Docs @ 8603b3b

Author: MFC Action

documentation/architecture.html

@@ -427,7 +427,7 @@ <h1 class="doxsection"><a class="anchor" id="autotoc_md13"></a>
 <li><b>Add the module to <span class="tt">docs/module_categories.json</span></b> so it appears in this page</li>
 </ol>
 <p>Follow the pattern of existing modules like <span class="tt">m_body_forces</span> (simple) or <span class="tt">m_viscous</span> (more involved) as a template.</p>
-<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
+<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-20</div> </div></div><!-- contents -->
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documentation/case_constraints.html

@@ -1462,7 +1462,7 @@ <h2 class="doxsection"><a class="anchor" id="physics-warnings"></a>
 </table>
 <hr  />
 <p>💡 <b>Tip:</b> If you encounter a validation error, check the relevant section above or review <a href="https://github.com/MFlowCode/MFC/blob/master/toolchain/mfc/case_validator.py"><span class="tt">case_validator.py</span></a> for complete validation logic.</p>
-<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
+<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-20</div> </div></div><!-- contents -->
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 </div><!-- doc-content -->
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documentation/cli-reference.html

@@ -999,7 +999,7 @@ <h3 class="doxsection"><a class="anchor" id="autotoc_md82"></a>
 <h3 class="doxsection"><a class="anchor" id="autotoc_md83"></a>
 Debug Logging (<span class="tt">-d, --debug-log</span>)</h3>
 <p>Enables debug logging for the Python toolchain (mfc.sh internals). This is for troubleshooting the build system, not the MFC simulation code.</p>
-<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
+<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-20</div> </div></div><!-- contents -->
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documentation/examples.html

@@ -630,7 +630,7 @@ <h2 class="doxsection"><a class="anchor" id="autotoc_md313"></a>
 <h3 class="doxsection"><a class="anchor" id="autotoc_md314"></a>
 Liutex visualization at transitional state</h3>
 <p><img src="result-3D_turb_mixing-example.png" alt="" height="400" class="inline"/></p>
-<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
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documentation/parameters.html

@@ -1721,7 +1721,7 @@ <h2 class="doxsection"><a class="anchor" id="autotoc_md447"></a>
 <div class="line"> </div>
 <div class="line"># Filter by type</div>
 <div class="line">./mfc.sh params -t real weno</div>
-</div><!-- fragment --><div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
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documentation/physics_constraints.html

@@ -674,7 +674,7 @@ <h3 class="doxsection"><a class="anchor" id="autotoc_md501"></a>
 <li><code class="f90l">patch_icpp(i)%</code><code class="f90r">hcid</code>=hcid requires <span class="tt">files_dir</span> to be set</li>
 <li><code class="f90l">patch_icpp(i)%</code><code class="f90r">hcid</code>=hcid requires <span class="tt">file_extension</span> to be set</li>
 </ul>
-<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-19</div> </div></div><!-- contents -->
+<div style="text-align:center; font-size:0.75rem; color:#888; padding:16px 0 0;">Page last updated: 2026-07-20</div> </div></div><!-- contents -->
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post_process/doxygen_crawl.html

@@ -752,20 +752,17 @@
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post_process/m__boundary__common_8fpp_8f90_source.html

