SpatialPy/docs/build/html/genindex.html at fd5ecfe21ba0e0bcf84a9d73fa221ddb900a59f0 · StochSS/SpatialPy · GitHub

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<!DOCTYPE html>

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    <title>Index &#8212; SpatialPy 1.2.2 documentation</title>
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<h1 id="index">Index</h1>

<div class="genindex-jumpbox">
 <a href="#A"><strong>A</strong></a>
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 | <a href="#X"><strong>X</strong></a>

</div>
<h2 id="A">A</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add">add() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_boundary_condition">add_boundary_condition() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_boundary_condition">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_data_function">add_data_function() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_data_function">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_domain">add_domain() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_domain">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.add_fill_action">add_fill_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.add_fill_action">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_initial_condition">add_initial_condition() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_initial_condition">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_parameter">add_parameter() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_parameter">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.add_point">add_point() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.add_point">(spatialpy.core.domain.Domain method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Reaction.add_product">add_product() (spatialpy.core.Reaction method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.reaction.Reaction.add_product">(spatialpy.core.reaction.Reaction method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Reaction.add_reactant">add_reactant() (spatialpy.core.Reaction method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.reaction.Reaction.add_reactant">(spatialpy.core.reaction.Reaction method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_reaction">add_reaction() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_reaction">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.add_remove_action">add_remove_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.add_remove_action">(spatialpy.core.domain.Domain method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.add_set_action">add_set_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.add_set_action">(spatialpy.core.domain.Domain method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.add_species">add_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.add_species">(spatialpy.core.model.Model method)</a>
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      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Reaction.annotate">annotate() (spatialpy.core.Reaction method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.reaction.Reaction.annotate">(spatialpy.core.reaction.Reaction method)</a>
</li>
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      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.append">append() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.append">(spatialpy.core.result.Result method)</a>
</li>
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  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.CartesianLattice.apply">apply() (spatialpy.core.CartesianLattice method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.CylindricalLattice.apply">(spatialpy.core.CylindricalLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.InitialCondition.apply">(spatialpy.core.InitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.InitialCondition.apply">(spatialpy.core.initialcondition.InitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.PlaceInitialCondition.apply">(spatialpy.core.initialcondition.PlaceInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.ScatterInitialCondition.apply">(spatialpy.core.initialcondition.ScatterInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.UniformInitialCondition.apply">(spatialpy.core.initialcondition.UniformInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.CartesianLattice.apply">(spatialpy.core.lattice.CartesianLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.CylindricalLattice.apply">(spatialpy.core.lattice.CylindricalLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.Lattice.apply">(spatialpy.core.lattice.Lattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.MeshIOLattice.apply">(spatialpy.core.lattice.MeshIOLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.SphericalLattice.apply">(spatialpy.core.lattice.SphericalLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.StochSSLattice.apply">(spatialpy.core.lattice.StochSSLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.XMLMeshLattice.apply">(spatialpy.core.lattice.XMLMeshLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.MeshIOLattice.apply">(spatialpy.core.MeshIOLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.PlaceInitialCondition.apply">(spatialpy.core.PlaceInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.ScatterInitialCondition.apply">(spatialpy.core.ScatterInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.SphericalLattice.apply">(spatialpy.core.SphericalLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.StochSSLattice.apply">(spatialpy.core.StochSSLattice method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.Transformation.apply">(spatialpy.core.Transformation method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.transformation.Transformation.apply">(spatialpy.core.transformation.Transformation method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.UniformInitialCondition.apply">(spatialpy.core.UniformInitialCondition method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.XMLMeshLattice.apply">(spatialpy.core.XMLMeshLattice method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.apply_actions">apply_actions() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.apply_actions">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.apply_fill_action">apply_fill_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.apply_fill_action">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.apply_remove_action">apply_remove_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.apply_remove_action">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.apply_set_action">apply_set_action() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.apply_set_action">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.TimeSpan.arange">arange() (spatialpy.core.TimeSpan class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.timespan.TimeSpan.arange">(spatialpy.core.timespan.TimeSpan class method)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="B">B</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.BoundaryCondition">BoundaryCondition (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.boundarycondition.BoundaryCondition">(class in spatialpy.core.boundarycondition)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.BoundaryConditionError">BoundaryConditionError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.BoundaryConditionError">[1]</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression">BuildExpression (class in spatialpy.solvers.build_expression)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor">BuildExpression.ValidationVisitor (class in spatialpy.solvers.build_expression)</a>
</li>
  </ul></td>
</tr></table>

