Starter guide for working with SAFEHR-data
SAFEHR (Secure or Anonymised Framework for Electronic Health Records) is a collaborative cross UCLH-UCL team supporting data access and extraction for research.
This repository hosts a growing collection of documentation for working with UCLH clinical data.
Contributions are welcome, reach out & see the guide to contributing.
| Help file | language | content |
|---|---|---|
| 01-clinical-data-omop-intro | agnostic | intro to clinical data & OMOP |
| 02-omop-walkthrough-critical-care | R | reading in UCLH synthetic data in OMOP format & first exploration |
| 02B-Python-Omop-walkthrough-critical-care | Python | as above |
| 03-drugs-uclh-omop | R | how drug data are stored in UCLH, standardised to OMOP, and can be classified to groups (using ATC) |