@@ -1666,9 +1666,9 @@
 <div class="line"><a id="l01505" name="l01505"></a><span class="lineno"> 1505</span>    <span class="keyword">end subroutine </span><a class="code hl_function" href="namespacem__boundary__common.html#a3ff6536d3b88213b0e72542f1b8ff7a4">s_populate_beta_bc_direction</a></div>
 <div class="line"><a id="l01506" name="l01506"></a><span class="lineno"> 1506</span> </div>
 <div class="line"><a id="l01507" name="l01507"></a><span class="lineno"> 1507</span><span class="keyword">end module </span><a class="code hl_namespace" href="namespacem__boundary__common.html">m_boundary_common</a></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ab59687ec5969af6d5b7b9ba5cf2835aa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ab59687ec5969af6d5b7b9ba5cf2835aa">k</a></div><div class="ttdeci">integer, intent(in) k</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ace2eaec12668a4d4eedb46c8c99c94f2"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ace2eaec12668a4d4eedb46c8c99c94f2">j</a></div><div class="ttdeci">integer, intent(in) j</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ab59687ec5969af6d5b7b9ba5cf2835aa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ab59687ec5969af6d5b7b9ba5cf2835aa">k</a></div><div class="ttdeci">integer, intent(in) k</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ace2eaec12668a4d4eedb46c8c99c94f2"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ace2eaec12668a4d4eedb46c8c99c94f2">j</a></div><div class="ttdeci">integer, intent(in) j</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
 <div class="ttc" id="anamespacem__boundary__common_html"><div class="ttname"><a href="namespacem__boundary__common.html">m_boundary_common</a></div><div class="ttdoc">Noncharacteristic and processor boundary condition application for ghost cells and buffer regions.</div><div class="ttdef"><b>Definition</b> <a href="#l00334">m_boundary_common.fpp.f90:334</a></div></div>
 <div class="ttc" id="anamespacem__boundary__common_html_a352fa827d9dbbfb0be060dedcce86792"><div class="ttname"><a href="namespacem__boundary__common.html#a352fa827d9dbbfb0be060dedcce86792">m_boundary_common::s_populate_bc_direction</a></div><div class="ttdeci">impure subroutine s_populate_bc_direction(bc_dir, bc_loc, bc_bounds, bc_type_edge, q_prim_vf, pb_in, mv_in, q_t_sf)</div><div class="ttdoc">Populate the variable buffers along one direction and location, via MPI exchange for processor bounda...</div><div class="ttdef"><b>Definition</b> <a href="#l00738">m_boundary_common.fpp.f90:739</a></div></div>
 <div class="ttc" id="anamespacem__boundary__common_html_a3ae990b28166105211eb26fe8360880c"><div class="ttname"><a href="namespacem__boundary__common.html#a3ae990b28166105211eb26fe8360880c">m_boundary_common::s_populate_capillary_bc_direction</a></div><div class="ttdeci">impure subroutine s_populate_capillary_bc_direction(bc_dir, bc_loc, bc_bounds, bc_type_edge, c_divs)</div><div class="ttdoc">Populate ghost cell buffers for one capillary BC direction and location, via MPI exchange for process...</div><div class="ttdef"><b>Definition</b> <a href="#l00865">m_boundary_common.fpp.f90:866</a></div></div>

post_process/m__data__output_8fpp_8f90_source.html

@@ -1846,10 +1846,10 @@
 <div class="line"><a id="l01671" name="l01671"></a><span class="lineno"> 1671</span>    <span class="keyword">end subroutine </span><a class="code hl_function" href="namespacem__data__output.html#a891723f10ca7d4345bd44bf387f6bd2e">s_finalize_data_output_module</a></div>
 <div class="line"><a id="l01672" name="l01672"></a><span class="lineno"> 1672</span> </div>
 <div class="line"><a id="l01673" name="l01673"></a><span class="lineno"> 1673</span><span class="keyword">end module </span><a class="code hl_namespace" href="namespacem__data__output.html">m_data_output</a></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_a6d2af1366163bbea81771912d405abfa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#a6d2af1366163bbea81771912d405abfa">q_cons_vf</a></div><div class="ttdeci">type(scalar_field), dimension(sys_size), intent(inout) q_cons_vf</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01080">m_phase_change.fpp.f90:1080</a></div></div>
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-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_a6d2af1366163bbea81771912d405abfa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#a6d2af1366163bbea81771912d405abfa">q_cons_vf</a></div><div class="ttdeci">type(scalar_field), dimension(sys_size), intent(inout) q_cons_vf</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00988">m_phase_change.fpp.f90:988</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ab59687ec5969af6d5b7b9ba5cf2835aa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ab59687ec5969af6d5b7b9ba5cf2835aa">k</a></div><div class="ttdeci">integer, intent(in) k</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ace2eaec12668a4d4eedb46c8c99c94f2"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ace2eaec12668a4d4eedb46c8c99c94f2">j</a></div><div class="ttdeci">integer, intent(in) j</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
 <div class="ttc" id="anamespacem__compile__specific_html"><div class="ttname"><a href="namespacem__compile__specific.html">m_compile_specific</a></div><div class="ttdoc">Platform-specific file and directory operations: create, delete, inquire, getcwd, and basename.</div><div class="ttdef"><b>Definition</b> <a href="m__compile__specific_8f90_source.html#l00006">m_compile_specific.f90:6</a></div></div>
 <div class="ttc" id="anamespacem__compile__specific_html_a9cf8c029e502931415929734c03f340d"><div class="ttname"><a href="namespacem__compile__specific.html#a9cf8c029e502931415929734c03f340d">m_compile_specific::my_inquire</a></div><div class="ttdeci">impure subroutine my_inquire(fileloc, dircheck)</div><div class="ttdoc">Inquire on the existence of a directory or file.</div><div class="ttdef"><b>Definition</b> <a href="m__compile__specific_8f90_source.html#l00055">m_compile_specific.f90:56</a></div></div>
 <div class="ttc" id="anamespacem__compile__specific_html_aa1b4e12a20e09147a215c3b5018484b0"><div class="ttname"><a href="namespacem__compile__specific.html#aa1b4e12a20e09147a215c3b5018484b0">m_compile_specific::s_create_directory</a></div><div class="ttdeci">impure subroutine s_create_directory(dir_name)</div><div class="ttdoc">Create a directory and all its parents if it does not exist.</div><div class="ttdef"><b>Definition</b> <a href="m__compile__specific_8f90_source.html#l00016">m_compile_specific.f90:17</a></div></div>