<h2 id="C">C</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.calculate_vol">calculate_vol() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.calculate_vol">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.CartesianLattice">CartesianLattice (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.CartesianLattice">(class in spatialpy.core.lattice)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup_build_files">cleanup_build_files() (in module spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup.cleanup_build_files">(in module spatialpy.core.cleanup)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup_core_files">cleanup_core_files() (in module spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup.cleanup_core_files">(in module spatialpy.core.cleanup)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup_result_files">cleanup_result_files() (in module spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup.cleanup_result_files">(in module spatialpy.core.cleanup)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup_tempfiles">cleanup_tempfiles() (in module spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.cleanup.cleanup_tempfiles">(in module spatialpy.core.cleanup)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.closest_vertex">closest_vertex() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.closest_vertex">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.CombinatoryGeometry">CombinatoryGeometry (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.CombinatoryGeometry">(class in spatialpy.core.geometry)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.solver.Solver.compile">compile() (spatialpy.solvers.solver.Solver method)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.compile_prep">compile_prep() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.compile_prep">(spatialpy.core.domain.Domain method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.compile_prep">(spatialpy.core.Model method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.compile_prep">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter.convert_str">convert_str() (spatialpy.solvers.build_expression.ExpressionConverter class method)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.coordinates">coordinates() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.coordinates">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.CppConverter">CppConverter (class in spatialpy.solvers.build_expression)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.CppConverter.CppExpressionTransformer">CppConverter.CppExpressionTransformer (class in spatialpy.solvers.build_expression)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.create_2D_domain">create_2D_domain() (spatialpy.core.Domain class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.create_2D_domain">(spatialpy.core.domain.Domain class method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.create_3D_domain">create_3D_domain() (spatialpy.core.Domain class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.create_3D_domain">(spatialpy.core.domain.Domain class method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.CylindricalLattice">CylindricalLattice (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.CylindricalLattice">(class in spatialpy.core.lattice)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="D">D</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.DataFunction">DataFunction (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.datafunction.DataFunction">(class in spatialpy.core.datafunction)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.DataFunctionError">DataFunctionError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.DataFunctionError">[1]</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_boundary_conditions">delete_all_boundary_conditions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_boundary_conditions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_data_functions">delete_all_data_functions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_data_functions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_initial_conditions">delete_all_initial_conditions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_initial_conditions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_parameters">delete_all_parameters() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_parameters">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_reactions">delete_all_reactions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_reactions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_all_species">delete_all_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_all_species">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_boundary_condition">delete_boundary_condition() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_boundary_condition">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_data_function">delete_data_function() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_data_function">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_initial_condition">delete_initial_condition() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_initial_condition">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_parameter">delete_parameter() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_parameter">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_reaction">delete_reaction() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_reaction">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.delete_species">delete_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.delete_species">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.distance_between_2_vertices">distance_between_2_vertices() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.distance_between_2_vertices">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain">Domain (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain">(class in spatialpy.core.domain)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.DomainError">DomainError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.DomainError">[1]</a>
</li>
  </ul></td>
</tr></table>

<h2 id="E">E</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.stochss.html#spatialpy.stochss.stochss_export.export">export() (in module spatialpy.stochss.stochss_export)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.export_StochSS">export_StochSS() (in module spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.export_StochSS">(in module spatialpy.core.model)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.export_to_csv">export_to_csv() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.export_to_csv">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.BoundaryCondition.expression">expression() (spatialpy.core.BoundaryCondition method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.boundarycondition.BoundaryCondition.expression">(spatialpy.core.boundarycondition.BoundaryCondition method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter">ExpressionConverter (class in spatialpy.solvers.build_expression)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionResults">ExpressionResults (class in spatialpy.solvers.build_expression)</a>
</li>
  </ul></td>
</tr></table>

