From 3b6c2187772049a573b7f949d9cd26bc41793c6a Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 10:28:18 +0000
Subject: [PATCH 1/8] Added contact for PRJNA670487: Sylvain Raffaele
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 8f7e022c..4c4d8324 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -15,6 +15,30 @@
+
+ sylvain.raffaele
+ Sylvain Raffaele
+ LIPME, INRAE, CNRS
+ sylvain.raffaele@inrae.fr
+ 28 chemin de borde rouge
+ Castanet tolosan
+
+ 31320
+ France
+
+
+
+ stefan.kusch
+ Stefan Kusch
+ Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
+
+
+ Aachen
+
+
+ Germany
+
+
d.perets
D. Perets
From 204724425befa576f9627ceaf0de7080228d71ef Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Tue, 17 Feb 2026 11:55:12 +0000
Subject: [PATCH 2/8] Removed (First author) contact from allContacts.xml -
Contact not referenced in PRJNA670487 presenter - Maintaining only
sylvain.raffaele for this dataset
---
.../xml/datasetPresenters/contacts/allContacts.xml | 11 -----------
1 file changed, 11 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4c4d8324..15b23841 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -27,17 +27,6 @@
France
-
- stefan.kusch
- Stefan Kusch
- Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University
-
-
- Aachen
-
-
- Germany
-
d.perets
From e3fbed4a0910cae3078597e189fd0da8a1fbec69 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Thu, 26 Feb 2026 14:44:37 +0000
Subject: [PATCH 3/8] Updated contact for PRJNA670487: Sylvain Raffaele
---
Model/lib/xml/datasetPresenters/contacts/allContacts.xml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 15b23841..4d48ab13 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -18,9 +18,9 @@
sylvain.raffaele
Sylvain Raffaele
- LIPME, INRAE, CNRS
+ Laboratoire des Interactions Plantes Microorganismes Environnement (LIPME), INRAE, CNRS, Castanet Tolosan Cedex, France
sylvain.raffaele@inrae.fr
- 28 chemin de borde rouge
+
Castanet tolosan
31320
From 99015e86f1a2f7594eced710cbf3621b8c9d8549 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 11:30:49 +0100
Subject: [PATCH 4/8] Add contacts for Botrytis cinerea (PRJNA915611) RNA-seq
dataset. - Added contact Xuncheng Wang, 1706380435@pku.edu.cn, Peking
Universit, Beijing, Chin for PRJNA915611
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 4d48ab13..0f95be51 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40774,4 +40774,28 @@ Academy of Sciences
+
+ xuncheng.wang
+ Xuncheng Wang
+ Peking University
+ 1706380435@pku.edu.cn
+
+ Beijing
+
+
+ China
+
+
+
+ mei.liu
+ Mei Liu
+ Peking University
+
+
+ Beijing
+
+
+ China
+
+
From e9ae8c9cd5ee99c70c7d81fcfc08b5e1e1dabcad Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 12:32:14 +0100
Subject: [PATCH 5/8] Add Nathalie Poussereau contact for Botrytis cinerea
RNA-seq (PRJNA1104610) dataset. - Dataset: PacC transcription factor
pH-responsive gene regulation study - PMID: 39385086 - Organism: Botrytis
cinerea B05.10 - Added nathalie.poussereau contact to allContacts.xml -
Email: nathalie.poussereau@univ-lyon1.fr
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 0f95be51..ab4b7036 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40798,4 +40798,16 @@ Academy of Sciences
China
+
+ nathalie.poussereau
+ Nathalie Poussereau
+ Université Claude Bernard Lyon 1, INSA Lyon, Bayer SAS, MAP, UMR5240, Villeurbanne, France
+ nathalie.poussereau@univ-lyon1.fr
+
+ Villeurbanne
+
+ 69100
+ France
+
+
From ed530288f87d329508b85e4bb93db1a8a9eb3f4c Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 13:01:28 +0100
Subject: [PATCH 6/8] Add contact for PRJNA1113581 RNA-seq dataset. - Dataset:
Biocontrol transcriptomics against Botrytis cinerea - PMID: 39808607 - Added
mathabatha.setati contact to allContacts.xml - Email: setati@sun.ac.za
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index ab4b7036..831443fd 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40810,4 +40810,16 @@ Academy of Sciences
France
+
+ mathabatha.setati
+ Mathabatha Evodia Setati
+ South African Grape and Wine Research Institute, Stellenbosch University, Stellenbosch, South Africa
+ setati@sun.ac.za
+
+ Stellenbosch
+
+
+ South Africa
+
+
From 90269607891bf54d7b35767acb2c2b582cdf6a99 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Mon, 30 Mar 2026 16:59:33 +0100
Subject: [PATCH 7/8] Add submitting institution contact for PRJNA610974
RNA-seq dataset. - Dataset: Cercospora sojina RNA-seq - Organism: Cercospora
sojina (Race15 and Race1 strains) - Submitting Institution: Northeast
Agricultural University
---
.../xml/datasetPresenters/contacts/allContacts.xml | 12 ++++++++++++
1 file changed, 12 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index 831443fd..dd908035 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -40822,4 +40822,16 @@ Academy of Sciences
South Africa
+
+
+ Northeast Agricultural University
+ Northeast Agricultural University
+
+
+ Harbin
+
+
+ China
+
+
From 00127499a2642005cd68e027294469c81d212586 Mon Sep 17 00:00:00 2001
From: Sadik Muzemil <116672423+sadikmz@users.noreply.github.com>
Date: Wed, 1 Apr 2026 16:23:00 +0100
Subject: [PATCH 8/8] Add Plant Breeding and Acclimatization Institute contact
for Fusarium graminearum (PRJNA1199923) RNA-seq dataset. - Dataset: Fungicide
response transcriptomics (azoxystrobin and chitosan) - Organism: Fusarium
graminearum strain BW5 - Added Plant Breeding and Acclimatization Institute
contact to allContacts.xml - Submitting Institution: Plant Breeding and
Acclimatization Institute, Radzikow, Poland
---
.../contacts/allContacts.xml | 24 +++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
index dd908035..b0325ff9 100644
--- a/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
+++ b/Model/lib/xml/datasetPresenters/contacts/allContacts.xml
@@ -15,6 +15,18 @@
+
+ dave.berger
+ Dave K. Berger
+ Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, South Africa
+
+ Private Bag x20
+ Hatfield
+
+ 0028
+ South Africa
+
+
sylvain.raffaele
Sylvain Raffaele
@@ -40834,4 +40846,16 @@ Academy of Sciences
China
+
+ Plant Breeding and Acclimatization Institute
+ Plant Breeding and Acclimatization Institute
+ Plant Breeding and Acclimatization Institute (IHAR), Radzikow
+
+
+ Radzikow
+
+
+ Poland
+
+