echodata: Examples of fine-mapped GWAS summary statistics, data formatting functions, and API access to the echolocatoR Fine-mapping Portal.
This R package is part of the echoverse suite that supports
echolocatoR: an automated
genomic fine-mapping pipeline.
If you use echodata, please cite:
Brian M Schilder, Jack Humphrey, Towfique Raj (2021) echolocatoR: an automated end-to-end statistical and functional genomic fine-mapping pipeline, Bioinformatics; btab658, https://doi.org/10.1093/bioinformatics/btab658
if(!require("BiocManager")) install.packages("BiocManager")
BiocManager::install("RajLabMSSM/echodata")
library(echodata)Brian
M. Schilder, Bioinformatician II
Raj Lab
Department
of Neuroscience, Icahn School of Medicine at Mount Sinai