<h2 id="F">F</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.fill_with_particles">fill_with_particles() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.fill_with_particles">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.find_boundary_points">find_boundary_points() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.find_boundary_points">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.find_h">find_h() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.find_h">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Reaction.from_json">from_json() (spatialpy.core.Reaction class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.reaction.Reaction.from_json">(spatialpy.core.reaction.Reaction class method)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="G">G</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Geometry">Geometry (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.Geometry">(class in spatialpy.core.geometry)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryAll">GeometryAll (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryAll">(class in spatialpy.core.geometry)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryError">GeometryError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.GeometryError">[1]</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryExterior">GeometryExterior (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryExterior">(class in spatialpy.core.geometry)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryInterior">GeometryInterior (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryInterior">(class in spatialpy.core.geometry)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_boundary_conditions">get_all_boundary_conditions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_boundary_conditions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_data_functions">get_all_data_functions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_data_functions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_initial_conditions">get_all_initial_conditions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_initial_conditions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_parameters">get_all_parameters() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_parameters">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_reactions">get_all_reactions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_reactions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_all_species">get_all_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_all_species">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.VTKReader.get_array_name">get_array_name() (spatialpy.core.VTKReader method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.vtkreader.VTKReader.get_array_name">(spatialpy.core.vtkreader.VTKReader method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.VTKReader.get_arrays">get_arrays() (spatialpy.core.VTKReader method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.vtkreader.VTKReader.get_arrays">(spatialpy.core.vtkreader.VTKReader method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.get_bounding_box">get_bounding_box() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.get_bounding_box">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_data_function">get_data_function() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_data_function">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.get_domain_size">get_domain_size() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.get_domain_size">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_element">get_element() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_element">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.VTKReader.get_num_points">get_num_points() (spatialpy.core.VTKReader method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.vtkreader.VTKReader.get_num_points">(spatialpy.core.vtkreader.VTKReader method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_num_reactions">get_num_reactions() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_num_reactions">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_num_species">get_num_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_num_species">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.get_num_voxels">get_num_voxels() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.get_num_voxels">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_parameter">get_parameter() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_parameter">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.VTKReader.get_points">get_points() (spatialpy.core.VTKReader method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.vtkreader.VTKReader.get_points">(spatialpy.core.vtkreader.VTKReader method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.get_property">get_property() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.get_property">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_reaction">get_reaction() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_reaction">(spatialpy.core.model.Model method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model.get_species">get_species() (spatialpy.core.Model method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model.get_species">(spatialpy.core.model.Model method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.get_species">(spatialpy.core.Result method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.get_species">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.CppConverter.get_str">get_str() (spatialpy.solvers.build_expression.CppConverter method)</a>

      <ul>
        <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter.get_str">(spatialpy.solvers.build_expression.ExpressionConverter method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.get_timespan">get_timespan() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.get_timespan">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.get_type_def">get_type_def() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.get_type_def">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.get_vol">get_vol() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.get_vol">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression.getexpr_cpp">getexpr_cpp() (spatialpy.solvers.build_expression.BuildExpression method)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression.getexpr_python">getexpr_python() (spatialpy.solvers.build_expression.BuildExpression method)</a>
</li>
  </ul></td>
</tr></table>

<h2 id="I">I</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.import_meshio_object">import_meshio_object() (spatialpy.core.Domain class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.import_meshio_object">(spatialpy.core.domain.Domain class method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.InitialCondition">InitialCondition (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.InitialCondition">(class in spatialpy.core.initialcondition)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.InitialConditionError">InitialConditionError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.InitialConditionError">[1]</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Reaction.initialize">initialize() (spatialpy.core.Reaction method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.reaction.Reaction.initialize">(spatialpy.core.reaction.Reaction method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.CombinatoryGeometry.inside">inside() (spatialpy.core.CombinatoryGeometry method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.Geometry.inside">(spatialpy.core.Geometry method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.CombinatoryGeometry.inside">(spatialpy.core.geometry.CombinatoryGeometry method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.Geometry.inside">(spatialpy.core.geometry.Geometry method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryAll.inside">(spatialpy.core.geometry.GeometryAll method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryExterior.inside">(spatialpy.core.geometry.GeometryExterior method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.geometry.GeometryInterior.inside">(spatialpy.core.geometry.GeometryInterior method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryAll.inside">(spatialpy.core.GeometryAll method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryExterior.inside">(spatialpy.core.GeometryExterior method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.GeometryInterior.inside">(spatialpy.core.GeometryInterior method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.Transformation.inside">(spatialpy.core.Transformation method)</a>
</li>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.transformation.Transformation.inside">(spatialpy.core.transformation.Transformation method)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="L">L</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.Lattice">Lattice (class in spatialpy.core.lattice)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.LatticeError">LatticeError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.LatticeError">[1]</a>
</li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.TimeSpan.linspace">linspace() (spatialpy.core.TimeSpan class method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.timespan.TimeSpan.linspace">(spatialpy.core.timespan.TimeSpan class method)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="M">M</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.DataFunction.map">map() (spatialpy.core.DataFunction method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.datafunction.DataFunction.map">(spatialpy.core.datafunction.DataFunction method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression.map_operator">map_operator() (spatialpy.solvers.build_expression.BuildExpression class method)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.MeshIOLattice">MeshIOLattice (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.lattice.MeshIOLattice">(class in spatialpy.core.lattice)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Model">Model (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.model.Model">(class in spatialpy.core.model)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.ModelError">ModelError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.ModelError">[1]</a>
</li>
      <li>
    module