post_process/m__derived__types_8fpp_8f90_source.html

@@ -1102,9 +1102,9 @@
 <div class="line"><a id="l00872" name="l00872"></a><span class="lineno">  872</span>    <span class="keyword">end type </span><a class="code hl_struct" href="structm__derived__types_1_1simplex__noise__params.html">simplex_noise_params</a></div>
 </div>
 <div class="line"><a id="l00873" name="l00873"></a><span class="lineno">  873</span><span class="keyword">end module </span><a class="code hl_namespace" href="namespacem__derived__types.html">m_derived_types</a></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_a6d2af1366163bbea81771912d405abfa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#a6d2af1366163bbea81771912d405abfa">q_cons_vf</a></div><div class="ttdeci">type(scalar_field), dimension(sys_size), intent(inout) q_cons_vf</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01080">m_phase_change.fpp.f90:1080</a></div></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ab59687ec5969af6d5b7b9ba5cf2835aa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ab59687ec5969af6d5b7b9ba5cf2835aa">k</a></div><div class="ttdeci">integer, intent(in) k</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
-<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l01082">m_phase_change.fpp.f90:1082</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_a6d2af1366163bbea81771912d405abfa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#a6d2af1366163bbea81771912d405abfa">q_cons_vf</a></div><div class="ttdeci">type(scalar_field), dimension(sys_size), intent(inout) q_cons_vf</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00988">m_phase_change.fpp.f90:988</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ab59687ec5969af6d5b7b9ba5cf2835aa"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ab59687ec5969af6d5b7b9ba5cf2835aa">k</a></div><div class="ttdeci">integer, intent(in) k</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
+<div class="ttc" id="am__phase__change_8fpp_8f90_html_ae9acc6b70aad4473254a118fe7e38e72"><div class="ttname"><a href="m__phase__change_8fpp_8f90.html#ae9acc6b70aad4473254a118fe7e38e72">l</a></div><div class="ttdeci">integer, intent(in) l</div><div class="ttdef"><b>Definition</b> <a href="m__phase__change_8fpp_8f90_source.html#l00990">m_phase_change.fpp.f90:990</a></div></div>
 <div class="ttc" id="anamespacem__constants_html"><div class="ttname"><a href="namespacem__constants.html">m_constants</a></div><div class="ttdoc">Compile-time constant parameters: default values, tolerances, and physical constants.</div><div class="ttdef"><b>Definition</b> <a href="m__constants_8fpp_8f90_source.html#l00007">m_constants.fpp.f90:7</a></div></div>
 <div class="ttc" id="anamespacem__constants_html_a53cf8dfd06fcfa36c018ab624ef988b6"><div class="ttname"><a href="namespacem__constants.html#a53cf8dfd06fcfa36c018ab624ef988b6">m_constants::dflt_real</a></div><div class="ttdeci">real(wp), parameter dflt_real</div><div class="ttdoc">Default real value.</div><div class="ttdef"><b>Definition</b> <a href="m__constants_8fpp_8f90_source.html#l00012">m_constants.fpp.f90:12</a></div></div>
 <div class="ttc" id="anamespacem__derived__types_html"><div class="ttname"><a href="namespacem__derived__types.html">m_derived_types</a></div><div class="ttdoc">Shared derived types for field data, patch geometry, bubble dynamics, and MPI I/O structures.</div><div class="ttdef"><b>Definition</b> <a href="#l00323">m_derived_types.fpp.f90:323</a></div></div>