd0da8a1fbec69 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 26 Feb 2026 14:44:37 +0000
Subject: [PATCH 3/7] Updated contact for PRJNA670487: Sylvain Raffaele
---
Model/lib/xml/datasetPresenters/contacts/allContacts.xml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 15b23841..4d48ab13 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -18,9 +18,9 @@
sylvain.raffaele
Sylvain Raffaele
- LIPME, INRAE, CNRS
+ Laboratoire des Interactions Plantes Microorganismes Environnement (LIPME), INRAE, CNRS, Castanet Tolosan Cedex, France
sylvain.raffaele@inrae.fr
- 28 chemin de borde rouge
+
Castanet tolosan
31320
From 99015e86f1a2f7594eced710cbf3621b8c9d8549 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 11:30:49 +0100
Subject: [PATCH 4/7] Add contacts for Botrytis cinerea (PRJNA915611) RNA-seq
dataset. - Added contact Xuncheng Wang, 1706380435@pku.edu.cn, Peking
Universit, Beijing, Chin for PRJNA915611
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4d48ab13..0f95be51 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40774,4 +40774,28 @@ Academy of Sciences
+
+ xuncheng.wang
+ Xuncheng Wang
+ Peking University
+ 1706380435@pku.edu.cn
+
+ Beijing
+
+
+ China
+
+
+
+ mei.liu
+ Mei Liu
+ Peking University
+
+
+ Beijing
+
+
+ China
+
+
From e9ae8c9cd5ee99c70c7d81fcfc08b5e1e1dabcad Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 12:32:14 +0100
Subject: [PATCH 5/7] Add Nathalie Poussereau contact for Botrytis cinerea
RNA-seq (PRJNA1104610) dataset. - Dataset: PacC transcription factor
pH-responsive gene regulation study - PMID: 39385086 - Organism: Botrytis
cinerea B05.10 - Added nathalie.poussereau contact to allContacts.xml -
Email: nathalie.poussereau@univ-lyon1.fr
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 0f95be51..ab4b7036 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40798,4 +40798,16 @@ Academy of Sciences
China
+
+ nathalie.poussereau
+ Nathalie Poussereau
+ Université Claude Bernard Lyon 1, INSA Lyon, Bayer SAS, MAP, UMR5240, Villeurbanne, France
+ nathalie.poussereau@univ-lyon1.fr
+
+ Villeurbanne
+
+ 69100
+ France
+
+
From b966aeb02ce2676e7e76239989573c31ff05522a Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 2 Apr 2026 09:57:11 +0100
Subject: [PATCH 6/7] Remove Nathalie Poussereau contact for PRJNA1104610
---
.../xml/datasetPresenters/contacts/allContacts.xml | 11 -----------
1 file changed, 11 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index ab4b7036..745da5e8 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40798,16 +40798,5 @@ Academy of Sciences
China
-
- nathalie.poussereau
- Nathalie Poussereau
- Université Claude Bernard Lyon 1, INSA Lyon, Bayer SAS, MAP, UMR5240, Villeurbanne, France
- nathalie.poussereau@univ-lyon1.fr
-
- Villeurbanne
-
- 69100
- France
-
From 122939566ded6dad4c8d87ed865da112b367f793 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 2 Apr 2026 10:50:20 +0100
Subject: [PATCH 7/7] Add Tsutomu Arie contact for Fusarium oxysporum
(PRJNA662919) RNA-seq dataset. - Dataset: Morphological differentiation
transcriptomics - PMID: 34108627 - Organism: Fusarium oxysporum isolate
Cong:1-1 - Added Tsutomu Arie, arie@cc.tuat.ac.jp, Osaka Prefecture
University, Japan
---
.../xml/datasetPresenters/contacts/allContacts.xml | 11 +++++++++++
1 file changed, 11 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 745da5e8..3890b454 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40798,5 +40798,16 @@ Academy of Sciences
China
+
+ tsutomu.arie
+ Tsutomu Arie
+ Osaka Prefecture University
+
+
+
+
+
+ Japan
+