      <ul>
        <li><a href="classes/spatialpy.html#module-spatialpy">spatialpy</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core">spatialpy.core</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.boundarycondition">spatialpy.core.boundarycondition</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.cleanup">spatialpy.core.cleanup</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.datafunction">spatialpy.core.datafunction</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.domain">spatialpy.core.domain</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.geometry">spatialpy.core.geometry</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.initialcondition">spatialpy.core.initialcondition</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.lattice">spatialpy.core.lattice</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.model">spatialpy.core.model</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.parameter">spatialpy.core.parameter</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.reaction">spatialpy.core.reaction</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.result">spatialpy.core.result</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.spatialpyerror">spatialpy.core.spatialpyerror</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.species">spatialpy.core.species</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.timespan">spatialpy.core.timespan</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.transformation">spatialpy.core.transformation</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.visualization">spatialpy.core.visualization</a>
</li>
        <li><a href="classes/spatialpy.core.html#module-spatialpy.core.vtkreader">spatialpy.core.vtkreader</a>
</li>
        <li><a href="classes/spatialpy.solvers.html#module-spatialpy.solvers">spatialpy.solvers</a>
</li>
        <li><a href="classes/spatialpy.solvers.html#module-spatialpy.solvers.build_expression">spatialpy.solvers.build_expression</a>
</li>
        <li><a href="classes/spatialpy.solvers.html#module-spatialpy.solvers.solver">spatialpy.solvers.solver</a>
</li>
        <li><a href="classes/spatialpy.stochss.html#module-spatialpy.stochss">spatialpy.stochss</a>
</li>
        <li><a href="classes/spatialpy.stochss.html#module-spatialpy.stochss.stochss_export">spatialpy.stochss.stochss_export</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Visualization.MPL_HEIGHT">MPL_HEIGHT (spatialpy.core.Visualization attribute)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.visualization.Visualization.MPL_HEIGHT">(spatialpy.core.visualization.Visualization attribute)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Visualization.MPL_SIZE">MPL_SIZE (spatialpy.core.Visualization attribute)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.visualization.Visualization.MPL_SIZE">(spatialpy.core.visualization.Visualization attribute)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Visualization.MPL_WIDTH">MPL_WIDTH (spatialpy.core.Visualization attribute)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.visualization.Visualization.MPL_WIDTH">(spatialpy.core.visualization.Visualization attribute)</a>
</li>
      </ul></li>
  </ul></td>
</tr></table>

<h2 id="O">O</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.BuildExpression.operator_map">operator_map (spatialpy.solvers.build_expression.BuildExpression attribute)</a>
</li>
  </ul></td>
</tr></table>

<h2 id="P">P</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Parameter">Parameter (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.parameter.Parameter">(class in spatialpy.core.parameter)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.ParameterError">ParameterError</a>, <a href="classes/spatialpy.core.html#spatialpy.core.spatialpyerror.ParameterError">[1]</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter.parse_comparison">parse_comparison() (spatialpy.solvers.build_expression.ExpressionConverter method)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter.parse_logical">parse_logical() (spatialpy.solvers.build_expression.ExpressionConverter method)</a>
</li>
      <li><a href="classes/spatialpy.solvers.html#spatialpy.solvers.build_expression.ExpressionConverter.parse_operator">parse_operator() (spatialpy.solvers.build_expression.ExpressionConverter method)</a>
</li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.PlaceInitialCondition">PlaceInitialCondition (class in spatialpy.core)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.initialcondition.PlaceInitialCondition">(class in spatialpy.core.initialcondition)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.plot_property">plot_property() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.plot_property">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
  </ul></td>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Visualization.plot_scatter">plot_scatter() (spatialpy.core.Visualization method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.visualization.Visualization.plot_scatter">(spatialpy.core.visualization.Visualization method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.plot_species">plot_species() (spatialpy.core.Result method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.plot_species">(spatialpy.core.result.Result method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.plot_types">plot_types() (spatialpy.core.Domain method)</a>

      <ul>
        <li><a href="classes/spatialpy.core.html#spatialpy.core.domain.Domain.plot_types">(spatialpy.core.domain.Domain method)</a>
</li>
      </ul></li>
      <li><a href="classes/spatialpy.core.html#spatialpy.core.Domain.preview_actions">preview_actions() (spatialpy.core.Domain method)</a>